Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 Y_RNA.432-201ENST00000384087 111 ntBASIC1.86□□□□□ -2.11
EPHA3P29320 Y_RNA.486-201ENST00000384398 107 ntBASIC1.86□□□□□ -2.11
EPHA3P29320 MIR802-201ENST00000390235 94 ntBASIC1.86□□□□□ -2.11
EPHA3P29320 RNA5SP233-201ENST00000459153 113 ntBASIC1.86□□□□□ -2.11
EPHA3P29320 AC022254.1-201ENST00000567857 235 ntBASIC1.86□□□□□ -2.11
EPHA3P29320 AC087685.1-201ENST00000587507 141 ntBASIC1.86□□□□□ -2.11
EPHA3P29320 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
EPHA3P29320 AC012493.3-201ENST00000604494 112 ntBASIC1.86□□□□□ -2.11
EPHA3P29320 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.86□□□□□ -2.11
EPHA3P29320 Y_RNA.91-201ENST00000363042 107 ntBASIC1.85□□□□□ -2.11
EPHA3P29320 SNORD14E-201ENST00000364009 85 ntBASIC1.85□□□□□ -2.11
EPHA3P29320 RN7SKP223-201ENST00000410582 62 ntBASIC1.85□□□□□ -2.11
EPHA3P29320 RNU2-70P-201ENST00000410718 179 ntBASIC1.85□□□□□ -2.11
EPHA3P29320 RNU2-40P-201ENST00000410833 196 ntBASIC1.85□□□□□ -2.11
EPHA3P29320 RNU2-55P-201ENST00000411146 174 ntBASIC1.85□□□□□ -2.11
EPHA3P29320 AC006461.1-201ENST00000412637 326 ntBASIC1.85□□□□□ -2.11
EPHA3P29320 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.85□□□□□ -2.11
EPHA3P29320 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.85□□□□□ -2.11
EPHA3P29320 AC093850.1-201ENST00000454121 251 ntBASIC1.85□□□□□ -2.11
EPHA3P29320 CYCTP-201ENST00000504253 315 ntBASIC1.85□□□□□ -2.11
EPHA3P29320 RNU7-12P-201ENST00000516030 62 ntBASIC1.85□□□□□ -2.11
EPHA3P29320 MIR514B-201ENST00000516774 80 ntBASIC1.85□□□□□ -2.11
EPHA3P29320 MIR4431-201ENST00000579990 94 ntBASIC1.85□□□□□ -2.11
EPHA3P29320 MIR4648-201ENST00000580107 72 ntBASIC1.85□□□□□ -2.11
EPHA3P29320 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.85□□□□□ -2.11
EPHA3P29320 AC095038.3-201ENST00000634439 195 ntBASIC1.85□□□□□ -2.11
EPHA3P29320 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
EPHA3P29320 Y_RNA.357-201ENST00000365487 109 ntBASIC1.84□□□□□ -2.11
EPHA3P29320 RNU6-643P-201ENST00000384018 107 ntBASIC1.84□□□□□ -2.11
EPHA3P29320 RNU6-1135P-201ENST00000411083 103 ntBASIC1.84□□□□□ -2.11
EPHA3P29320 PGBD4P5-201ENST00000445958 426 ntBASIC1.84□□□□□ -2.11
EPHA3P29320 RNU1-41P-201ENST00000516161 162 ntBASIC1.84□□□□□ -2.11
EPHA3P29320 RNU1-48P-201ENST00000516400 162 ntBASIC1.84□□□□□ -2.11
EPHA3P29320 MIR4778-201ENST00000577635 80 ntBASIC1.84□□□□□ -2.11
EPHA3P29320 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.84□□□□□ -2.11
EPHA3P29320 MIR4713-201ENST00000582691 75 ntBASIC1.84□□□□□ -2.11
EPHA3P29320 SNORD3E-202ENST00000627253 216 ntBASIC1.84□□□□□ -2.11
EPHA3P29320 Y_RNA.8-201ENST00000362353 102 ntBASIC1.83□□□□□ -2.12
EPHA3P29320 RNU6-414P-201ENST00000363705 104 ntBASIC1.83□□□□□ -2.12
EPHA3P29320 Y_RNA.634-201ENST00000364811 113 ntBASIC1.83□□□□□ -2.12
EPHA3P29320 Y_RNA.441-201ENST00000384123 112 ntBASIC1.83□□□□□ -2.12
EPHA3P29320 RNU6-804P-201ENST00000384286 107 ntBASIC1.83□□□□□ -2.12
EPHA3P29320 SNORA79-201ENST00000408376 140 ntBASIC1.83□□□□□ -2.12
EPHA3P29320 RNU4-43P-201ENST00000410628 137 ntBASIC1.83□□□□□ -2.12
EPHA3P29320 RPL30P13-201ENST00000418873 348 ntBASIC1.83□□□□□ -2.12
EPHA3P29320 AL445646.1-201ENST00000431784 216 ntBASIC1.83□□□□□ -2.12
EPHA3P29320 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.83□□□□□ -2.12
EPHA3P29320 RNU6-197P-201ENST00000516680 100 ntBASIC1.83□□□□□ -2.12
EPHA3P29320 MIR4662B-201ENST00000579498 81 ntBASIC1.83□□□□□ -2.12
EPHA3P29320 AL513423.1-201ENST00000621695 132 ntBASIC1.83□□□□□ -2.12
EPHA3P29320 AL359851.1-201ENST00000569460 4997 ntBASIC1.83□□□□□ -2.12
EPHA3P29320 RNU4-84P-201ENST00000364200 139 ntBASIC1.82□□□□□ -2.12
EPHA3P29320 SNORA16.1-201ENST00000364597 132 ntBASIC1.82□□□□□ -2.12
EPHA3P29320 RNU6-442P-201ENST00000383968 104 ntBASIC1.82□□□□□ -2.12
EPHA3P29320 MIR660-201ENST00000385235 97 ntBASIC1.82□□□□□ -2.12
EPHA3P29320 MIR891A-201ENST00000401237 79 ntBASIC1.82□□□□□ -2.12
EPHA3P29320 MIR1261-201ENST00000408659 82 ntBASIC1.82□□□□□ -2.12
EPHA3P29320 Y_RNA.666-201ENST00000516187 112 ntBASIC1.82□□□□□ -2.12
EPHA3P29320 AC027279.3-201ENST00000625055 122 ntBASIC1.82□□□□□ -2.12
EPHA3P29320 MIR219B-201ENST00000637023 88 ntBASIC1.82□□□□□ -2.12
EPHA3P29320 MIR424-201ENST00000362227 98 ntBASIC1.81□□□□□ -2.12
EPHA3P29320 Y_RNA.272-201ENST00000364696 102 ntBASIC1.81□□□□□ -2.12
EPHA3P29320 AC107027.2-201ENST00000512197 115 ntBASIC1.81□□□□□ -2.12
EPHA3P29320 RNA5SP153-201ENST00000516498 76 ntBASIC1.81□□□□□ -2.12
EPHA3P29320 RNU6-365P-201ENST00000517113 106 ntBASIC1.81□□□□□ -2.12
EPHA3P29320 AC021753.1-201ENST00000635724 168 ntBASIC1.81□□□□□ -2.12
EPHA3P29320 AC092881.1-201ENST00000638218 2733 ntBASIC1.81□□□□□ -2.12
EPHA3P29320 RNU6-661P-201ENST00000362409 107 ntBASIC1.8□□□□□ -2.12
EPHA3P29320 RNU6-833P-201ENST00000363486 107 ntBASIC1.8□□□□□ -2.12
EPHA3P29320 RNU6-268P-201ENST00000364174 107 ntBASIC1.8□□□□□ -2.12
EPHA3P29320 Y_RNA.336-201ENST00000365307 109 ntBASIC1.8□□□□□ -2.12
EPHA3P29320 MIR194-1-201ENST00000384892 85 ntBASIC1.8□□□□□ -2.12
EPHA3P29320 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
EPHA3P29320 RNU6-239P-201ENST00000390990 99 ntBASIC1.8□□□□□ -2.12
EPHA3P29320 RNU6-394P-201ENST00000410735 107 ntBASIC1.8□□□□□ -2.12
EPHA3P29320 SNRPGP14-201ENST00000435400 219 ntBASIC1.8□□□□□ -2.12
EPHA3P29320 JTBP1-201ENST00000441314 247 ntBASIC1.8□□□□□ -2.12
EPHA3P29320 HMGN2P32-201ENST00000444648 269 ntBASIC1.8□□□□□ -2.12
EPHA3P29320 AC005840.1-201ENST00000498412 377 ntBASIC1.8□□□□□ -2.12
EPHA3P29320 SUMO2P16-201ENST00000519475 264 ntBASIC1.8□□□□□ -2.12
EPHA3P29320 AL096840.1-201ENST00000603287 93 ntBASIC1.8□□□□□ -2.12
EPHA3P29320 AL627230.6-201ENST00000611129 280 ntBASIC1.8□□□□□ -2.12
EPHA3P29320 RNU6-1130P-201ENST00000365434 107 ntBASIC1.79□□□□□ -2.12
EPHA3P29320 Y_RNA.398-201ENST00000383952 99 ntBASIC1.79□□□□□ -2.12
EPHA3P29320 Y_RNA.464-201ENST00000384282 110 ntBASIC1.79□□□□□ -2.12
EPHA3P29320 SNORA26-201ENST00000391286 122 ntBASIC1.79□□□□□ -2.12
EPHA3P29320 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.79□□□□□ -2.12
EPHA3P29320 MIR1267-201ENST00000408723 78 ntBASIC1.79□□□□□ -2.12
EPHA3P29320 AC004965.1-201ENST00000413033 213 ntBASIC1.79□□□□□ -2.12
EPHA3P29320 RPL23AP42-201ENST00000471152 471 ntBASIC1.79□□□□□ -2.12
EPHA3P29320 UBL5P3-201ENST00000475112 231 ntBASIC1.79□□□□□ -2.12
EPHA3P29320 RNU6-255P-201ENST00000516957 105 ntBASIC1.79□□□□□ -2.12
EPHA3P29320 RNU6-1270P-201ENST00000517128 108 ntBASIC1.79□□□□□ -2.12
EPHA3P29320 AL160236.1-201ENST00000556317 195 ntBASIC1.79□□□□□ -2.12
EPHA3P29320 MIR4419B-201ENST00000577260 68 ntBASIC1.79□□□□□ -2.12
EPHA3P29320 MIR3144-201ENST00000579460 79 ntBASIC1.79□□□□□ -2.12
EPHA3P29320 MIR378D2-201ENST00000580636 98 ntBASIC1.79□□□□□ -2.12
EPHA3P29320 AC103810.8-201ENST00000607347 118 ntBASIC1.79□□□□□ -2.12
EPHA3P29320 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
EPHA3P29320 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms