Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RNA5SP489-201ENST00000410986 109 ntBASIC1.89□□□□□ -2.11
PHGDHO43175 Y_RNA.622-201ENST00000411091 108 ntBASIC1.89□□□□□ -2.11
PHGDHO43175 SNRPGP8-201ENST00000454064 226 ntBASIC1.89□□□□□ -2.11
PHGDHO43175 snoU13.9-201ENST00000458927 103 ntBASIC1.89□□□□□ -2.11
PHGDHO43175 SUMO2P16-201ENST00000519475 264 ntBASIC1.89□□□□□ -2.11
PHGDHO43175 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.89□□□□□ -2.11
PHGDHO43175 DEFB122-202ENST00000569013 197 ntBASIC1.89□□□□□ -2.11
PHGDHO43175 MIR3945-201ENST00000581853 98 ntBASIC1.89□□□□□ -2.11
PHGDHO43175 AC008507.4-201ENST00000585464 127 ntBASIC1.89□□□□□ -2.11
PHGDHO43175 AC108706.1-201ENST00000611053 297 ntBASIC1.89□□□□□ -2.11
PHGDHO43175 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
PHGDHO43175 RNU6-833P-201ENST00000363486 107 ntBASIC1.88□□□□□ -2.11
PHGDHO43175 RNU6-103P-201ENST00000363686 107 ntBASIC1.88□□□□□ -2.11
PHGDHO43175 RNA5SP259-201ENST00000365541 109 ntBASIC1.88□□□□□ -2.11
PHGDHO43175 MIR513A1-201ENST00000385138 129 ntBASIC1.88□□□□□ -2.11
PHGDHO43175 RNU6-578P-201ENST00000390980 103 ntBASIC1.88□□□□□ -2.11
PHGDHO43175 SNORD72-201ENST00000390994 80 ntBASIC1.88□□□□□ -2.11
PHGDHO43175 PCNPP3-201ENST00000393579 471 ntBASIC1.88□□□□□ -2.11
PHGDHO43175 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.88□□□□□ -2.11
PHGDHO43175 HMGN2P32-201ENST00000444648 269 ntBASIC1.88□□□□□ -2.11
PHGDHO43175 AC005908.1-201ENST00000468701 347 ntBASIC1.88□□□□□ -2.11
PHGDHO43175 Y_RNA.797-201ENST00000515977 94 ntBASIC1.88□□□□□ -2.11
PHGDHO43175 RNU7-149P-201ENST00000516739 59 ntBASIC1.88□□□□□ -2.11
PHGDHO43175 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.88□□□□□ -2.11
PHGDHO43175 MIR8063-201ENST00000621930 81 ntBASIC1.88□□□□□ -2.11
PHGDHO43175 Y_RNA.121-201ENST00000363309 113 ntBASIC1.87□□□□□ -2.11
PHGDHO43175 Y_RNA.242-201ENST00000364473 110 ntBASIC1.87□□□□□ -2.11
PHGDHO43175 RNU6-442P-201ENST00000383968 104 ntBASIC1.87□□□□□ -2.11
PHGDHO43175 RNY3P5-201ENST00000384127 102 ntBASIC1.87□□□□□ -2.11
PHGDHO43175 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.87□□□□□ -2.11
PHGDHO43175 MIR3198-2-201ENST00000577868 80 ntBASIC1.87□□□□□ -2.11
PHGDHO43175 AC098479.1-201ENST00000609225 154 ntBASIC1.87□□□□□ -2.11
PHGDHO43175 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PHGDHO43175 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PHGDHO43175 Y_RNA.270-201ENST00000364693 104 ntBASIC1.86□□□□□ -2.11
PHGDHO43175 Y_RNA.336-201ENST00000365307 109 ntBASIC1.86□□□□□ -2.11
PHGDHO43175 RNU6-886P-201ENST00000384319 105 ntBASIC1.86□□□□□ -2.11
PHGDHO43175 RNU6-1228P-201ENST00000391014 107 ntBASIC1.86□□□□□ -2.11
PHGDHO43175 AL121914.1-201ENST00000450188 156 ntBASIC1.86□□□□□ -2.11
PHGDHO43175 HSPE1P24-201ENST00000450782 238 ntBASIC1.86□□□□□ -2.11
PHGDHO43175 SNORD77.4-201ENST00000516158 81 ntBASIC1.86□□□□□ -2.11
PHGDHO43175 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.86□□□□□ -2.11
PHGDHO43175 AC109810.1-201ENST00000534066 224 ntBASIC1.86□□□□□ -2.11
PHGDHO43175 MRPS18CP4-201ENST00000535821 231 ntBASIC1.86□□□□□ -2.11
PHGDHO43175 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.86□□□□□ -2.11
PHGDHO43175 AC012493.3-201ENST00000604494 112 ntBASIC1.86□□□□□ -2.11
PHGDHO43175 Pinc.1-201ENST00000616452 154 ntBASIC1.86□□□□□ -2.11
PHGDHO43175 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.86□□□□□ -2.11
PHGDHO43175 AC106754.2-201ENST00000623006 233 ntBASIC1.86□□□□□ -2.11
PHGDHO43175 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
PHGDHO43175 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
PHGDHO43175 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
PHGDHO43175 RNU6-199P-201ENST00000362954 107 ntBASIC1.85□□□□□ -2.11
PHGDHO43175 SNORA16.1-201ENST00000364597 132 ntBASIC1.85□□□□□ -2.11
PHGDHO43175 RNU6-1138P-201ENST00000365359 106 ntBASIC1.85□□□□□ -2.11
PHGDHO43175 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
PHGDHO43175 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.85□□□□□ -2.11
PHGDHO43175 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.85□□□□□ -2.11
PHGDHO43175 MIR4662B-201ENST00000579498 81 ntBASIC1.85□□□□□ -2.11
PHGDHO43175 Y_RNA.75-201ENST00000362927 97 ntBASIC1.84□□□□□ -2.11
PHGDHO43175 Y_RNA.240-201ENST00000364469 95 ntBASIC1.84□□□□□ -2.11
PHGDHO43175 RNU6-275P-201ENST00000364910 107 ntBASIC1.84□□□□□ -2.11
PHGDHO43175 RNU6-728P-201ENST00000365375 104 ntBASIC1.84□□□□□ -2.11
PHGDHO43175 Y_RNA.486-201ENST00000384398 107 ntBASIC1.84□□□□□ -2.11
PHGDHO43175 MIR548I3-201ENST00000408378 149 ntBASIC1.84□□□□□ -2.11
PHGDHO43175 MIR548I1-201ENST00000408810 149 ntBASIC1.84□□□□□ -2.11
PHGDHO43175 AC003989.2-201ENST00000440224 169 ntBASIC1.84□□□□□ -2.11
PHGDHO43175 AC008834.1-201ENST00000511612 175 ntBASIC1.84□□□□□ -2.11
PHGDHO43175 Y_RNA.662-201ENST00000516028 97 ntBASIC1.84□□□□□ -2.11
PHGDHO43175 RNU1-41P-201ENST00000516161 162 ntBASIC1.84□□□□□ -2.11
PHGDHO43175 RNU1-48P-201ENST00000516400 162 ntBASIC1.84□□□□□ -2.11
PHGDHO43175 AC015688.6-201ENST00000577737 104 ntBASIC1.84□□□□□ -2.11
PHGDHO43175 SNORD45.3-201ENST00000363836 72 ntBASIC1.83□□□□□ -2.12
PHGDHO43175 RNU6-457P-201ENST00000363999 107 ntBASIC1.83□□□□□ -2.12
PHGDHO43175 RNU6-209P-201ENST00000384118 107 ntBASIC1.83□□□□□ -2.12
PHGDHO43175 RNU5E-9P-201ENST00000411164 104 ntBASIC1.83□□□□□ -2.12
PHGDHO43175 SEPT7P4-201ENST00000437076 306 ntBASIC1.83□□□□□ -2.12
PHGDHO43175 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.83□□□□□ -2.12
PHGDHO43175 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
PHGDHO43175 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
PHGDHO43175 ZNF355P-201ENST00000427301 3216 ntBASIC1.83□□□□□ -2.12
PHGDHO43175 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.82□□□□□ -2.12
PHGDHO43175 RNU6-484P-201ENST00000384016 107 ntBASIC1.82□□□□□ -2.12
PHGDHO43175 MIR452-201ENST00000385020 85 ntBASIC1.82□□□□□ -2.12
PHGDHO43175 MIR15B-201ENST00000385045 98 ntBASIC1.82□□□□□ -2.12
PHGDHO43175 RNU6-1299P-201ENST00000516316 100 ntBASIC1.82□□□□□ -2.12
PHGDHO43175 RNU6-126P-201ENST00000516685 103 ntBASIC1.82□□□□□ -2.12
PHGDHO43175 Y_RNA.91-201ENST00000363042 107 ntBASIC1.81□□□□□ -2.12
PHGDHO43175 Y_RNA.432-201ENST00000384087 111 ntBASIC1.81□□□□□ -2.12
PHGDHO43175 Y_RNA.555-201ENST00000384673 110 ntBASIC1.81□□□□□ -2.12
PHGDHO43175 MIR516B2-201ENST00000385190 85 ntBASIC1.81□□□□□ -2.12
PHGDHO43175 AC019129.1-201ENST00000403786 261 ntBASIC1.81□□□□□ -2.12
PHGDHO43175 RNU2-55P-201ENST00000411146 174 ntBASIC1.81□□□□□ -2.12
PHGDHO43175 MIR3122-201ENST00000577243 73 ntBASIC1.81□□□□□ -2.12
PHGDHO43175 MIR4419B-201ENST00000577260 68 ntBASIC1.81□□□□□ -2.12
PHGDHO43175 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.81□□□□□ -2.12
PHGDHO43175 AC104465.1-201ENST00000611365 139 ntBASIC1.81□□□□□ -2.12
PHGDHO43175 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
PHGDHO43175 SNORD1A-201ENST00000364968 72 ntBASIC1.8□□□□□ -2.12
PHGDHO43175 SNORD38C-201ENST00000384381 69 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms