Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.41□□□□□ -2.02
HOXC12P31275 CYCTP-201ENST00000504253 315 ntBASIC2.41□□□□□ -2.02
HOXC12P31275 AC008413.1-201ENST00000511864 177 ntBASIC2.41□□□□□ -2.02
HOXC12P31275 RNU5E-3P-201ENST00000515913 68 ntBASIC2.41□□□□□ -2.02
HOXC12P31275 RNU4-57P-201ENST00000515980 135 ntBASIC2.41□□□□□ -2.02
HOXC12P31275 RNU6-1333P-201ENST00000516162 93 ntBASIC2.41□□□□□ -2.02
HOXC12P31275 RNU7-25P-201ENST00000516544 62 ntBASIC2.41□□□□□ -2.02
HOXC12P31275 RNA5SP437-201ENST00000517249 129 ntBASIC2.41□□□□□ -2.02
HOXC12P31275 MIR3670-2-201ENST00000582974 65 ntBASIC2.41□□□□□ -2.02
HOXC12P31275 MIR3670-1-201ENST00000584160 65 ntBASIC2.41□□□□□ -2.02
HOXC12P31275 MIR3670-3-201ENST00000584855 65 ntBASIC2.41□□□□□ -2.02
HOXC12P31275 MIR3670-4-201ENST00000612260 65 ntBASIC2.41□□□□□ -2.02
HOXC12P31275 AC064859.1-201ENST00000624741 174 ntBASIC2.41□□□□□ -2.02
HOXC12P31275 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.41□□□□□ -2.02
HOXC12P31275 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HOXC12P31275 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
HOXC12P31275 MIRLET7C-201ENST00000362160 84 ntBASIC2.4□□□□□ -2.03
HOXC12P31275 Y_RNA.52-201ENST00000362760 96 ntBASIC2.4□□□□□ -2.03
HOXC12P31275 Y_RNA.127-201ENST00000363386 109 ntBASIC2.4□□□□□ -2.03
HOXC12P31275 RNU6-80P-201ENST00000384195 107 ntBASIC2.4□□□□□ -2.03
HOXC12P31275 RNU6-296P-201ENST00000384608 107 ntBASIC2.4□□□□□ -2.03
HOXC12P31275 SNORA67.4-201ENST00000384688 142 ntBASIC2.4□□□□□ -2.03
HOXC12P31275 RNU6-1031P-201ENST00000384773 107 ntBASIC2.4□□□□□ -2.03
HOXC12P31275 MIR144-201ENST00000384886 86 ntBASIC2.4□□□□□ -2.03
HOXC12P31275 SNORD77.3-201ENST00000391113 65 ntBASIC2.4□□□□□ -2.03
HOXC12P31275 U8.16-201ENST00000391279 133 ntBASIC2.4□□□□□ -2.03
HOXC12P31275 SNRPGP14-201ENST00000435400 219 ntBASIC2.4□□□□□ -2.03
HOXC12P31275 AF228730.3-201ENST00000436691 102 ntBASIC2.4□□□□□ -2.03
HOXC12P31275 RNA5SP24-201ENST00000516478 95 ntBASIC2.4□□□□□ -2.03
HOXC12P31275 SCARNA16.3-201ENST00000516595 184 ntBASIC2.4□□□□□ -2.03
HOXC12P31275 Y_RNA.690-201ENST00000516603 95 ntBASIC2.4□□□□□ -2.03
HOXC12P31275 RNA5SP168-201ENST00000516642 112 ntBASIC2.4□□□□□ -2.03
HOXC12P31275 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.4□□□□□ -2.03
HOXC12P31275 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
HOXC12P31275 SNORD116-14-201ENST00000383894 92 ntBASIC2.39□□□□□ -2.03
HOXC12P31275 SNORD116-17-201ENST00000383929 92 ntBASIC2.39□□□□□ -2.03
HOXC12P31275 SNORD116-15-201ENST00000384445 92 ntBASIC2.39□□□□□ -2.03
HOXC12P31275 SNORD116-19-201ENST00000384729 92 ntBASIC2.39□□□□□ -2.03
HOXC12P31275 RNU7-34P-201ENST00000459394 64 ntBASIC2.39□□□□□ -2.03
HOXC12P31275 AC003982.1-202ENST00000469928 248 ntBASIC2.39□□□□□ -2.03
HOXC12P31275 RNU7-12P-201ENST00000516030 62 ntBASIC2.39□□□□□ -2.03
HOXC12P31275 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.39□□□□□ -2.03
HOXC12P31275 SNORD53-201ENST00000579969 78 ntBASIC2.39□□□□□ -2.03
HOXC12P31275 AC134878.1-201ENST00000619901 243 ntBASIC2.39□□□□□ -2.03
HOXC12P31275 AC027279.3-201ENST00000625055 122 ntBASIC2.39□□□□□ -2.03
HOXC12P31275 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
HOXC12P31275 Y_RNA.547-201ENST00000384654 119 ntBASIC2.38□□□□□ -2.03
HOXC12P31275 RNA5SP210-201ENST00000391034 120 ntBASIC2.38□□□□□ -2.03
HOXC12P31275 MIR891A-201ENST00000401237 79 ntBASIC2.38□□□□□ -2.03
HOXC12P31275 snoU13.15-201ENST00000459407 104 ntBASIC2.38□□□□□ -2.03
HOXC12P31275 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.38□□□□□ -2.03
HOXC12P31275 RNA5SP481-201ENST00000516814 122 ntBASIC2.38□□□□□ -2.03
HOXC12P31275 RNU2-60P-201ENST00000517290 128 ntBASIC2.38□□□□□ -2.03
HOXC12P31275 MIR4709-201ENST00000577272 72 ntBASIC2.38□□□□□ -2.03
HOXC12P31275 MIR6817-201ENST00000615588 66 ntBASIC2.38□□□□□ -2.03
HOXC12P31275 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
HOXC12P31275 ZNF658B-202ENST00000615961 3375 ntBASIC2.38□□□□□ -2.03
HOXC12P31275 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
HOXC12P31275 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.37□□□□□ -2.03
HOXC12P31275 SNORD115-28-201ENST00000363931 81 ntBASIC2.37□□□□□ -2.03
HOXC12P31275 RNU1-112P-201ENST00000364401 164 ntBASIC2.37□□□□□ -2.03
HOXC12P31275 RNU6-309P-201ENST00000364573 106 ntBASIC2.37□□□□□ -2.03
HOXC12P31275 RNU6-424P-201ENST00000384367 105 ntBASIC2.37□□□□□ -2.03
HOXC12P31275 SNORD38C-201ENST00000384381 69 ntBASIC2.37□□□□□ -2.03
HOXC12P31275 AL603914.1-201ENST00000401964 204 ntBASIC2.37□□□□□ -2.03
HOXC12P31275 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC12P31275 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.37□□□□□ -2.03
HOXC12P31275 snoU13.27-201ENST00000459278 104 ntBASIC2.37□□□□□ -2.03
HOXC12P31275 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.37□□□□□ -2.03
HOXC12P31275 SNORA31.11-201ENST00000516528 139 ntBASIC2.37□□□□□ -2.03
HOXC12P31275 MIR3121-201ENST00000579680 77 ntBASIC2.37□□□□□ -2.03
HOXC12P31275 MIR4635-201ENST00000583759 79 ntBASIC2.37□□□□□ -2.03
HOXC12P31275 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.37□□□□□ -2.03
HOXC12P31275 AC015726.2-201ENST00000620112 122 ntBASIC2.37□□□□□ -2.03
HOXC12P31275 MTND5P32-201ENST00000560711 1802 ntBASIC2.37□□□□□ -2.03
HOXC12P31275 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HOXC12P31275 RNU6-235P-201ENST00000362644 107 ntBASIC2.36□□□□□ -2.03
HOXC12P31275 RNU6-1290P-201ENST00000362957 109 ntBASIC2.36□□□□□ -2.03
HOXC12P31275 U8.2-201ENST00000363156 134 ntBASIC2.36□□□□□ -2.03
HOXC12P31275 RNU6-508P-201ENST00000363231 103 ntBASIC2.36□□□□□ -2.03
HOXC12P31275 SNORD88.1-201ENST00000408684 91 ntBASIC2.36□□□□□ -2.03
HOXC12P31275 RNA5SP100-201ENST00000410903 110 ntBASIC2.36□□□□□ -2.03
HOXC12P31275 RNA5SP59-201ENST00000410922 110 ntBASIC2.36□□□□□ -2.03
HOXC12P31275 RPS29P6-201ENST00000438196 145 ntBASIC2.36□□□□□ -2.03
HOXC12P31275 MTATP6P21-201ENST00000440681 189 ntBASIC2.36□□□□□ -2.03
HOXC12P31275 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.36□□□□□ -2.03
HOXC12P31275 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HOXC12P31275 AL359881.1-201ENST00000602916 267 ntBASIC2.36□□□□□ -2.03
HOXC12P31275 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.36□□□□□ -2.03
HOXC12P31275 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.36□□□□□ -2.03
HOXC12P31275 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.36□□□□□ -2.03
HOXC12P31275 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.36□□□□□ -2.03
HOXC12P31275 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HOXC12P31275 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HOXC12P31275 Y_RNA.37-201ENST00000362606 108 ntBASIC2.35□□□□□ -2.03
HOXC12P31275 Y_RNA.410-201ENST00000383992 113 ntBASIC2.35□□□□□ -2.03
HOXC12P31275 RNA5SP57-201ENST00000459463 123 ntBASIC2.35□□□□□ -2.03
HOXC12P31275 RNA5SP148-201ENST00000516527 94 ntBASIC2.35□□□□□ -2.03
HOXC12P31275 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXC12P31275 AC021506.2-201ENST00000612354 169 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 186.6 ms