Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RNA5SP24-201ENST00000516478 95 ntBASIC2.11□□□□□ -2.07
CD40P25942 SNORD53-201ENST00000579969 78 ntBASIC2.11□□□□□ -2.07
CD40P25942 MIR3910-1-201ENST00000580936 111 ntBASIC2.11□□□□□ -2.07
CD40P25942 MIR424-201ENST00000362227 98 ntBASIC2.1□□□□□ -2.07
CD40P25942 RNA5SP289-201ENST00000362332 137 ntBASIC2.1□□□□□ -2.07
CD40P25942 SNORD50.2-201ENST00000365465 70 ntBASIC2.1□□□□□ -2.07
CD40P25942 Y_RNA.547-201ENST00000384654 119 ntBASIC2.1□□□□□ -2.07
CD40P25942 RPL23AP6-201ENST00000446637 472 ntBASIC2.1□□□□□ -2.07
CD40P25942 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.1□□□□□ -2.07
CD40P25942 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.1□□□□□ -2.07
CD40P25942 SNORA31.15-201ENST00000516771 132 ntBASIC2.1□□□□□ -2.07
CD40P25942 AL365205.2-201ENST00000594586 68 ntBASIC2.1□□□□□ -2.07
CD40P25942 AP001485.1-201ENST00000604799 199 ntBASIC2.1□□□□□ -2.07
CD40P25942 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
CD40P25942 RNU6-414P-201ENST00000363705 104 ntBASIC2.09□□□□□ -2.07
CD40P25942 MIR17-201ENST00000385012 84 ntBASIC2.09□□□□□ -2.07
CD40P25942 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CD40P25942 RNU6-460P-201ENST00000391158 108 ntBASIC2.09□□□□□ -2.07
CD40P25942 RNU4-53P-201ENST00000410828 140 ntBASIC2.09□□□□□ -2.07
CD40P25942 RNA5SP127-201ENST00000411051 133 ntBASIC2.09□□□□□ -2.07
CD40P25942 RN7SKP192-201ENST00000411291 327 ntBASIC2.09□□□□□ -2.07
CD40P25942 AC015922.2-201ENST00000435593 184 ntBASIC2.09□□□□□ -2.07
CD40P25942 TMSB4XP3-201ENST00000445144 114 ntBASIC2.09□□□□□ -2.07
CD40P25942 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.09□□□□□ -2.07
CD40P25942 AC022254.1-201ENST00000567857 235 ntBASIC2.09□□□□□ -2.07
CD40P25942 MIR4299-201ENST00000577899 72 ntBASIC2.09□□□□□ -2.07
CD40P25942 MIR3670-2-201ENST00000582974 65 ntBASIC2.09□□□□□ -2.07
CD40P25942 MIR3670-1-201ENST00000584160 65 ntBASIC2.09□□□□□ -2.07
CD40P25942 MIR3670-3-201ENST00000584855 65 ntBASIC2.09□□□□□ -2.07
CD40P25942 MIR3670-4-201ENST00000612260 65 ntBASIC2.09□□□□□ -2.07
CD40P25942 AC064859.1-201ENST00000624741 174 ntBASIC2.09□□□□□ -2.07
CD40P25942 MIR1291-201ENST00000627649 87 ntBASIC2.09□□□□□ -2.07
CD40P25942 MIR203B-201ENST00000636080 86 ntBASIC2.09□□□□□ -2.07
CD40P25942 Y_RNA.420-201ENST00000384043 110 ntBASIC2.08□□□□□ -2.08
CD40P25942 Y_RNA.542-201ENST00000384641 111 ntBASIC2.08□□□□□ -2.08
CD40P25942 MIR516B2-201ENST00000385190 85 ntBASIC2.08□□□□□ -2.08
CD40P25942 AF228730.3-201ENST00000436691 102 ntBASIC2.08□□□□□ -2.08
CD40P25942 AC103810.6-201ENST00000606708 136 ntBASIC2.08□□□□□ -2.08
CD40P25942 MIR6895-201ENST00000613497 78 ntBASIC2.08□□□□□ -2.08
CD40P25942 AC091895.1-201ENST00000624494 256 ntBASIC2.08□□□□□ -2.08
CD40P25942 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
CD40P25942 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.08□□□□□ -2.08
CD40P25942 AC010332.2-201ENST00000613083 1904 ntBASIC2.07□□□□□ -2.08
CD40P25942 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
CD40P25942 SNORD115-28-201ENST00000363931 81 ntBASIC2.07□□□□□ -2.08
CD40P25942 SNORA25.6-201ENST00000364121 118 ntBASIC2.07□□□□□ -2.08
CD40P25942 Y_RNA.251-201ENST00000364551 99 ntBASIC2.07□□□□□ -2.08
CD40P25942 MIR452-201ENST00000385020 85 ntBASIC2.07□□□□□ -2.08
CD40P25942 Y_RNA.584-201ENST00000391090 114 ntBASIC2.07□□□□□ -2.08
CD40P25942 SNORD77.3-201ENST00000391113 65 ntBASIC2.07□□□□□ -2.08
CD40P25942 AL445646.1-201ENST00000431784 216 ntBASIC2.07□□□□□ -2.08
CD40P25942 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.07□□□□□ -2.08
CD40P25942 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.07□□□□□ -2.08
CD40P25942 AC026436.1-201ENST00000510537 270 ntBASIC2.07□□□□□ -2.08
CD40P25942 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.07□□□□□ -2.08
CD40P25942 RNU6-789P-201ENST00000517105 102 ntBASIC2.07□□□□□ -2.08
CD40P25942 MIR3945-201ENST00000581853 98 ntBASIC2.07□□□□□ -2.08
CD40P25942 MIR4713-201ENST00000582691 75 ntBASIC2.07□□□□□ -2.08
CD40P25942 AC046143.2-201ENST00000609789 160 ntBASIC2.07□□□□□ -2.08
CD40P25942 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.07□□□□□ -2.08
CD40P25942 AC010297.1-201ENST00000623948 149 ntBASIC2.07□□□□□ -2.08
CD40P25942 AC095038.3-201ENST00000634439 195 ntBASIC2.07□□□□□ -2.08
CD40P25942 AC016717.2-201ENST00000609089 5141 ntBASIC2.07□□□□□ -2.08
CD40P25942 AL596028.1-201ENST00000326971 197 ntBASIC2.06□□□□□ -2.08
CD40P25942 RNU6-1123P-201ENST00000362347 106 ntBASIC2.06□□□□□ -2.08
CD40P25942 MIR194-1-201ENST00000384892 85 ntBASIC2.06□□□□□ -2.08
CD40P25942 MIR624-201ENST00000385217 97 ntBASIC2.06□□□□□ -2.08
CD40P25942 RNU6-257P-201ENST00000410238 98 ntBASIC2.06□□□□□ -2.08
CD40P25942 SUMO2P16-201ENST00000519475 264 ntBASIC2.06□□□□□ -2.08
CD40P25942 AC131055.1-201ENST00000584626 316 ntBASIC2.06□□□□□ -2.08
CD40P25942 AL049779.4-201ENST00000604500 156 ntBASIC2.06□□□□□ -2.08
CD40P25942 AC134878.1-201ENST00000619901 243 ntBASIC2.06□□□□□ -2.08
CD40P25942 Y_RNA.37-201ENST00000362606 108 ntBASIC2.05□□□□□ -2.08
CD40P25942 SNORD114-30-201ENST00000364448 72 ntBASIC2.05□□□□□ -2.08
CD40P25942 RNU6-1292P-201ENST00000383856 107 ntBASIC2.05□□□□□ -2.08
CD40P25942 SNORA3.2-201ENST00000408221 125 ntBASIC2.05□□□□□ -2.08
CD40P25942 RPS12P2-201ENST00000439728 269 ntBASIC2.05□□□□□ -2.08
CD40P25942 JTBP1-201ENST00000441314 247 ntBASIC2.05□□□□□ -2.08
CD40P25942 RNU6-406P-201ENST00000516470 107 ntBASIC2.05□□□□□ -2.08
CD40P25942 AC106754.2-201ENST00000623006 233 ntBASIC2.05□□□□□ -2.08
CD40P25942 RNU6-661P-201ENST00000362409 107 ntBASIC2.04□□□□□ -2.08
CD40P25942 RNU6-457P-201ENST00000363999 107 ntBASIC2.04□□□□□ -2.08
CD40P25942 DEFA7P-201ENST00000382676 285 ntBASIC2.04□□□□□ -2.08
CD40P25942 SNORA70B-201ENST00000384210 135 ntBASIC2.04□□□□□ -2.08
CD40P25942 MIR526A1-201ENST00000384897 85 ntBASIC2.04□□□□□ -2.08
CD40P25942 AC004965.1-201ENST00000413033 213 ntBASIC2.04□□□□□ -2.08
CD40P25942 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.04□□□□□ -2.08
CD40P25942 RNA5SP281-201ENST00000516504 135 ntBASIC2.04□□□□□ -2.08
CD40P25942 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.04□□□□□ -2.08
CD40P25942 DEFB122-202ENST00000569013 197 ntBASIC2.04□□□□□ -2.08
CD40P25942 AC067747.1-201ENST00000608026 250 ntBASIC2.04□□□□□ -2.08
CD40P25942 AC132825.6-201ENST00000638861 357 ntBASIC2.04□□□□□ -2.08
CD40P25942 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CD40P25942 ZNF658B-202ENST00000615961 3375 ntBASIC2.04□□□□□ -2.08
CD40P25942 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CD40P25942 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CD40P25942 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CD40P25942 Y_RNA.52-201ENST00000362760 96 ntBASIC2.03□□□□□ -2.08
CD40P25942 U8.1-201ENST00000362843 134 ntBASIC2.03□□□□□ -2.08
CD40P25942 RNU6-915P-201ENST00000364943 103 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms