Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RNU6-991P-201ENST00000516168 107 ntBASIC3.54□□□□□ -1.84
ALDH1A1P00352 RNU6-1041P-201ENST00000516254 102 ntBASIC3.54□□□□□ -1.84
ALDH1A1P00352 MIR5047-201ENST00000579212 100 ntBASIC3.54□□□□□ -1.84
ALDH1A1P00352 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.54□□□□□ -1.84
ALDH1A1P00352 AL353149.1-201ENST00000610667 244 ntBASIC3.54□□□□□ -1.84
ALDH1A1P00352 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ALDH1A1P00352 RNU6-1313P-201ENST00000362622 102 ntBASIC3.53□□□□□ -1.84
ALDH1A1P00352 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
ALDH1A1P00352 SNORA80E-201ENST00000384744 137 ntBASIC3.53□□□□□ -1.84
ALDH1A1P00352 MIR1270-201ENST00000459320 83 ntBASIC3.53□□□□□ -1.84
ALDH1A1P00352 RNU7-94P-201ENST00000459576 63 ntBASIC3.53□□□□□ -1.84
ALDH1A1P00352 RN7SL330P-201ENST00000469709 307 ntBASIC3.53□□□□□ -1.84
ALDH1A1P00352 SCARNA3-201ENST00000517097 143 ntBASIC3.53□□□□□ -1.84
ALDH1A1P00352 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.53□□□□□ -1.84
ALDH1A1P00352 AC092881.1-201ENST00000638218 2733 ntBASIC3.53□□□□□ -1.84
ALDH1A1P00352 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ALDH1A1P00352 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
ALDH1A1P00352 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.52□□□□□ -1.85
ALDH1A1P00352 SNORD115-2-201ENST00000362842 82 ntBASIC3.52□□□□□ -1.85
ALDH1A1P00352 Y_RNA.171-201ENST00000363760 102 ntBASIC3.52□□□□□ -1.85
ALDH1A1P00352 SNORD115-20-201ENST00000365099 82 ntBASIC3.52□□□□□ -1.85
ALDH1A1P00352 AC009414.1-201ENST00000427200 443 ntBASIC3.52□□□□□ -1.85
ALDH1A1P00352 RNU7-96P-201ENST00000459535 64 ntBASIC3.52□□□□□ -1.85
ALDH1A1P00352 RNU6-1258P-201ENST00000516911 111 ntBASIC3.52□□□□□ -1.85
ALDH1A1P00352 AC096720.1-201ENST00000604441 183 ntBASIC3.52□□□□□ -1.85
ALDH1A1P00352 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.52□□□□□ -1.85
ALDH1A1P00352 AL021368.2-201ENST00000606125 5352 ntBASIC3.51□□□□□ -1.85
ALDH1A1P00352 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ALDH1A1P00352 SNORA70B-201ENST00000384210 135 ntBASIC3.51□□□□□ -1.85
ALDH1A1P00352 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.51□□□□□ -1.85
ALDH1A1P00352 AL031183.1-201ENST00000457667 207 ntBASIC3.51□□□□□ -1.85
ALDH1A1P00352 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
ALDH1A1P00352 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ALDH1A1P00352 AC091564.4-201ENST00000533934 2194 ntBASIC3.51□□□□□ -1.85
ALDH1A1P00352 AC096644.4-201ENST00000563417 2912 ntBASIC3.5□□□□□ -1.85
ALDH1A1P00352 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ALDH1A1P00352 RNU6-1229P-201ENST00000364295 107 ntBASIC3.5□□□□□ -1.85
ALDH1A1P00352 SNORD67-201ENST00000390833 111 ntBASIC3.5□□□□□ -1.85
ALDH1A1P00352 RNU2-48P-201ENST00000410694 191 ntBASIC3.5□□□□□ -1.85
ALDH1A1P00352 AC087499.2-201ENST00000432861 149 ntBASIC3.5□□□□□ -1.85
ALDH1A1P00352 RNU7-113P-201ENST00000459273 62 ntBASIC3.5□□□□□ -1.85
ALDH1A1P00352 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.5□□□□□ -1.85
ALDH1A1P00352 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
ALDH1A1P00352 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
ALDH1A1P00352 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
ALDH1A1P00352 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ALDH1A1P00352 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ALDH1A1P00352 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.49□□□□□ -1.85
ALDH1A1P00352 AC008264.2-201ENST00000610193 3731 ntBASIC3.49□□□□□ -1.85
ALDH1A1P00352 SNORA1.1-201ENST00000364671 133 ntBASIC3.49□□□□□ -1.85
ALDH1A1P00352 Y_RNA.494-201ENST00000384432 111 ntBASIC3.49□□□□□ -1.85
ALDH1A1P00352 Y_RNA.565-201ENST00000384719 101 ntBASIC3.49□□□□□ -1.85
ALDH1A1P00352 MIR196B-201ENST00000384852 84 ntBASIC3.49□□□□□ -1.85
ALDH1A1P00352 SNORD77B-201ENST00000391112 67 ntBASIC3.49□□□□□ -1.85
ALDH1A1P00352 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.49□□□□□ -1.85
ALDH1A1P00352 AC069257.2-201ENST00000441819 155 ntBASIC3.49□□□□□ -1.85
ALDH1A1P00352 RNU6-711P-201ENST00000517255 106 ntBASIC3.49□□□□□ -1.85
ALDH1A1P00352 MIR4712-201ENST00000583750 82 ntBASIC3.49□□□□□ -1.85
ALDH1A1P00352 ZNF861P-201ENST00000588126 639 ntBASIC3.49□□□□□ -1.85
ALDH1A1P00352 CTSLP2-204ENST00000629029 392 ntBASIC3.49□□□□□ -1.85
ALDH1A1P00352 AL512310.12-203ENST00000640543 90 ntBASIC3.49□□□□□ -1.85
ALDH1A1P00352 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
ALDH1A1P00352 RNU1-23P-201ENST00000363361 144 ntBASIC3.48□□□□□ -1.85
ALDH1A1P00352 Y_RNA.241-201ENST00000364470 117 ntBASIC3.48□□□□□ -1.85
ALDH1A1P00352 SNORA8-201ENST00000384574 139 ntBASIC3.48□□□□□ -1.85
ALDH1A1P00352 MIR95-201ENST00000385072 81 ntBASIC3.48□□□□□ -1.85
ALDH1A1P00352 RNU6-1328P-201ENST00000410938 106 ntBASIC3.48□□□□□ -1.85
ALDH1A1P00352 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.48□□□□□ -1.85
ALDH1A1P00352 AC090844.1-201ENST00000422019 156 ntBASIC3.48□□□□□ -1.85
ALDH1A1P00352 MICF-203ENST00000432679 129 ntBASIC3.48□□□□□ -1.85
ALDH1A1P00352 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.48□□□□□ -1.85
ALDH1A1P00352 AC108729.3-201ENST00000513484 108 ntBASIC3.48□□□□□ -1.85
ALDH1A1P00352 SCARNA11.3-201ENST00000517276 130 ntBASIC3.48□□□□□ -1.85
ALDH1A1P00352 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.48□□□□□ -1.85
ALDH1A1P00352 MIR7843-201ENST00000622274 79 ntBASIC3.48□□□□□ -1.85
ALDH1A1P00352 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
ALDH1A1P00352 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.47□□□□□ -1.85
ALDH1A1P00352 MAPK10-322ENST00000641485 4530 ntBASIC3.47□□□□□ -1.85
ALDH1A1P00352 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
ALDH1A1P00352 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ALDH1A1P00352 RNA5SP323-201ENST00000391094 133 ntBASIC3.47□□□□□ -1.85
ALDH1A1P00352 AL161788.1-201ENST00000441805 169 ntBASIC3.47□□□□□ -1.85
ALDH1A1P00352 MIR3186-201ENST00000577404 85 ntBASIC3.47□□□□□ -1.85
ALDH1A1P00352 MIR548AE2-201ENST00000583456 67 ntBASIC3.47□□□□□ -1.85
ALDH1A1P00352 AC103810.7-201ENST00000607821 91 ntBASIC3.47□□□□□ -1.85
ALDH1A1P00352 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.47□□□□□ -1.85
ALDH1A1P00352 MIR376B-201ENST00000614515 100 ntBASIC3.47□□□□□ -1.85
ALDH1A1P00352 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
ALDH1A1P00352 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
ALDH1A1P00352 AL442644.1-201ENST00000454390 3105 ntBASIC3.46□□□□□ -1.85
ALDH1A1P00352 SNORD115-34-201ENST00000362441 82 ntBASIC3.46□□□□□ -1.86
ALDH1A1P00352 SNORD115-12-201ENST00000362583 82 ntBASIC3.46□□□□□ -1.86
ALDH1A1P00352 SNORD115-29-201ENST00000362834 82 ntBASIC3.46□□□□□ -1.86
ALDH1A1P00352 SNORD115-9-201ENST00000362912 82 ntBASIC3.46□□□□□ -1.86
ALDH1A1P00352 SNORD115-21-201ENST00000362963 81 ntBASIC3.46□□□□□ -1.86
ALDH1A1P00352 SNORD115-14-201ENST00000363090 81 ntBASIC3.46□□□□□ -1.86
ALDH1A1P00352 SNORD115-41-201ENST00000363608 82 ntBASIC3.46□□□□□ -1.86
ALDH1A1P00352 SNORD115-11-201ENST00000363616 82 ntBASIC3.46□□□□□ -1.86
ALDH1A1P00352 SNORD115-5-201ENST00000363633 82 ntBASIC3.46□□□□□ -1.86
ALDH1A1P00352 SNORD115-39-201ENST00000363694 82 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms