Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
COL8A1P27658 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
COL8A1P27658 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL8A1P27658 PWAR6-201ENST00000552334 4618 ntBASIC2.98□□□□□ -1.93
COL8A1P27658 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.98□□□□□ -1.93
COL8A1P27658 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL8A1P27658 SNORA25.6-201ENST00000364121 118 ntBASIC2.98□□□□□ -1.93
COL8A1P27658 SNORA32-201ENST00000384072 121 ntBASIC2.98□□□□□ -1.93
COL8A1P27658 RNU6-424P-201ENST00000384367 105 ntBASIC2.98□□□□□ -1.93
COL8A1P27658 RNU6-411P-201ENST00000384451 107 ntBASIC2.98□□□□□ -1.93
COL8A1P27658 MIR767-201ENST00000390228 109 ntBASIC2.98□□□□□ -1.93
COL8A1P27658 HSPE1P26-201ENST00000405341 275 ntBASIC2.98□□□□□ -1.93
COL8A1P27658 RNA5SP38-201ENST00000410750 119 ntBASIC2.98□□□□□ -1.93
COL8A1P27658 RNU6-991P-201ENST00000516168 107 ntBASIC2.98□□□□□ -1.93
COL8A1P27658 SNORA25.13-201ENST00000516395 103 ntBASIC2.98□□□□□ -1.93
COL8A1P27658 RNU7-28P-201ENST00000516759 62 ntBASIC2.98□□□□□ -1.93
COL8A1P27658 AL513043.2-201ENST00000573941 143 ntBASIC2.98□□□□□ -1.93
COL8A1P27658 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
COL8A1P27658 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COL8A1P27658 ICE2P2-201ENST00000483823 2787 ntBASIC2.98□□□□□ -1.93
COL8A1P27658 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COL8A1P27658 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.98□□□□□ -1.93
COL8A1P27658 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL8A1P27658 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.97□□□□□ -1.93
COL8A1P27658 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.97□□□□□ -1.93
COL8A1P27658 RNU4-32P-201ENST00000363404 141 ntBASIC2.97□□□□□ -1.93
COL8A1P27658 RNU6-624P-201ENST00000363411 107 ntBASIC2.97□□□□□ -1.93
COL8A1P27658 RNU1-105P-201ENST00000363470 161 ntBASIC2.97□□□□□ -1.93
COL8A1P27658 MIR548G-201ENST00000408442 89 ntBASIC2.97□□□□□ -1.93
COL8A1P27658 MIR1267-201ENST00000408723 78 ntBASIC2.97□□□□□ -1.93
COL8A1P27658 RNU2-63P-201ENST00000410792 194 ntBASIC2.97□□□□□ -1.93
COL8A1P27658 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.97□□□□□ -1.93
COL8A1P27658 RNU1-98P-201ENST00000458992 160 ntBASIC2.97□□□□□ -1.93
COL8A1P27658 TRBV12-2-201ENST00000489763 344 ntBASIC2.97□□□□□ -1.93
COL8A1P27658 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.97□□□□□ -1.93
COL8A1P27658 RNU6-90P-201ENST00000606352 106 ntBASIC2.97□□□□□ -1.93
COL8A1P27658 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.97□□□□□ -1.93
COL8A1P27658 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
COL8A1P27658 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
COL8A1P27658 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.96□□□□□ -1.93
COL8A1P27658 AC096644.4-201ENST00000563417 2912 ntBASIC2.96□□□□□ -1.93
COL8A1P27658 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL8A1P27658 RNA5SP252-201ENST00000391131 119 ntBASIC2.96□□□□□ -1.94
COL8A1P27658 MIR1236-201ENST00000408340 102 ntBASIC2.96□□□□□ -1.94
COL8A1P27658 RNU4-37P-201ENST00000410214 84 ntBASIC2.96□□□□□ -1.94
COL8A1P27658 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.96□□□□□ -1.94
COL8A1P27658 TRIAP1P1-201ENST00000427062 225 ntBASIC2.96□□□□□ -1.94
COL8A1P27658 AL161788.1-201ENST00000441805 169 ntBASIC2.96□□□□□ -1.94
COL8A1P27658 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.96□□□□□ -1.94
COL8A1P27658 RNA5SP356-201ENST00000515972 94 ntBASIC2.96□□□□□ -1.94
COL8A1P27658 MIR3134-201ENST00000579433 74 ntBASIC2.96□□□□□ -1.94
COL8A1P27658 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.96□□□□□ -1.94
COL8A1P27658 AP003355.3-201ENST00000623465 114 ntBASIC2.96□□□□□ -1.94
COL8A1P27658 SNORD3E-202ENST00000627253 216 ntBASIC2.96□□□□□ -1.94
COL8A1P27658 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
COL8A1P27658 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
COL8A1P27658 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
COL8A1P27658 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL8A1P27658 MIR34C-201ENST00000384831 77 ntBASIC2.95□□□□□ -1.94
COL8A1P27658 MIR206-201ENST00000384872 86 ntBASIC2.95□□□□□ -1.94
COL8A1P27658 SNORA26.6-201ENST00000391256 115 ntBASIC2.95□□□□□ -1.94
COL8A1P27658 RNU6-380P-201ENST00000410207 107 ntBASIC2.95□□□□□ -1.94
COL8A1P27658 AL450471.1-201ENST00000447509 127 ntBASIC2.95□□□□□ -1.94
COL8A1P27658 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.95□□□□□ -1.94
COL8A1P27658 AL163195.1-201ENST00000496941 348 ntBASIC2.95□□□□□ -1.94
COL8A1P27658 SNORA31.1-201ENST00000515993 133 ntBASIC2.95□□□□□ -1.94
COL8A1P27658 SNORA31.5-201ENST00000516190 133 ntBASIC2.95□□□□□ -1.94
COL8A1P27658 RNU6-917P-201ENST00000516294 104 ntBASIC2.95□□□□□ -1.94
COL8A1P27658 RNU7-153P-201ENST00000516455 62 ntBASIC2.95□□□□□ -1.94
COL8A1P27658 RNU6-557P-201ENST00000516842 110 ntBASIC2.95□□□□□ -1.94
COL8A1P27658 DNAJC19P9-201ENST00000555084 351 ntBASIC2.95□□□□□ -1.94
COL8A1P27658 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.95□□□□□ -1.94
COL8A1P27658 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
COL8A1P27658 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
COL8A1P27658 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL8A1P27658 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL8A1P27658 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL8A1P27658 MFSD8-233ENST00000641482 4860 ntBASIC2.94□□□□□ -1.94
COL8A1P27658 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
COL8A1P27658 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
COL8A1P27658 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
COL8A1P27658 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL8A1P27658 AC093831.2-201ENST00000624393 3427 ntBASIC2.94□□□□□ -1.94
COL8A1P27658 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.94□□□□□ -1.94
COL8A1P27658 RNU4-82P-201ENST00000362443 140 ntBASIC2.94□□□□□ -1.94
COL8A1P27658 SNORA70.7-201ENST00000384159 133 ntBASIC2.94□□□□□ -1.94
COL8A1P27658 RN7SKP111-201ENST00000410349 271 ntBASIC2.94□□□□□ -1.94
COL8A1P27658 RNU4-47P-201ENST00000410876 114 ntBASIC2.94□□□□□ -1.94
COL8A1P27658 RN7SKP192-201ENST00000411291 327 ntBASIC2.94□□□□□ -1.94
COL8A1P27658 TRBV12-1-201ENST00000479785 344 ntBASIC2.94□□□□□ -1.94
COL8A1P27658 RNU7-53P-201ENST00000516705 60 ntBASIC2.94□□□□□ -1.94
COL8A1P27658 AC007536.1-201ENST00000533382 349 ntBASIC2.94□□□□□ -1.94
COL8A1P27658 GTF3AP2-201ENST00000557014 266 ntBASIC2.94□□□□□ -1.94
COL8A1P27658 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.94□□□□□ -1.94
COL8A1P27658 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.94□□□□□ -1.94
COL8A1P27658 RNVU1-4-201ENST00000612985 164 ntBASIC2.94□□□□□ -1.94
COL8A1P27658 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
COL8A1P27658 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL8A1P27658 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.94□□□□□ -1.94
COL8A1P27658 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 146.4 ms