Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
PCNAP12004 AP000648.3-201ENST00000623539 4507 ntBASIC1.53□□□□□ -2.16
PCNAP12004 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
PCNAP12004 RNU6-199P-201ENST00000362954 107 ntBASIC1.52□□□□□ -2.17
PCNAP12004 RNU6-833P-201ENST00000363486 107 ntBASIC1.52□□□□□ -2.17
PCNAP12004 RNU6-379P-201ENST00000363813 104 ntBASIC1.52□□□□□ -2.17
PCNAP12004 RNU6-923P-201ENST00000364753 107 ntBASIC1.52□□□□□ -2.17
PCNAP12004 Y_RNA.308-201ENST00000365043 101 ntBASIC1.52□□□□□ -2.17
PCNAP12004 RNY4P28-201ENST00000365281 93 ntBASIC1.52□□□□□ -2.17
PCNAP12004 Y_RNA.587-201ENST00000391210 103 ntBASIC1.52□□□□□ -2.17
PCNAP12004 RNU6-493P-201ENST00000391321 108 ntBASIC1.52□□□□□ -2.17
PCNAP12004 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.52□□□□□ -2.17
PCNAP12004 AC023790.1-201ENST00000482174 347 ntBASIC1.52□□□□□ -2.17
PCNAP12004 AC079140.2-201ENST00000506193 142 ntBASIC1.52□□□□□ -2.17
PCNAP12004 RNU6-922P-201ENST00000516753 99 ntBASIC1.52□□□□□ -2.17
PCNAP12004 AC008507.4-201ENST00000585464 127 ntBASIC1.52□□□□□ -2.17
PCNAP12004 AC078938.1-201ENST00000620993 318 ntBASIC1.52□□□□□ -2.17
PCNAP12004 AC027279.3-201ENST00000625055 122 ntBASIC1.52□□□□□ -2.17
PCNAP12004 MIR1298-201ENST00000408783 112 ntBASIC1.51□□□□□ -2.17
PCNAP12004 Y_RNA.618-201ENST00000410949 107 ntBASIC1.51□□□□□ -2.17
PCNAP12004 Y_RNA.626-201ENST00000411288 95 ntBASIC1.51□□□□□ -2.17
PCNAP12004 RNU6-388P-201ENST00000517012 105 ntBASIC1.51□□□□□ -2.17
PCNAP12004 RNU6-389P-201ENST00000517048 105 ntBASIC1.51□□□□□ -2.17
PCNAP12004 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.51□□□□□ -2.17
PCNAP12004 MIR3937-201ENST00000580135 106 ntBASIC1.51□□□□□ -2.17
PCNAP12004 BX248123.2-201ENST00000606318 124 ntBASIC1.51□□□□□ -2.17
PCNAP12004 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
PCNAP12004 SNORD14E-201ENST00000364009 85 ntBASIC1.5□□□□□ -2.17
PCNAP12004 Y_RNA.262-201ENST00000364641 102 ntBASIC1.5□□□□□ -2.17
PCNAP12004 RNA5SP190-201ENST00000365222 118 ntBASIC1.5□□□□□ -2.17
PCNAP12004 Y_RNA.489-201ENST00000384410 101 ntBASIC1.5□□□□□ -2.17
PCNAP12004 RPS27P16-201ENST00000425758 201 ntBASIC1.5□□□□□ -2.17
PCNAP12004 RNU4-71P-201ENST00000516258 113 ntBASIC1.5□□□□□ -2.17
PCNAP12004 RNU7-149P-201ENST00000516739 59 ntBASIC1.5□□□□□ -2.17
PCNAP12004 Y_RNA.714-201ENST00000517065 90 ntBASIC1.5□□□□□ -2.17
PCNAP12004 AP000942.4-201ENST00000604811 241 ntBASIC1.5□□□□□ -2.17
PCNAP12004 uc_338.4-201ENST00000616635 176 ntBASIC1.5□□□□□ -2.17
PCNAP12004 MIR802-201ENST00000390235 94 ntBASIC1.49□□□□□ -2.17
PCNAP12004 RNA5SP496-201ENST00000391240 109 ntBASIC1.49□□□□□ -2.17
PCNAP12004 RNU6-381P-201ENST00000391259 108 ntBASIC1.49□□□□□ -2.17
PCNAP12004 RNU6-955P-201ENST00000410497 104 ntBASIC1.49□□□□□ -2.17
PCNAP12004 AC027119.1-201ENST00000440877 241 ntBASIC1.49□□□□□ -2.17
PCNAP12004 RNU6-1007P-201ENST00000516586 107 ntBASIC1.49□□□□□ -2.17
PCNAP12004 RNU6-548P-201ENST00000517083 115 ntBASIC1.49□□□□□ -2.17
PCNAP12004 AC090142.3-201ENST00000519012 385 ntBASIC1.49□□□□□ -2.17
PCNAP12004 FAM106DP-201ENST00000586416 501 ntBASIC1.49□□□□□ -2.17
PCNAP12004 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
PCNAP12004 RNU4-17P-201ENST00000365598 141 ntBASIC1.48□□□□□ -2.17
PCNAP12004 MIR1304-201ENST00000408243 91 ntBASIC1.48□□□□□ -2.17
PCNAP12004 SNRPGP14-201ENST00000435400 219 ntBASIC1.48□□□□□ -2.17
PCNAP12004 SNORD13-201ENST00000459299 104 ntBASIC1.48□□□□□ -2.17
PCNAP12004 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.48□□□□□ -2.17
PCNAP12004 SNORD53B-201ENST00000577887 78 ntBASIC1.48□□□□□ -2.17
PCNAP12004 MIR3683-201ENST00000580847 82 ntBASIC1.48□□□□□ -2.17
PCNAP12004 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
PCNAP12004 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
PCNAP12004 Y_RNA.199-201ENST00000364014 102 ntBASIC1.47□□□□□ -2.17
PCNAP12004 RNU1-78P-201ENST00000391248 165 ntBASIC1.47□□□□□ -2.17
PCNAP12004 MIR1323-201ENST00000408090 73 ntBASIC1.47□□□□□ -2.17
PCNAP12004 Y_RNA.622-201ENST00000411091 108 ntBASIC1.47□□□□□ -2.17
PCNAP12004 AC015922.2-201ENST00000435593 184 ntBASIC1.47□□□□□ -2.17
PCNAP12004 HMGN2P32-201ENST00000444648 269 ntBASIC1.47□□□□□ -2.17
PCNAP12004 AC023449.1-201ENST00000454464 154 ntBASIC1.47□□□□□ -2.17
PCNAP12004 RNU6-561P-201ENST00000516222 102 ntBASIC1.47□□□□□ -2.17
PCNAP12004 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.47□□□□□ -2.17
PCNAP12004 AC130289.1-201ENST00000577321 73 ntBASIC1.47□□□□□ -2.17
PCNAP12004 MIR4308-201ENST00000580634 81 ntBASIC1.47□□□□□ -2.17
PCNAP12004 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
PCNAP12004 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
PCNAP12004 RNU6-268P-201ENST00000364174 107 ntBASIC1.46□□□□□ -2.18
PCNAP12004 RNY1-201ENST00000364228 113 ntBASIC1.46□□□□□ -2.18
PCNAP12004 RNU6-442P-201ENST00000383968 104 ntBASIC1.46□□□□□ -2.18
PCNAP12004 Y_RNA.476-201ENST00000384347 108 ntBASIC1.46□□□□□ -2.18
PCNAP12004 MIR150-201ENST00000385048 84 ntBASIC1.46□□□□□ -2.18
PCNAP12004 MIR320A-201ENST00000385302 82 ntBASIC1.46□□□□□ -2.18
PCNAP12004 SNORD41-201ENST00000386967 70 ntBASIC1.46□□□□□ -2.18
PCNAP12004 MT-TG-201ENST00000387429 68 ntBASIC1.46□□□□□ -2.18
PCNAP12004 AL606845.1-201ENST00000404881 255 ntBASIC1.46□□□□□ -2.18
PCNAP12004 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.46□□□□□ -2.18
PCNAP12004 RNA5SP445-201ENST00000515889 115 ntBASIC1.46□□□□□ -2.18
PCNAP12004 SNORD77.4-201ENST00000516158 81 ntBASIC1.46□□□□□ -2.18
PCNAP12004 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
PCNAP12004 AC087685.1-201ENST00000587507 141 ntBASIC1.46□□□□□ -2.18
PCNAP12004 AC009779.6-201ENST00000603972 165 ntBASIC1.46□□□□□ -2.18
PCNAP12004 RNU2-4P-201ENST00000606190 192 ntBASIC1.46□□□□□ -2.18
PCNAP12004 Pinc.1-201ENST00000616452 154 ntBASIC1.46□□□□□ -2.18
PCNAP12004 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.46□□□□□ -2.18
PCNAP12004 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.46□□□□□ -2.18
PCNAP12004 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
PCNAP12004 Y_RNA.200-201ENST00000364018 102 ntBASIC1.45□□□□□ -2.18
PCNAP12004 Y_RNA.274-201ENST00000364714 101 ntBASIC1.45□□□□□ -2.18
PCNAP12004 Y_RNA.336-201ENST00000365307 109 ntBASIC1.45□□□□□ -2.18
PCNAP12004 Y_RNA.486-201ENST00000384398 107 ntBASIC1.45□□□□□ -2.18
PCNAP12004 MIR452-201ENST00000385020 85 ntBASIC1.45□□□□□ -2.18
PCNAP12004 MIR653-201ENST00000385279 96 ntBASIC1.45□□□□□ -2.18
PCNAP12004 SNORA67.6-201ENST00000391093 99 ntBASIC1.45□□□□□ -2.18
PCNAP12004 SNX2P2-201ENST00000424553 323 ntBASIC1.45□□□□□ -2.18
PCNAP12004 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.45□□□□□ -2.18
PCNAP12004 AC090049.2-201ENST00000550377 109 ntBASIC1.45□□□□□ -2.18
PCNAP12004 AL160236.1-201ENST00000556317 195 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms