Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.21□□□□□ -2.06
XPAP23025 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
XPAP23025 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
XPAP23025 RNU6-1084P-201ENST00000362498 107 ntBASIC2.2□□□□□ -2.06
XPAP23025 Y_RNA.497-201ENST00000384447 98 ntBASIC2.2□□□□□ -2.06
XPAP23025 Y_RNA.568-201ENST00000384742 113 ntBASIC2.2□□□□□ -2.06
XPAP23025 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
XPAP23025 RNA5SP212-201ENST00000391223 107 ntBASIC2.2□□□□□ -2.06
XPAP23025 RNU2-7P-201ENST00000410794 178 ntBASIC2.2□□□□□ -2.06
XPAP23025 AC244636.1-201ENST00000421152 228 ntBASIC2.2□□□□□ -2.06
XPAP23025 CALM2P4-201ENST00000430810 426 ntBASIC2.2□□□□□ -2.06
XPAP23025 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.2□□□□□ -2.06
XPAP23025 RNA5SP200-201ENST00000516360 103 ntBASIC2.2□□□□□ -2.06
XPAP23025 SCARNA16.3-201ENST00000516595 184 ntBASIC2.2□□□□□ -2.06
XPAP23025 AC007751.1-201ENST00000529260 376 ntBASIC2.2□□□□□ -2.06
XPAP23025 AC112693.2-201ENST00000556538 232 ntBASIC2.2□□□□□ -2.06
XPAP23025 MIR4299-201ENST00000577899 72 ntBASIC2.2□□□□□ -2.06
XPAP23025 MIR4648-201ENST00000580107 72 ntBASIC2.2□□□□□ -2.06
XPAP23025 MIR3945-201ENST00000581853 98 ntBASIC2.2□□□□□ -2.06
XPAP23025 MIR4298-201ENST00000584380 73 ntBASIC2.2□□□□□ -2.06
XPAP23025 AL096840.1-201ENST00000603287 93 ntBASIC2.2□□□□□ -2.06
XPAP23025 AL773524.1-201ENST00000614065 229 ntBASIC2.2□□□□□ -2.06
XPAP23025 AC009831.4-201ENST00000620744 325 ntBASIC2.2□□□□□ -2.06
XPAP23025 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.2□□□□□ -2.06
XPAP23025 RNU6-597P-201ENST00000365620 102 ntBASIC2.19□□□□□ -2.06
XPAP23025 RNU7-197P-201ENST00000458836 62 ntBASIC2.19□□□□□ -2.06
XPAP23025 AC092991.1-201ENST00000477176 376 ntBASIC2.19□□□□□ -2.06
XPAP23025 SNORD45.4-201ENST00000516629 73 ntBASIC2.19□□□□□ -2.06
XPAP23025 RNU7-28P-201ENST00000516759 62 ntBASIC2.19□□□□□ -2.06
XPAP23025 RNU6-365P-201ENST00000517113 106 ntBASIC2.19□□□□□ -2.06
XPAP23025 MIR4662B-201ENST00000579498 81 ntBASIC2.19□□□□□ -2.06
XPAP23025 U2.22-201ENST00000636441 106 ntBASIC2.19□□□□□ -2.06
XPAP23025 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
XPAP23025 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
XPAP23025 RNU6-199P-201ENST00000362954 107 ntBASIC2.18□□□□□ -2.06
XPAP23025 SNORD50.2-201ENST00000365465 70 ntBASIC2.18□□□□□ -2.06
XPAP23025 SNORA1-201ENST00000384107 130 ntBASIC2.18□□□□□ -2.06
XPAP23025 SNORD61-201ENST00000384252 73 ntBASIC2.18□□□□□ -2.06
XPAP23025 SNORA19-201ENST00000384737 128 ntBASIC2.18□□□□□ -2.06
XPAP23025 U8.16-201ENST00000391279 133 ntBASIC2.18□□□□□ -2.06
XPAP23025 RN7SKP200-201ENST00000410564 320 ntBASIC2.18□□□□□ -2.06
XPAP23025 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.18□□□□□ -2.06
XPAP23025 AC114811.1-201ENST00000507207 168 ntBASIC2.18□□□□□ -2.06
XPAP23025 SNORA31.17-201ENST00000516953 127 ntBASIC2.18□□□□□ -2.06
XPAP23025 RNU6-1270P-201ENST00000517128 108 ntBASIC2.18□□□□□ -2.06
XPAP23025 MIR3646-201ENST00000578301 84 ntBASIC2.18□□□□□ -2.06
XPAP23025 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
XPAP23025 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.18□□□□□ -2.06
XPAP23025 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
XPAP23025 AL359851.1-201ENST00000569460 4997 ntBASIC2.17□□□□□ -2.06
XPAP23025 Y_RNA.343-201ENST00000365354 112 ntBASIC2.17□□□□□ -2.06
XPAP23025 RNU6-1031P-201ENST00000384773 107 ntBASIC2.17□□□□□ -2.06
XPAP23025 MIR548A2-201ENST00000384956 97 ntBASIC2.17□□□□□ -2.06
XPAP23025 SNORA48.3-201ENST00000391081 134 ntBASIC2.17□□□□□ -2.06
XPAP23025 RNU6-460P-201ENST00000391158 108 ntBASIC2.17□□□□□ -2.06
XPAP23025 SNRPGP14-201ENST00000435400 219 ntBASIC2.17□□□□□ -2.06
XPAP23025 Y_RNA.714-201ENST00000517065 90 ntBASIC2.17□□□□□ -2.06
XPAP23025 RNU6-789P-201ENST00000517105 102 ntBASIC2.17□□□□□ -2.06
XPAP23025 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.17□□□□□ -2.06
XPAP23025 Y_RNA.251-201ENST00000364551 99 ntBASIC2.16□□□□□ -2.06
XPAP23025 snoU2-30.1-201ENST00000365012 70 ntBASIC2.16□□□□□ -2.06
XPAP23025 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
XPAP23025 SNORA26-201ENST00000391286 122 ntBASIC2.16□□□□□ -2.06
XPAP23025 SNORA75.5-201ENST00000391291 81 ntBASIC2.16□□□□□ -2.06
XPAP23025 MIR513C-201ENST00000401352 84 ntBASIC2.16□□□□□ -2.06
XPAP23025 RNU6-257P-201ENST00000410238 98 ntBASIC2.16□□□□□ -2.06
XPAP23025 HMGN2P19-201ENST00000425149 265 ntBASIC2.16□□□□□ -2.06
XPAP23025 TMSB4XP3-201ENST00000445144 114 ntBASIC2.16□□□□□ -2.06
XPAP23025 RNU7-34P-201ENST00000459394 64 ntBASIC2.16□□□□□ -2.06
XPAP23025 RNA5SP168-201ENST00000516642 112 ntBASIC2.16□□□□□ -2.06
XPAP23025 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.16□□□□□ -2.06
XPAP23025 AC087685.1-201ENST00000587507 141 ntBASIC2.16□□□□□ -2.06
XPAP23025 SNORA28-201ENST00000606769 126 ntBASIC2.16□□□□□ -2.06
XPAP23025 AC021506.2-201ENST00000612354 169 ntBASIC2.16□□□□□ -2.06
XPAP23025 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
XPAP23025 SNORD14E-201ENST00000364009 85 ntBASIC2.15□□□□□ -2.07
XPAP23025 RNU6-268P-201ENST00000364174 107 ntBASIC2.15□□□□□ -2.07
XPAP23025 RNU6-424P-201ENST00000384367 105 ntBASIC2.15□□□□□ -2.07
XPAP23025 RNU6-163P-201ENST00000384396 106 ntBASIC2.15□□□□□ -2.07
XPAP23025 AL034345.1-201ENST00000407768 123 ntBASIC2.15□□□□□ -2.07
XPAP23025 RPL30P13-201ENST00000418873 348 ntBASIC2.15□□□□□ -2.07
XPAP23025 RNA5SP57-201ENST00000459463 123 ntBASIC2.15□□□□□ -2.07
XPAP23025 AC099513.1-201ENST00000490423 301 ntBASIC2.15□□□□□ -2.07
XPAP23025 RNU6-693P-201ENST00000516134 107 ntBASIC2.15□□□□□ -2.07
XPAP23025 RNU6-504P-201ENST00000516568 104 ntBASIC2.15□□□□□ -2.07
XPAP23025 AP001485.1-201ENST00000604799 199 ntBASIC2.15□□□□□ -2.07
XPAP23025 MIR219B-201ENST00000637023 88 ntBASIC2.15□□□□□ -2.07
XPAP23025 AC132825.6-201ENST00000638861 357 ntBASIC2.15□□□□□ -2.07
XPAP23025 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
XPAP23025 SNORA25.7-201ENST00000364375 127 ntBASIC2.14□□□□□ -2.07
XPAP23025 RNU6-442P-201ENST00000383968 104 ntBASIC2.14□□□□□ -2.07
XPAP23025 Y_RNA.420-201ENST00000384043 110 ntBASIC2.14□□□□□ -2.07
XPAP23025 SNORA64-201ENST00000384674 134 ntBASIC2.14□□□□□ -2.07
XPAP23025 MIR802-201ENST00000390235 94 ntBASIC2.14□□□□□ -2.07
XPAP23025 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
XPAP23025 MIR676-201ENST00000390702 67 ntBASIC2.14□□□□□ -2.07
XPAP23025 Y_RNA.586-201ENST00000391146 98 ntBASIC2.14□□□□□ -2.07
XPAP23025 MIR1261-201ENST00000408659 82 ntBASIC2.14□□□□□ -2.07
XPAP23025 snoU13.27-201ENST00000459278 104 ntBASIC2.14□□□□□ -2.07
XPAP23025 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms