Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AC011476.5-201ENST00000615594 130 ntBASIC0.36□□□□□ -2.35
BRD4O60885 U2.1-201ENST00000618978 145 ntBASIC0.36□□□□□ -2.35
BRD4O60885 TPTEP1-208ENST00000636884 213 ntBASIC0.36□□□□□ -2.35
BRD4O60885 Y_RNA.148-201ENST00000363557 117 ntBASIC0.35□□□□□ -2.35
BRD4O60885 RNY3P11-201ENST00000364153 102 ntBASIC0.35□□□□□ -2.35
BRD4O60885 Y_RNA.341-201ENST00000365341 102 ntBASIC0.35□□□□□ -2.35
BRD4O60885 RNU6-945P-201ENST00000383947 107 ntBASIC0.35□□□□□ -2.35
BRD4O60885 RNU6-1323P-201ENST00000384025 107 ntBASIC0.35□□□□□ -2.35
BRD4O60885 RNU6-890P-201ENST00000384121 107 ntBASIC0.35□□□□□ -2.35
BRD4O60885 MT-TL1-201ENST00000386347 75 ntBASIC0.35□□□□□ -2.35
BRD4O60885 RNU6-855P-201ENST00000410395 104 ntBASIC0.35□□□□□ -2.35
BRD4O60885 RNU6-1304P-201ENST00000411374 106 ntBASIC0.35□□□□□ -2.35
BRD4O60885 AL022718.1-201ENST00000412004 84 ntBASIC0.35□□□□□ -2.35
BRD4O60885 MCFD2P1-201ENST00000417812 300 ntBASIC0.35□□□□□ -2.35
BRD4O60885 MTND1P4-201ENST00000435196 415 ntBASIC0.35□□□□□ -2.35
BRD4O60885 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.35□□□□□ -2.35
BRD4O60885 AC099799.1-201ENST00000439809 192 ntBASIC0.35□□□□□ -2.35
BRD4O60885 FGF7P6-202ENST00000451282 293 ntBASIC0.35□□□□□ -2.35
BRD4O60885 MTND4P17-201ENST00000470444 350 ntBASIC0.35□□□□□ -2.35
BRD4O60885 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
BRD4O60885 RNU6-911P-201ENST00000516523 104 ntBASIC0.35□□□□□ -2.35
BRD4O60885 MIR5190-201ENST00000581537 80 ntBASIC0.35□□□□□ -2.35
BRD4O60885 Pinc.1-201ENST00000616452 154 ntBASIC0.35□□□□□ -2.35
BRD4O60885 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.35□□□□□ -2.35
BRD4O60885 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.35□□□□□ -2.35
BRD4O60885 Y_RNA.27-201ENST00000362540 103 ntBASIC0.34□□□□□ -2.35
BRD4O60885 RNU6-490P-201ENST00000362985 107 ntBASIC0.34□□□□□ -2.35
BRD4O60885 Y_RNA.146-201ENST00000363549 102 ntBASIC0.34□□□□□ -2.35
BRD4O60885 Y_RNA.279-201ENST00000364763 95 ntBASIC0.34□□□□□ -2.35
BRD4O60885 MIR802-201ENST00000390235 94 ntBASIC0.34□□□□□ -2.35
BRD4O60885 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.34□□□□□ -2.35
BRD4O60885 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.34□□□□□ -2.35
BRD4O60885 RN7SKP295-201ENST00000517264 153 ntBASIC0.34□□□□□ -2.35
BRD4O60885 MIR4300-201ENST00000581016 96 ntBASIC0.34□□□□□ -2.35
BRD4O60885 MIR548AR-201ENST00000582191 57 ntBASIC0.34□□□□□ -2.35
BRD4O60885 RBM11P1-201ENST00000604951 799 ntBASIC0.34□□□□□ -2.35
BRD4O60885 JPX_2.1-201ENST00000614161 69 ntBASIC0.34□□□□□ -2.35
BRD4O60885 U6atac.1-201ENST00000616025 117 ntBASIC0.34□□□□□ -2.35
BRD4O60885 MIR4251-201ENST00000635819 61 ntBASIC0.34□□□□□ -2.35
BRD4O60885 MIR1-1-201ENST00000362147 71 ntBASIC0.33□□□□□ -2.36
BRD4O60885 SNORD81.2-201ENST00000365153 76 ntBASIC0.33□□□□□ -2.36
BRD4O60885 RNU6-1175P-201ENST00000365200 107 ntBASIC0.33□□□□□ -2.36
BRD4O60885 RNU6-442P-201ENST00000383968 104 ntBASIC0.33□□□□□ -2.36
BRD4O60885 Y_RNA.456-201ENST00000384232 111 ntBASIC0.33□□□□□ -2.36
BRD4O60885 RNU1-119P-201ENST00000391122 165 ntBASIC0.33□□□□□ -2.36
BRD4O60885 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.33□□□□□ -2.36
BRD4O60885 AC005042.3-201ENST00000453230 174 ntBASIC0.33□□□□□ -2.36
BRD4O60885 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.33□□□□□ -2.36
BRD4O60885 RN7SKP164-201ENST00000516138 266 ntBASIC0.33□□□□□ -2.36
BRD4O60885 RNU6-559P-201ENST00000516151 98 ntBASIC0.33□□□□□ -2.36
BRD4O60885 RNU6-758P-201ENST00000516292 89 ntBASIC0.33□□□□□ -2.36
BRD4O60885 MTND4LP26-201ENST00000518144 282 ntBASIC0.33□□□□□ -2.36
BRD4O60885 AC113139.1-201ENST00000605049 239 ntBASIC0.33□□□□□ -2.36
BRD4O60885 RNU6-94P-201ENST00000607728 107 ntBASIC0.33□□□□□ -2.36
BRD4O60885 AC022306.2-201ENST00000617563 647 ntBASIC0.33□□□□□ -2.36
BRD4O60885 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
BRD4O60885 AC090625.1-201ENST00000357130 210 ntBASIC0.32□□□□□ -2.36
BRD4O60885 Y_RNA.142-201ENST00000363491 102 ntBASIC0.32□□□□□ -2.36
BRD4O60885 Y_RNA.203-201ENST00000364106 102 ntBASIC0.32□□□□□ -2.36
BRD4O60885 RNU6-396P-201ENST00000365369 105 ntBASIC0.32□□□□□ -2.36
BRD4O60885 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
BRD4O60885 SNORA2B-201ENST00000384583 137 ntBASIC0.32□□□□□ -2.36
BRD4O60885 PDCL2P1-201ENST00000419302 352 ntBASIC0.32□□□□□ -2.36
BRD4O60885 AC096644.2-201ENST00000429278 159 ntBASIC0.32□□□□□ -2.36
BRD4O60885 AL392103.1-201ENST00000447000 198 ntBASIC0.32□□□□□ -2.36
BRD4O60885 MTCO3P10-201ENST00000455912 772 ntBASIC0.32□□□□□ -2.36
BRD4O60885 RPL23AP54-201ENST00000495129 419 ntBASIC0.32□□□□□ -2.36
BRD4O60885 RNU6-1007P-201ENST00000516586 107 ntBASIC0.32□□□□□ -2.36
BRD4O60885 AC011195.1-201ENST00000578177 177 ntBASIC0.32□□□□□ -2.36
BRD4O60885 MIR2681-201ENST00000581814 105 ntBASIC0.32□□□□□ -2.36
BRD4O60885 AC087685.1-201ENST00000587507 141 ntBASIC0.32□□□□□ -2.36
BRD4O60885 VN1R91P-201ENST00000594377 169 ntBASIC0.32□□□□□ -2.36
BRD4O60885 AC104695.3-201ENST00000604052 296 ntBASIC0.32□□□□□ -2.36
BRD4O60885 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.32□□□□□ -2.36
BRD4O60885 AL355073.2-201ENST00000612106 557 ntBASIC0.32□□□□□ -2.36
BRD4O60885 Y_RNA.310-201ENST00000365063 113 ntBASIC0.32□□□□□ -2.36
BRD4O60885 Y_RNA.370-201ENST00000365589 108 ntBASIC0.32□□□□□ -2.36
BRD4O60885 RNU6-708P-201ENST00000384217 107 ntBASIC0.32□□□□□ -2.36
BRD4O60885 RNU6-1237P-201ENST00000384777 107 ntBASIC0.32□□□□□ -2.36
BRD4O60885 SNORD105-201ENST00000386910 85 ntBASIC0.32□□□□□ -2.36
BRD4O60885 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.32□□□□□ -2.36
BRD4O60885 MIR2115-201ENST00000516657 100 ntBASIC0.32□□□□□ -2.36
BRD4O60885 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.32□□□□□ -2.36
BRD4O60885 AC006600.1-201ENST00000572529 153 ntBASIC0.32□□□□□ -2.36
BRD4O60885 AC012433.1-201ENST00000588916 398 ntBASIC0.32□□□□□ -2.36
BRD4O60885 AP003357.1-201ENST00000604497 148 ntBASIC0.32□□□□□ -2.36
BRD4O60885 Y_RNA.772-201ENST00000606692 102 ntBASIC0.32□□□□□ -2.36
BRD4O60885 AC092794.1-201ENST00000612734 582 ntBASIC0.32□□□□□ -2.36
BRD4O60885 uc_338.22-201ENST00000622722 187 ntBASIC0.32□□□□□ -2.36
BRD4O60885 AC139792.2-201ENST00000624218 587 ntBASIC0.32□□□□□ -2.36
BRD4O60885 U8.7-201ENST00000364940 136 ntBASIC0.31□□□□□ -2.36
BRD4O60885 Y_RNA.331-201ENST00000365267 102 ntBASIC0.31□□□□□ -2.36
BRD4O60885 Y_RNA.384-201ENST00000383909 102 ntBASIC0.31□□□□□ -2.36
BRD4O60885 Y_RNA.428-201ENST00000384078 102 ntBASIC0.31□□□□□ -2.36
BRD4O60885 Y_RNA.462-201ENST00000384268 102 ntBASIC0.31□□□□□ -2.36
BRD4O60885 U8.17-201ENST00000391292 132 ntBASIC0.31□□□□□ -2.36
BRD4O60885 RNA5SP222-201ENST00000411039 105 ntBASIC0.31□□□□□ -2.36
BRD4O60885 MTCO2P27-201ENST00000420740 428 ntBASIC0.31□□□□□ -2.36
BRD4O60885 RNU6-830P-201ENST00000516353 107 ntBASIC0.31□□□□□ -2.36
BRD4O60885 RNU6-966P-201ENST00000516479 104 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms