Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.56□□□□□ -2
GDNFP39905 SNORA7.4-201ENST00000384249 137 ntBASIC2.55□□□□□ -2
GDNFP39905 SNORD38C-201ENST00000384381 69 ntBASIC2.55□□□□□ -2
GDNFP39905 Y_RNA.494-201ENST00000384432 111 ntBASIC2.55□□□□□ -2
GDNFP39905 Y_RNA.507-201ENST00000384500 99 ntBASIC2.55□□□□□ -2
GDNFP39905 Y_RNA.601-201ENST00000410500 113 ntBASIC2.55□□□□□ -2
GDNFP39905 RNA5SP144-201ENST00000410846 116 ntBASIC2.55□□□□□ -2
GDNFP39905 RNA5SP492-201ENST00000411330 114 ntBASIC2.55□□□□□ -2
GDNFP39905 STAG3L5P-204ENST00000443759 179 ntBASIC2.55□□□□□ -2
GDNFP39905 AC109327.2-201ENST00000448339 378 ntBASIC2.55□□□□□ -2
GDNFP39905 AL049873.1-201ENST00000480540 376 ntBASIC2.55□□□□□ -2
GDNFP39905 RNU6-795P-201ENST00000516323 103 ntBASIC2.55□□□□□ -2
GDNFP39905 AC004812.1-201ENST00000540773 146 ntBASIC2.55□□□□□ -2
GDNFP39905 AC107016.2-201ENST00000547968 190 ntBASIC2.55□□□□□ -2
GDNFP39905 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.55□□□□□ -2
GDNFP39905 AC007318.2-201ENST00000620999 243 ntBASIC2.55□□□□□ -2
GDNFP39905 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.55□□□□□ -2
GDNFP39905 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
GDNFP39905 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.55□□□□□ -2
GDNFP39905 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
GDNFP39905 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.54□□□□□ -2
GDNFP39905 VTRNA1-1-201ENST00000363120 99 ntBASIC2.54□□□□□ -2
GDNFP39905 Y_RNA.155-201ENST00000363632 101 ntBASIC2.54□□□□□ -2
GDNFP39905 SNORA25.6-201ENST00000364121 118 ntBASIC2.54□□□□□ -2
GDNFP39905 Y_RNA.219-201ENST00000364232 113 ntBASIC2.54□□□□□ -2
GDNFP39905 RNU6-163P-201ENST00000384396 106 ntBASIC2.54□□□□□ -2
GDNFP39905 MIR491-201ENST00000384877 84 ntBASIC2.54□□□□□ -2
GDNFP39905 MIR23A-201ENST00000385245 73 ntBASIC2.54□□□□□ -2
GDNFP39905 AL035398.1-201ENST00000430869 322 ntBASIC2.54□□□□□ -2
GDNFP39905 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.54□□□□□ -2
GDNFP39905 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.54□□□□□ -2
GDNFP39905 RPS23P4-201ENST00000487908 423 ntBASIC2.54□□□□□ -2
GDNFP39905 AC091826.1-201ENST00000514065 313 ntBASIC2.54□□□□□ -2
GDNFP39905 RNU6-162P-201ENST00000516228 103 ntBASIC2.54□□□□□ -2
GDNFP39905 FAM71BP1-201ENST00000604431 523 ntBASIC2.54□□□□□ -2
GDNFP39905 AL161756.2-201ENST00000604597 246 ntBASIC2.54□□□□□ -2
GDNFP39905 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.54□□□□□ -2
GDNFP39905 MIR203B-201ENST00000636080 86 ntBASIC2.54□□□□□ -2
GDNFP39905 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.54□□□□□ -2
GDNFP39905 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.54□□□□□ -2
GDNFP39905 AC009487.2-201ENST00000420969 6821 ntBASIC2.54□□□□□ -2
GDNFP39905 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.54□□□□□ -2
GDNFP39905 SNORA38.1-201ENST00000364172 131 ntBASIC2.53□□□□□ -2
GDNFP39905 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
GDNFP39905 RNU1-109P-201ENST00000383960 147 ntBASIC2.53□□□□□ -2
GDNFP39905 SNORA54-201ENST00000384281 123 ntBASIC2.53□□□□□ -2
GDNFP39905 SNORD15B-201ENST00000384714 146 ntBASIC2.53□□□□□ -2
GDNFP39905 MIR483-201ENST00000385070 76 ntBASIC2.53□□□□□ -2
GDNFP39905 MIR577-201ENST00000385196 96 ntBASIC2.53□□□□□ -2
GDNFP39905 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.53□□□□□ -2
GDNFP39905 RNU6-644P-201ENST00000391155 98 ntBASIC2.53□□□□□ -2
GDNFP39905 RNU4-47P-201ENST00000410876 114 ntBASIC2.53□□□□□ -2
GDNFP39905 Z92545.1-201ENST00000411782 234 ntBASIC2.53□□□□□ -2
GDNFP39905 AL022718.1-201ENST00000412004 84 ntBASIC2.53□□□□□ -2
GDNFP39905 RNU7-28P-201ENST00000516759 62 ntBASIC2.53□□□□□ -2
GDNFP39905 RNU6-826P-201ENST00000516827 104 ntBASIC2.53□□□□□ -2
GDNFP39905 AC022254.1-201ENST00000567857 235 ntBASIC2.53□□□□□ -2
GDNFP39905 MIR3169-201ENST00000578032 83 ntBASIC2.53□□□□□ -2
GDNFP39905 AC012531.4-201ENST00000616509 177 ntBASIC2.53□□□□□ -2
GDNFP39905 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.53□□□□□ -2
GDNFP39905 AC021613.1-201ENST00000623880 111 ntBASIC2.53□□□□□ -2
GDNFP39905 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.53□□□□□ -2
GDNFP39905 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
GDNFP39905 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.53□□□□□ -2
GDNFP39905 MAPK10-266ENST00000641066 6555 ntBASIC2.52□□□□□ -2.01
GDNFP39905 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.52□□□□□ -2.01
GDNFP39905 RNU6-661P-201ENST00000362409 107 ntBASIC2.52□□□□□ -2.01
GDNFP39905 RNU6-363P-201ENST00000362895 105 ntBASIC2.52□□□□□ -2.01
GDNFP39905 RNA5SP374-201ENST00000362939 125 ntBASIC2.52□□□□□ -2.01
GDNFP39905 RNU6-461P-201ENST00000364195 107 ntBASIC2.52□□□□□ -2.01
GDNFP39905 Y_RNA.360-201ENST00000365512 102 ntBASIC2.52□□□□□ -2.01
GDNFP39905 RNU6-409P-201ENST00000384114 104 ntBASIC2.52□□□□□ -2.01
GDNFP39905 SNORA9-201ENST00000384215 133 ntBASIC2.52□□□□□ -2.01
GDNFP39905 MIR605-201ENST00000385078 83 ntBASIC2.52□□□□□ -2.01
GDNFP39905 RNU6-733P-201ENST00000410759 104 ntBASIC2.52□□□□□ -2.01
GDNFP39905 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.52□□□□□ -2.01
GDNFP39905 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.52□□□□□ -2.01
GDNFP39905 RNU7-45P-201ENST00000459460 63 ntBASIC2.52□□□□□ -2.01
GDNFP39905 RNU6-998P-201ENST00000515894 101 ntBASIC2.52□□□□□ -2.01
GDNFP39905 MIR5004-201ENST00000579078 107 ntBASIC2.52□□□□□ -2.01
GDNFP39905 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.52□□□□□ -2.01
GDNFP39905 MIR548Z-201ENST00000584743 97 ntBASIC2.52□□□□□ -2.01
GDNFP39905 YPEL5P2-201ENST00000605553 359 ntBASIC2.52□□□□□ -2.01
GDNFP39905 MIR8054-201ENST00000620877 86 ntBASIC2.52□□□□□ -2.01
GDNFP39905 AC064859.1-201ENST00000624741 174 ntBASIC2.52□□□□□ -2.01
GDNFP39905 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.52□□□□□ -2.01
GDNFP39905 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
GDNFP39905 AL035425.3-201ENST00000564206 4996 ntBASIC2.51□□□□□ -2.01
GDNFP39905 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
GDNFP39905 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.51□□□□□ -2.01
GDNFP39905 MIRLET7C-201ENST00000362160 84 ntBASIC2.51□□□□□ -2.01
GDNFP39905 Y_RNA.10-201ENST00000362371 110 ntBASIC2.51□□□□□ -2.01
GDNFP39905 RNU6-23P-201ENST00000363283 107 ntBASIC2.51□□□□□ -2.01
GDNFP39905 RNU6-832P-201ENST00000363319 107 ntBASIC2.51□□□□□ -2.01
GDNFP39905 SNORA4.2-201ENST00000365313 147 ntBASIC2.51□□□□□ -2.01
GDNFP39905 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.51□□□□□ -2.01
GDNFP39905 RNU7-96P-201ENST00000459535 64 ntBASIC2.51□□□□□ -2.01
GDNFP39905 AC008885.1-201ENST00000514930 301 ntBASIC2.51□□□□□ -2.01
GDNFP39905 RNU7-181P-201ENST00000517234 74 ntBASIC2.51□□□□□ -2.01
GDNFP39905 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms