Protein–RNA interactions for Protein: P0DP06

IGHV4-30-4, Immunoglobulin heavy variable 4-30-4, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-30-4P0DP06 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
IGHV4-30-4P0DP06 AC005336.3-201ENST00000623833 2679 ntBASIC1.54□□□□□ -2.16
IGHV4-30-4P0DP06 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
IGHV4-30-4P0DP06 Y_RNA.23-201ENST00000362496 106 ntBASIC1.54□□□□□ -2.16
IGHV4-30-4P0DP06 Y_RNA.91-201ENST00000363042 107 ntBASIC1.54□□□□□ -2.16
IGHV4-30-4P0DP06 RNU6-312P-201ENST00000364629 107 ntBASIC1.54□□□□□ -2.16
IGHV4-30-4P0DP06 Y_RNA.486-201ENST00000384398 107 ntBASIC1.54□□□□□ -2.16
IGHV4-30-4P0DP06 MIR660-201ENST00000385235 97 ntBASIC1.54□□□□□ -2.16
IGHV4-30-4P0DP06 MIR548I3-201ENST00000408378 149 ntBASIC1.54□□□□□ -2.16
IGHV4-30-4P0DP06 MIR548I1-201ENST00000408810 149 ntBASIC1.54□□□□□ -2.16
IGHV4-30-4P0DP06 RNU2-70P-201ENST00000410718 179 ntBASIC1.54□□□□□ -2.16
IGHV4-30-4P0DP06 RNU2-55P-201ENST00000411146 174 ntBASIC1.54□□□□□ -2.16
IGHV4-30-4P0DP06 RPL30P13-201ENST00000418873 348 ntBASIC1.54□□□□□ -2.16
IGHV4-30-4P0DP06 RPS27P21-201ENST00000486977 252 ntBASIC1.54□□□□□ -2.16
IGHV4-30-4P0DP06 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.54□□□□□ -2.16
IGHV4-30-4P0DP06 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
IGHV4-30-4P0DP06 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
IGHV4-30-4P0DP06 MIR424-201ENST00000362227 98 ntBASIC1.53□□□□□ -2.16
IGHV4-30-4P0DP06 RNU6-661P-201ENST00000362409 107 ntBASIC1.53□□□□□ -2.16
IGHV4-30-4P0DP06 RNA5SP99-201ENST00000364020 114 ntBASIC1.53□□□□□ -2.16
IGHV4-30-4P0DP06 RNU6-442P-201ENST00000383968 104 ntBASIC1.53□□□□□ -2.16
IGHV4-30-4P0DP06 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
IGHV4-30-4P0DP06 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.53□□□□□ -2.16
IGHV4-30-4P0DP06 MIR891A-201ENST00000401237 79 ntBASIC1.53□□□□□ -2.16
IGHV4-30-4P0DP06 AC019129.1-201ENST00000403786 261 ntBASIC1.53□□□□□ -2.16
IGHV4-30-4P0DP06 SNORA79-201ENST00000408376 140 ntBASIC1.53□□□□□ -2.16
IGHV4-30-4P0DP06 MIR1267-201ENST00000408723 78 ntBASIC1.53□□□□□ -2.16
IGHV4-30-4P0DP06 AC006461.1-201ENST00000412637 326 ntBASIC1.53□□□□□ -2.16
IGHV4-30-4P0DP06 HMGN2P19-201ENST00000425149 265 ntBASIC1.53□□□□□ -2.16
IGHV4-30-4P0DP06 JTBP1-201ENST00000441314 247 ntBASIC1.53□□□□□ -2.16
IGHV4-30-4P0DP06 RNU6-295P-201ENST00000516901 104 ntBASIC1.53□□□□□ -2.16
IGHV4-30-4P0DP06 MIR4662B-201ENST00000579498 81 ntBASIC1.53□□□□□ -2.16
IGHV4-30-4P0DP06 MIR4431-201ENST00000579990 94 ntBASIC1.53□□□□□ -2.16
IGHV4-30-4P0DP06 AL627230.6-201ENST00000611129 280 ntBASIC1.53□□□□□ -2.16
IGHV4-30-4P0DP06 AL353997.5-201ENST00000618886 171 ntBASIC1.53□□□□□ -2.16
IGHV4-30-4P0DP06 AC027279.3-201ENST00000625055 122 ntBASIC1.53□□□□□ -2.16
IGHV4-30-4P0DP06 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.53□□□□□ -2.16
IGHV4-30-4P0DP06 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.53□□□□□ -2.17
IGHV4-30-4P0DP06 RNU6-833P-201ENST00000363486 107 ntBASIC1.52□□□□□ -2.17
IGHV4-30-4P0DP06 Y_RNA.634-201ENST00000364811 113 ntBASIC1.52□□□□□ -2.17
IGHV4-30-4P0DP06 RNA5SP37-201ENST00000365420 130 ntBASIC1.52□□□□□ -2.17
IGHV4-30-4P0DP06 RNU6-643P-201ENST00000384018 107 ntBASIC1.52□□□□□ -2.17
IGHV4-30-4P0DP06 MIR583-201ENST00000384846 75 ntBASIC1.52□□□□□ -2.17
IGHV4-30-4P0DP06 MIR676-201ENST00000390702 67 ntBASIC1.52□□□□□ -2.17
IGHV4-30-4P0DP06 RNU4-43P-201ENST00000410628 137 ntBASIC1.52□□□□□ -2.17
IGHV4-30-4P0DP06 HMGN2P32-201ENST00000444648 269 ntBASIC1.52□□□□□ -2.17
IGHV4-30-4P0DP06 AC104435.1-201ENST00000483483 166 ntBASIC1.52□□□□□ -2.17
IGHV4-30-4P0DP06 RNU6-197P-201ENST00000516680 100 ntBASIC1.52□□□□□ -2.17
IGHV4-30-4P0DP06 SUMO2P16-201ENST00000519475 264 ntBASIC1.52□□□□□ -2.17
IGHV4-30-4P0DP06 AC103810.8-201ENST00000607347 118 ntBASIC1.52□□□□□ -2.17
IGHV4-30-4P0DP06 AC104465.1-201ENST00000611365 139 ntBASIC1.52□□□□□ -2.17
IGHV4-30-4P0DP06 Y_RNA.783-201ENST00000613546 102 ntBASIC1.52□□□□□ -2.17
IGHV4-30-4P0DP06 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
IGHV4-30-4P0DP06 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
IGHV4-30-4P0DP06 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.52□□□□□ -2.17
IGHV4-30-4P0DP06 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
IGHV4-30-4P0DP06 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
IGHV4-30-4P0DP06 ZNF720P1-201ENST00000562403 1939 ntBASIC1.51□□□□□ -2.17
IGHV4-30-4P0DP06 RNU6-1123P-201ENST00000362347 106 ntBASIC1.51□□□□□ -2.17
IGHV4-30-4P0DP06 Y_RNA.180-201ENST00000363867 113 ntBASIC1.51□□□□□ -2.17
IGHV4-30-4P0DP06 Y_RNA.336-201ENST00000365307 109 ntBASIC1.51□□□□□ -2.17
IGHV4-30-4P0DP06 Y_RNA.357-201ENST00000365487 109 ntBASIC1.51□□□□□ -2.17
IGHV4-30-4P0DP06 MIR194-1-201ENST00000384892 85 ntBASIC1.51□□□□□ -2.17
IGHV4-30-4P0DP06 AC004965.1-201ENST00000413033 213 ntBASIC1.51□□□□□ -2.17
IGHV4-30-4P0DP06 RNA5SP233-201ENST00000459153 113 ntBASIC1.51□□□□□ -2.17
IGHV4-30-4P0DP06 Y_RNA.666-201ENST00000516187 112 ntBASIC1.51□□□□□ -2.17
IGHV4-30-4P0DP06 MIR6840-201ENST00000611937 71 ntBASIC1.51□□□□□ -2.17
IGHV4-30-4P0DP06 AC106754.2-201ENST00000623006 233 ntBASIC1.51□□□□□ -2.17
IGHV4-30-4P0DP06 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
IGHV4-30-4P0DP06 RNU6-268P-201ENST00000364174 107 ntBASIC1.5□□□□□ -2.17
IGHV4-30-4P0DP06 Y_RNA.242-201ENST00000364473 110 ntBASIC1.5□□□□□ -2.17
IGHV4-30-4P0DP06 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
IGHV4-30-4P0DP06 U8.13-201ENST00000390842 128 ntBASIC1.5□□□□□ -2.17
IGHV4-30-4P0DP06 SNORA26-201ENST00000391286 122 ntBASIC1.5□□□□□ -2.17
IGHV4-30-4P0DP06 AL161935.2-201ENST00000414627 60 ntBASIC1.5□□□□□ -2.17
IGHV4-30-4P0DP06 SNRPGP14-201ENST00000435400 219 ntBASIC1.5□□□□□ -2.17
IGHV4-30-4P0DP06 HMGN2P23-201ENST00000456759 269 ntBASIC1.5□□□□□ -2.17
IGHV4-30-4P0DP06 AC107027.2-201ENST00000512197 115 ntBASIC1.5□□□□□ -2.17
IGHV4-30-4P0DP06 RNA5SP153-201ENST00000516498 76 ntBASIC1.5□□□□□ -2.17
IGHV4-30-4P0DP06 RNU6-126P-201ENST00000516685 103 ntBASIC1.5□□□□□ -2.17
IGHV4-30-4P0DP06 RNU6-365P-201ENST00000517113 106 ntBASIC1.5□□□□□ -2.17
IGHV4-30-4P0DP06 MIR8074-201ENST00000615081 81 ntBASIC1.5□□□□□ -2.17
IGHV4-30-4P0DP06 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.5□□□□□ -2.17
IGHV4-30-4P0DP06 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
IGHV4-30-4P0DP06 Y_RNA.8-201ENST00000362353 102 ntBASIC1.49□□□□□ -2.17
IGHV4-30-4P0DP06 Y_RNA.66-201ENST00000362862 102 ntBASIC1.49□□□□□ -2.17
IGHV4-30-4P0DP06 RNU6-457P-201ENST00000363999 107 ntBASIC1.49□□□□□ -2.17
IGHV4-30-4P0DP06 RNU4-84P-201ENST00000364200 139 ntBASIC1.49□□□□□ -2.17
IGHV4-30-4P0DP06 Y_RNA.272-201ENST00000364696 102 ntBASIC1.49□□□□□ -2.17
IGHV4-30-4P0DP06 RNA5SP259-201ENST00000365541 109 ntBASIC1.49□□□□□ -2.17
IGHV4-30-4P0DP06 Y_RNA.441-201ENST00000384123 112 ntBASIC1.49□□□□□ -2.17
IGHV4-30-4P0DP06 MIR513A1-201ENST00000385138 129 ntBASIC1.49□□□□□ -2.17
IGHV4-30-4P0DP06 MIR516B2-201ENST00000385190 85 ntBASIC1.49□□□□□ -2.17
IGHV4-30-4P0DP06 SNORA26.9-201ENST00000391322 122 ntBASIC1.49□□□□□ -2.17
IGHV4-30-4P0DP06 RNU6-1135P-201ENST00000411083 103 ntBASIC1.49□□□□□ -2.17
IGHV4-30-4P0DP06 AC005908.1-201ENST00000468701 347 ntBASIC1.49□□□□□ -2.17
IGHV4-30-4P0DP06 RNU6-1270P-201ENST00000517128 108 ntBASIC1.49□□□□□ -2.17
IGHV4-30-4P0DP06 SNORA77B-201ENST00000578179 125 ntBASIC1.49□□□□□ -2.17
IGHV4-30-4P0DP06 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
IGHV4-30-4P0DP06 AL359851.1-201ENST00000569460 4997 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms