Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RNU6-647P-201ENST00000364243 107 ntBASIC2.43□□□□□ -2.02
FOXN1O15353 MIR548A1-201ENST00000385041 97 ntBASIC2.43□□□□□ -2.02
FOXN1O15353 U6atac.2-201ENST00000408644 118 ntBASIC2.43□□□□□ -2.02
FOXN1O15353 RPL30P4-201ENST00000429309 333 ntBASIC2.43□□□□□ -2.02
FOXN1O15353 AC245102.2-201ENST00000448956 180 ntBASIC2.43□□□□□ -2.02
FOXN1O15353 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.43□□□□□ -2.02
FOXN1O15353 SNORD11-201ENST00000459124 84 ntBASIC2.43□□□□□ -2.02
FOXN1O15353 Y_RNA.651-201ENST00000459380 103 ntBASIC2.43□□□□□ -2.02
FOXN1O15353 RPS27P22-201ENST00000478056 241 ntBASIC2.43□□□□□ -2.02
FOXN1O15353 SCARNA3-201ENST00000517097 143 ntBASIC2.43□□□□□ -2.02
FOXN1O15353 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.43□□□□□ -2.02
FOXN1O15353 MIR3683-201ENST00000580847 82 ntBASIC2.43□□□□□ -2.02
FOXN1O15353 MIR3117-201ENST00000584034 78 ntBASIC2.43□□□□□ -2.02
FOXN1O15353 AL049779.4-201ENST00000604500 156 ntBASIC2.43□□□□□ -2.02
FOXN1O15353 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
FOXN1O15353 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
FOXN1O15353 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
FOXN1O15353 RNU6-1209P-201ENST00000363655 107 ntBASIC2.42□□□□□ -2.02
FOXN1O15353 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.42□□□□□ -2.02
FOXN1O15353 RPS4XP11-201ENST00000446897 772 ntBASIC2.42□□□□□ -2.02
FOXN1O15353 RN7SKP19-201ENST00000516016 252 ntBASIC2.42□□□□□ -2.02
FOXN1O15353 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.42□□□□□ -2.02
FOXN1O15353 SNORA25.15-201ENST00000516487 89 ntBASIC2.42□□□□□ -2.02
FOXN1O15353 AC091178.2-201ENST00000584401 117 ntBASIC2.42□□□□□ -2.02
FOXN1O15353 AC097639.2-201ENST00000603159 172 ntBASIC2.42□□□□□ -2.02
FOXN1O15353 Pinc.1-201ENST00000616452 154 ntBASIC2.42□□□□□ -2.02
FOXN1O15353 AC006435.5-201ENST00000624486 112 ntBASIC2.42□□□□□ -2.02
FOXN1O15353 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.42□□□□□ -2.02
FOXN1O15353 AP000553.5-201ENST00000641933 54 ntBASIC2.42□□□□□ -2.02
FOXN1O15353 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
FOXN1O15353 MIR450A1-201ENST00000362262 91 ntBASIC2.41□□□□□ -2.02
FOXN1O15353 Y_RNA.52-201ENST00000362760 96 ntBASIC2.41□□□□□ -2.02
FOXN1O15353 RNU1-72P-201ENST00000362976 153 ntBASIC2.41□□□□□ -2.02
FOXN1O15353 RNU1-22P-201ENST00000363334 158 ntBASIC2.41□□□□□ -2.02
FOXN1O15353 RNA5SP160-201ENST00000364866 120 ntBASIC2.41□□□□□ -2.02
FOXN1O15353 RNU6-1240P-201ENST00000365155 104 ntBASIC2.41□□□□□ -2.02
FOXN1O15353 Y_RNA.327-201ENST00000365201 102 ntBASIC2.41□□□□□ -2.02
FOXN1O15353 MIRLET7F2-201ENST00000385277 83 ntBASIC2.41□□□□□ -2.02
FOXN1O15353 RNA5SP338-201ENST00000410495 85 ntBASIC2.41□□□□□ -2.02
FOXN1O15353 Y_RNA.649-201ENST00000459077 103 ntBASIC2.41□□□□□ -2.02
FOXN1O15353 RNU7-149P-201ENST00000516739 59 ntBASIC2.41□□□□□ -2.02
FOXN1O15353 MIR2681-201ENST00000581814 105 ntBASIC2.41□□□□□ -2.02
FOXN1O15353 AC105245.1-201ENST00000581934 244 ntBASIC2.41□□□□□ -2.02
FOXN1O15353 AL022345.2-201ENST00000606307 135 ntBASIC2.41□□□□□ -2.02
FOXN1O15353 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
FOXN1O15353 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
FOXN1O15353 RNU6-392P-201ENST00000364926 101 ntBASIC2.4□□□□□ -2.03
FOXN1O15353 Y_RNA.486-201ENST00000384398 107 ntBASIC2.4□□□□□ -2.03
FOXN1O15353 RNU6-1235P-201ENST00000384559 107 ntBASIC2.4□□□□□ -2.03
FOXN1O15353 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
FOXN1O15353 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
FOXN1O15353 AL445685.2-201ENST00000422551 342 ntBASIC2.4□□□□□ -2.03
FOXN1O15353 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.4□□□□□ -2.03
FOXN1O15353 AC023449.1-201ENST00000454464 154 ntBASIC2.4□□□□□ -2.03
FOXN1O15353 RNU6-498P-201ENST00000459468 107 ntBASIC2.4□□□□□ -2.03
FOXN1O15353 SNORA18.4-201ENST00000516440 124 ntBASIC2.4□□□□□ -2.03
FOXN1O15353 RNU6-965P-201ENST00000516721 96 ntBASIC2.4□□□□□ -2.03
FOXN1O15353 IGKV1-22-201ENST00000524313 326 ntBASIC2.4□□□□□ -2.03
FOXN1O15353 AC011604.1-201ENST00000545978 196 ntBASIC2.4□□□□□ -2.03
FOXN1O15353 MIR5582-201ENST00000579697 68 ntBASIC2.4□□□□□ -2.03
FOXN1O15353 AC025166.1-201ENST00000612411 163 ntBASIC2.4□□□□□ -2.03
FOXN1O15353 Y_RNA.783-201ENST00000613546 102 ntBASIC2.4□□□□□ -2.03
FOXN1O15353 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.4□□□□□ -2.03
FOXN1O15353 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.4□□□□□ -2.03
FOXN1O15353 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
FOXN1O15353 RNU6-438P-201ENST00000365561 103 ntBASIC2.39□□□□□ -2.03
FOXN1O15353 Y_RNA.495-201ENST00000384435 112 ntBASIC2.39□□□□□ -2.03
FOXN1O15353 RNU6-880P-201ENST00000384526 107 ntBASIC2.39□□□□□ -2.03
FOXN1O15353 MIR562-201ENST00000384894 95 ntBASIC2.39□□□□□ -2.03
FOXN1O15353 MIR891A-201ENST00000401237 79 ntBASIC2.39□□□□□ -2.03
FOXN1O15353 AC008134.1-201ENST00000420943 193 ntBASIC2.39□□□□□ -2.03
FOXN1O15353 MTCO1P44-201ENST00000441935 243 ntBASIC2.39□□□□□ -2.03
FOXN1O15353 HMGN2P18-201ENST00000450680 270 ntBASIC2.39□□□□□ -2.03
FOXN1O15353 RNU7-95P-201ENST00000459222 64 ntBASIC2.39□□□□□ -2.03
FOXN1O15353 RNU7-172P-201ENST00000517125 64 ntBASIC2.39□□□□□ -2.03
FOXN1O15353 RNU1-104P-201ENST00000517280 175 ntBASIC2.39□□□□□ -2.03
FOXN1O15353 PVT1_3.1-201ENST00000620853 95 ntBASIC2.39□□□□□ -2.03
FOXN1O15353 MIR1248-201ENST00000629190 106 ntBASIC2.39□□□□□ -2.03
FOXN1O15353 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.39□□□□□ -2.03
FOXN1O15353 MTND5P18-201ENST00000445624 1801 ntBASIC2.39□□□□□ -2.03
FOXN1O15353 Y_RNA.66-201ENST00000362862 102 ntBASIC2.38□□□□□ -2.03
FOXN1O15353 Y_RNA.346-201ENST00000365385 112 ntBASIC2.38□□□□□ -2.03
FOXN1O15353 MIR624-201ENST00000385217 97 ntBASIC2.38□□□□□ -2.03
FOXN1O15353 RNU6-220P-201ENST00000390919 107 ntBASIC2.38□□□□□ -2.03
FOXN1O15353 FO393413.1-201ENST00000402892 195 ntBASIC2.38□□□□□ -2.03
FOXN1O15353 RNA5SP127-201ENST00000411051 133 ntBASIC2.38□□□□□ -2.03
FOXN1O15353 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.38□□□□□ -2.03
FOXN1O15353 OR9P1P-201ENST00000496431 281 ntBASIC2.38□□□□□ -2.03
FOXN1O15353 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.38□□□□□ -2.03
FOXN1O15353 AC097462.1-201ENST00000514125 324 ntBASIC2.38□□□□□ -2.03
FOXN1O15353 Y_RNA.694-201ENST00000516677 117 ntBASIC2.38□□□□□ -2.03
FOXN1O15353 RNU6-586P-201ENST00000517265 104 ntBASIC2.38□□□□□ -2.03
FOXN1O15353 AC007751.1-201ENST00000529260 376 ntBASIC2.38□□□□□ -2.03
FOXN1O15353 MIR4438-201ENST00000585271 93 ntBASIC2.38□□□□□ -2.03
FOXN1O15353 MIR6895-201ENST00000613497 78 ntBASIC2.38□□□□□ -2.03
FOXN1O15353 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.38□□□□□ -2.03
FOXN1O15353 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
FOXN1O15353 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
FOXN1O15353 Y_RNA.36-201ENST00000362602 112 ntBASIC2.37□□□□□ -2.03
FOXN1O15353 RNU6-1138P-201ENST00000365359 106 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms