Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RNU6-661P-201ENST00000362409 107 ntBASIC1.76□□□□□ -2.13
LDLRP01130 RNU6-407P-201ENST00000365280 104 ntBASIC1.76□□□□□ -2.13
LDLRP01130 RNU4-11P-201ENST00000365287 132 ntBASIC1.76□□□□□ -2.13
LDLRP01130 RNU6-117P-201ENST00000365415 107 ntBASIC1.76□□□□□ -2.13
LDLRP01130 SNORA36B-201ENST00000410438 131 ntBASIC1.76□□□□□ -2.13
LDLRP01130 AP1B1P2-201ENST00000416196 106 ntBASIC1.76□□□□□ -2.13
LDLRP01130 CST2P1-201ENST00000425770 87 ntBASIC1.76□□□□□ -2.13
LDLRP01130 HSPE1P13-201ENST00000451143 297 ntBASIC1.76□□□□□ -2.13
LDLRP01130 RNU7-197P-201ENST00000458836 62 ntBASIC1.76□□□□□ -2.13
LDLRP01130 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.76□□□□□ -2.13
LDLRP01130 AC010598.1-201ENST00000510378 103 ntBASIC1.76□□□□□ -2.13
LDLRP01130 SNORA70.12-201ENST00000516084 153 ntBASIC1.76□□□□□ -2.13
LDLRP01130 MIR548X2-201ENST00000579776 100 ntBASIC1.76□□□□□ -2.13
LDLRP01130 MIR3684-201ENST00000579779 74 ntBASIC1.76□□□□□ -2.13
LDLRP01130 MIR5688-201ENST00000580619 83 ntBASIC1.76□□□□□ -2.13
LDLRP01130 SNRPGP19-201ENST00000603826 189 ntBASIC1.76□□□□□ -2.13
LDLRP01130 AP003357.1-201ENST00000604497 148 ntBASIC1.76□□□□□ -2.13
LDLRP01130 AC069114.2-201ENST00000604699 304 ntBASIC1.76□□□□□ -2.13
LDLRP01130 AL391903.3-201ENST00000612158 163 ntBASIC1.76□□□□□ -2.13
LDLRP01130 MIR548AY-201ENST00000617669 107 ntBASIC1.76□□□□□ -2.13
LDLRP01130 AC068647.2-201ENST00000637380 353 ntBASIC1.76□□□□□ -2.13
LDLRP01130 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
LDLRP01130 RNU6-1290P-201ENST00000362957 109 ntBASIC1.75□□□□□ -2.13
LDLRP01130 RNU6-144P-201ENST00000383951 107 ntBASIC1.75□□□□□ -2.13
LDLRP01130 RNU6-1081P-201ENST00000384537 107 ntBASIC1.75□□□□□ -2.13
LDLRP01130 SNORA8-201ENST00000384574 139 ntBASIC1.75□□□□□ -2.13
LDLRP01130 SNORA22C-201ENST00000384614 134 ntBASIC1.75□□□□□ -2.13
LDLRP01130 SNORA20-201ENST00000384662 132 ntBASIC1.75□□□□□ -2.13
LDLRP01130 RNU6-1168P-201ENST00000390831 104 ntBASIC1.75□□□□□ -2.13
LDLRP01130 AL606845.1-201ENST00000404881 255 ntBASIC1.75□□□□□ -2.13
LDLRP01130 RNU2-51P-201ENST00000410708 197 ntBASIC1.75□□□□□ -2.13
LDLRP01130 MTATP6P29-201ENST00000415057 132 ntBASIC1.75□□□□□ -2.13
LDLRP01130 MTND4LP9-201ENST00000427694 174 ntBASIC1.75□□□□□ -2.13
LDLRP01130 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.75□□□□□ -2.13
LDLRP01130 HSPE1P21-201ENST00000438283 308 ntBASIC1.75□□□□□ -2.13
LDLRP01130 RPS26P55-201ENST00000471178 356 ntBASIC1.75□□□□□ -2.13
LDLRP01130 RNU6-479P-201ENST00000516348 105 ntBASIC1.75□□□□□ -2.13
LDLRP01130 RNU6-63P-201ENST00000516690 95 ntBASIC1.75□□□□□ -2.13
LDLRP01130 AC084364.2-201ENST00000546924 395 ntBASIC1.75□□□□□ -2.13
LDLRP01130 MIR4438-201ENST00000585271 93 ntBASIC1.75□□□□□ -2.13
LDLRP01130 DNAJC19P2-201ENST00000593340 302 ntBASIC1.75□□□□□ -2.13
LDLRP01130 AC091895.1-201ENST00000624494 256 ntBASIC1.75□□□□□ -2.13
LDLRP01130 AC010332.2-201ENST00000613083 1904 ntBASIC1.75□□□□□ -2.13
LDLRP01130 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
LDLRP01130 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
LDLRP01130 RNU6-1323P-201ENST00000384025 107 ntBASIC1.74□□□□□ -2.13
LDLRP01130 RNU4-62P-201ENST00000410125 130 ntBASIC1.74□□□□□ -2.13
LDLRP01130 RNU6-735P-201ENST00000410612 107 ntBASIC1.74□□□□□ -2.13
LDLRP01130 RNA5SP100-201ENST00000410903 110 ntBASIC1.74□□□□□ -2.13
LDLRP01130 RNA5SP59-201ENST00000410922 110 ntBASIC1.74□□□□□ -2.13
LDLRP01130 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.74□□□□□ -2.13
LDLRP01130 snoU13.18-201ENST00000459483 104 ntBASIC1.74□□□□□ -2.13
LDLRP01130 AC107027.2-201ENST00000512197 115 ntBASIC1.74□□□□□ -2.13
LDLRP01130 RNA5SP20-201ENST00000515976 84 ntBASIC1.74□□□□□ -2.13
LDLRP01130 SNORA25.12-201ENST00000516202 82 ntBASIC1.74□□□□□ -2.13
LDLRP01130 SNORA25.15-201ENST00000516487 89 ntBASIC1.74□□□□□ -2.13
LDLRP01130 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.74□□□□□ -2.13
LDLRP01130 RNU1-142P-201ENST00000516682 145 ntBASIC1.74□□□□□ -2.13
LDLRP01130 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.74□□□□□ -2.13
LDLRP01130 AC127455.1-201ENST00000565496 145 ntBASIC1.74□□□□□ -2.13
LDLRP01130 SUB1P4-201ENST00000566062 339 ntBASIC1.74□□□□□ -2.13
LDLRP01130 MIR4724-201ENST00000579485 89 ntBASIC1.74□□□□□ -2.13
LDLRP01130 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.74□□□□□ -2.13
LDLRP01130 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.74□□□□□ -2.13
LDLRP01130 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.74□□□□□ -2.13
LDLRP01130 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LDLRP01130 Y_RNA.218-201ENST00000364218 104 ntBASIC1.73□□□□□ -2.13
LDLRP01130 RNU6-1019P-201ENST00000364424 107 ntBASIC1.73□□□□□ -2.13
LDLRP01130 RNU6-643P-201ENST00000384018 107 ntBASIC1.73□□□□□ -2.13
LDLRP01130 MIR15B-201ENST00000385045 98 ntBASIC1.73□□□□□ -2.13
LDLRP01130 RNU6-1228P-201ENST00000391014 107 ntBASIC1.73□□□□□ -2.13
LDLRP01130 RNA5SP212-201ENST00000391223 107 ntBASIC1.73□□□□□ -2.13
LDLRP01130 RNA5SP511-201ENST00000410487 115 ntBASIC1.73□□□□□ -2.13
LDLRP01130 RNU2-7P-201ENST00000410794 178 ntBASIC1.73□□□□□ -2.13
LDLRP01130 AC006461.1-201ENST00000412637 326 ntBASIC1.73□□□□□ -2.13
LDLRP01130 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.73□□□□□ -2.13
LDLRP01130 AC245047.4-201ENST00000433189 144 ntBASIC1.73□□□□□ -2.13
LDLRP01130 AL121914.1-201ENST00000450188 156 ntBASIC1.73□□□□□ -2.13
LDLRP01130 SNRPGP8-201ENST00000454064 226 ntBASIC1.73□□□□□ -2.13
LDLRP01130 AL163195.1-201ENST00000496941 348 ntBASIC1.73□□□□□ -2.13
LDLRP01130 AC015720.1-201ENST00000565251 277 ntBASIC1.73□□□□□ -2.13
LDLRP01130 MIR4419B-201ENST00000577260 68 ntBASIC1.73□□□□□ -2.13
LDLRP01130 AC005972.2-201ENST00000604690 348 ntBASIC1.73□□□□□ -2.13
LDLRP01130 AL359075.3-201ENST00000613288 217 ntBASIC1.73□□□□□ -2.13
LDLRP01130 U6.73-201ENST00000619194 103 ntBASIC1.73□□□□□ -2.13
LDLRP01130 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LDLRP01130 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
LDLRP01130 RNU6-112P-201ENST00000363599 104 ntBASIC1.72□□□□□ -2.13
LDLRP01130 Y_RNA.261-201ENST00000364631 102 ntBASIC1.72□□□□□ -2.13
LDLRP01130 Y_RNA.542-201ENST00000384641 111 ntBASIC1.72□□□□□ -2.13
LDLRP01130 RNU6-768P-201ENST00000384683 107 ntBASIC1.72□□□□□ -2.13
LDLRP01130 RNU6-1154P-201ENST00000391001 104 ntBASIC1.72□□□□□ -2.13
LDLRP01130 AC092991.1-201ENST00000477176 376 ntBASIC1.72□□□□□ -2.13
LDLRP01130 RNU6-971P-201ENST00000516920 106 ntBASIC1.72□□□□□ -2.13
LDLRP01130 SNORA31.17-201ENST00000516953 127 ntBASIC1.72□□□□□ -2.13
LDLRP01130 MIR3618-201ENST00000580330 88 ntBASIC1.72□□□□□ -2.13
LDLRP01130 POLR3GP1-201ENST00000594073 261 ntBASIC1.72□□□□□ -2.13
LDLRP01130 AL021707.8-201ENST00000609428 183 ntBASIC1.72□□□□□ -2.13
LDLRP01130 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.72□□□□□ -2.13
LDLRP01130 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms