Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.24□□□□□ -2.61
APOBP04114 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.24□□□□□ -2.61
APOBP04114 RNU6-384P-201ENST00000364900 104 ntBASIC-1.24□□□□□ -2.61
APOBP04114 RNU6-245P-201ENST00000384020 107 ntBASIC-1.24□□□□□ -2.61
APOBP04114 RNU6-131P-201ENST00000391144 107 ntBASIC-1.24□□□□□ -2.61
APOBP04114 SEPT14P24-201ENST00000447236 180 ntBASIC-1.24□□□□□ -2.61
APOBP04114 SEPT14P4-201ENST00000513445 186 ntBASIC-1.24□□□□□ -2.61
APOBP04114 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.24□□□□□ -2.61
APOBP04114 AL445264.1-201ENST00000621719 171 ntBASIC-1.24□□□□□ -2.61
APOBP04114 RNY4P9-201ENST00000363194 97 ntBASIC-1.25□□□□□ -2.61
APOBP04114 SNORD68-201ENST00000363214 84 ntBASIC-1.25□□□□□ -2.61
APOBP04114 RNU6-154P-201ENST00000384306 106 ntBASIC-1.25□□□□□ -2.61
APOBP04114 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-1.25□□□□□ -2.61
APOBP04114 RNU7-104P-201ENST00000459398 79 ntBASIC-1.25□□□□□ -2.61
APOBP04114 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.25□□□□□ -2.61
APOBP04114 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.25□□□□□ -2.61
APOBP04114 MIR4762-201ENST00000585261 75 ntBASIC-1.25□□□□□ -2.61
APOBP04114 SNORD115-12-201ENST00000362583 82 ntBASIC-1.25□□□□□ -2.61
APOBP04114 SNORD115-9-201ENST00000362912 82 ntBASIC-1.25□□□□□ -2.61
APOBP04114 SNORD115-19-201ENST00000363098 82 ntBASIC-1.25□□□□□ -2.61
APOBP04114 SNORD115-18-201ENST00000363293 82 ntBASIC-1.25□□□□□ -2.61
APOBP04114 SNORD115-17-201ENST00000364612 82 ntBASIC-1.25□□□□□ -2.61
APOBP04114 SNORD115-20-201ENST00000365099 82 ntBASIC-1.25□□□□□ -2.61
APOBP04114 RNU6-841P-201ENST00000383872 107 ntBASIC-1.25□□□□□ -2.61
APOBP04114 AC018880.2-201ENST00000414265 201 ntBASIC-1.25□□□□□ -2.61
APOBP04114 AC084290.1-201ENST00000434995 374 ntBASIC-1.25□□□□□ -2.61
APOBP04114 RNU7-161P-201ENST00000517289 62 ntBASIC-1.25□□□□□ -2.61
APOBP04114 MTND3P13-201ENST00000574391 343 ntBASIC-1.25□□□□□ -2.61
APOBP04114 AC023158.2-201ENST00000614876 543 ntBASIC-1.25□□□□□ -2.61
APOBP04114 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.25□□□□□ -2.61
APOBP04114 MIR20A-201ENST00000362279 71 ntBASIC-1.25□□□□□ -2.61
APOBP04114 MTATP6P13-201ENST00000438531 667 ntBASIC-1.25□□□□□ -2.61
APOBP04114 RNU6-54P-201ENST00000365563 107 ntBASIC-1.25□□□□□ -2.61
APOBP04114 RNU6-258P-201ENST00000390884 101 ntBASIC-1.25□□□□□ -2.61
APOBP04114 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.26□□□□□ -2.61
APOBP04114 RNU6-549P-201ENST00000384433 107 ntBASIC-1.26□□□□□ -2.61
APOBP04114 RNU4-88P-201ENST00000411220 86 ntBASIC-1.26□□□□□ -2.61
APOBP04114 EPS15P1-201ENST00000448836 336 ntBASIC-1.26□□□□□ -2.61
APOBP04114 AC117522.1-201ENST00000509821 380 ntBASIC-1.26□□□□□ -2.61
APOBP04114 RNU6-830P-201ENST00000516353 107 ntBASIC-1.26□□□□□ -2.61
APOBP04114 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.26□□□□□ -2.61
APOBP04114 EIF1AXP2-201ENST00000555940 413 ntBASIC-1.26□□□□□ -2.61
APOBP04114 RNU6-324P-201ENST00000363957 106 ntBASIC-1.26□□□□□ -2.61
APOBP04114 AC090844.1-201ENST00000422019 156 ntBASIC-1.26□□□□□ -2.61
APOBP04114 MTCO2P6-201ENST00000463134 685 ntBASIC-1.26□□□□□ -2.61
APOBP04114 DEFB108A-201ENST00000530110 222 ntBASIC-1.26□□□□□ -2.61
APOBP04114 AC006435.5-201ENST00000624486 112 ntBASIC-1.26□□□□□ -2.61
APOBP04114 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.26□□□□□ -2.61
APOBP04114 RNU6-291P-201ENST00000384720 107 ntBASIC-1.26□□□□□ -2.61
APOBP04114 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.26□□□□□ -2.61
APOBP04114 RNU7-53P-201ENST00000516705 60 ntBASIC-1.26□□□□□ -2.61
APOBP04114 AC104576.1-201ENST00000524225 88 ntBASIC-1.26□□□□□ -2.61
APOBP04114 AP001282.2-201ENST00000616149 309 ntBASIC-1.26□□□□□ -2.61
APOBP04114 AC008873.1-201ENST00000625051 138 ntBASIC-1.26□□□□□ -2.61
APOBP04114 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.27□□□□□ -2.61
APOBP04114 MTND4P18-201ENST00000447010 465 ntBASIC-1.27□□□□□ -2.61
APOBP04114 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.27□□□□□ -2.61
APOBP04114 AC138915.2-201ENST00000569776 97 ntBASIC-1.27□□□□□ -2.61
APOBP04114 MIR4666A-201ENST00000580160 79 ntBASIC-1.27□□□□□ -2.61
APOBP04114 RNU6-865P-201ENST00000364772 107 ntBASIC-1.27□□□□□ -2.61
APOBP04114 RNU6-905P-201ENST00000384434 107 ntBASIC-1.27□□□□□ -2.61
APOBP04114 MIR487B-201ENST00000385021 84 ntBASIC-1.27□□□□□ -2.61
APOBP04114 FGF7P6-202ENST00000451282 293 ntBASIC-1.27□□□□□ -2.61
APOBP04114 RNU4-24P-201ENST00000364565 139 ntBASIC-1.27□□□□□ -2.61
APOBP04114 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.27□□□□□ -2.61
APOBP04114 MIR548I3-201ENST00000408378 149 ntBASIC-1.27□□□□□ -2.61
APOBP04114 AL133153.1-201ENST00000557756 303 ntBASIC-1.27□□□□□ -2.61
APOBP04114 MTND5P34-201ENST00000568888 325 ntBASIC-1.27□□□□□ -2.61
APOBP04114 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.27□□□□□ -2.61
APOBP04114 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.27□□□□□ -2.61
APOBP04114 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-1.27□□□□□ -2.61
APOBP04114 RN7SKP299-201ENST00000606679 301 ntBASIC-1.27□□□□□ -2.61
APOBP04114 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.27□□□□□ -2.61
APOBP04114 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.28□□□□□ -2.61
APOBP04114 AC010587.1-201ENST00000505809 469 ntBASIC-1.28□□□□□ -2.61
APOBP04114 AC139792.3-201ENST00000623525 224 ntBASIC-1.28□□□□□ -2.61
APOBP04114 SNORD115-23-201ENST00000364461 82 ntBASIC-1.28□□□□□ -2.61
APOBP04114 MIR217-201ENST00000384817 110 ntBASIC-1.28□□□□□ -2.61
APOBP04114 MIR522-201ENST00000385071 87 ntBASIC-1.28□□□□□ -2.61
APOBP04114 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.28□□□□□ -2.61
APOBP04114 RNU2-39P-201ENST00000410604 198 ntBASIC-1.28□□□□□ -2.61
APOBP04114 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.28□□□□□ -2.61
APOBP04114 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-1.28□□□□□ -2.61
APOBP04114 MTND1P7-201ENST00000632801 297 ntBASIC-1.28□□□□□ -2.61
APOBP04114 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.28□□□□□ -2.61
APOBP04114 RNU6-926P-201ENST00000384075 107 ntBASIC-1.28□□□□□ -2.61
APOBP04114 RNU6-190P-201ENST00000384154 102 ntBASIC-1.28□□□□□ -2.61
APOBP04114 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.28□□□□□ -2.61
APOBP04114 RNU2-51P-201ENST00000410708 197 ntBASIC-1.28□□□□□ -2.61
APOBP04114 RNU2-10P-201ENST00000516375 211 ntBASIC-1.28□□□□□ -2.61
APOBP04114 AC072039.2-201ENST00000608883 439 ntBASIC-1.28□□□□□ -2.61
APOBP04114 MIR8068-201ENST00000618032 68 ntBASIC-1.28□□□□□ -2.61
APOBP04114 RNU6-227P-201ENST00000362865 103 ntBASIC-1.28□□□□□ -2.62
APOBP04114 MIR3123-201ENST00000583417 75 ntBASIC-1.28□□□□□ -2.62
APOBP04114 AL163152.1-201ENST00000642001 374 ntBASIC-1.28□□□□□ -2.62
APOBP04114 SNORA72.3-201ENST00000365074 132 ntBASIC-1.29□□□□□ -2.62
APOBP04114 RNA5SP237-201ENST00000410414 113 ntBASIC-1.29□□□□□ -2.62
APOBP04114 RNU6-583P-201ENST00000516012 92 ntBASIC-1.29□□□□□ -2.62
APOBP04114 RNU6-168P-201ENST00000516189 101 ntBASIC-1.29□□□□□ -2.62
APOBP04114 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms