Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 RNA5SP168-201ENST00000516642 112 ntBASIC3.53□□□□□ -1.84
RCCD1A6NED2 MIR6075-201ENST00000620782 95 ntBASIC3.53□□□□□ -1.84
RCCD1A6NED2 MIR6717-201ENST00000622747 73 ntBASIC3.53□□□□□ -1.84
RCCD1A6NED2 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
RCCD1A6NED2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RCCD1A6NED2 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
RCCD1A6NED2 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RCCD1A6NED2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RCCD1A6NED2 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RCCD1A6NED2 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RCCD1A6NED2 MIR449B-201ENST00000384995 97 ntBASIC3.52□□□□□ -1.85
RCCD1A6NED2 Y_RNA.611-201ENST00000410682 108 ntBASIC3.52□□□□□ -1.85
RCCD1A6NED2 AC104332.2-201ENST00000429959 156 ntBASIC3.52□□□□□ -1.85
RCCD1A6NED2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.52□□□□□ -1.85
RCCD1A6NED2 RN7SL601P-201ENST00000471221 293 ntBASIC3.52□□□□□ -1.85
RCCD1A6NED2 RNU1-95P-201ENST00000516357 160 ntBASIC3.52□□□□□ -1.85
RCCD1A6NED2 RNU1-128P-201ENST00000516704 160 ntBASIC3.52□□□□□ -1.85
RCCD1A6NED2 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.52□□□□□ -1.85
RCCD1A6NED2 MIR4444-1-201ENST00000581696 74 ntBASIC3.52□□□□□ -1.85
RCCD1A6NED2 MIR4444-2-201ENST00000584390 74 ntBASIC3.52□□□□□ -1.85
RCCD1A6NED2 SNORA51-201ENST00000606420 132 ntBASIC3.52□□□□□ -1.85
RCCD1A6NED2 MIR376B-201ENST00000614515 100 ntBASIC3.52□□□□□ -1.85
RCCD1A6NED2 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.52□□□□□ -1.85
RCCD1A6NED2 U6.98-201ENST00000637157 84 ntBASIC3.52□□□□□ -1.85
RCCD1A6NED2 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RCCD1A6NED2 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.51□□□□□ -1.85
RCCD1A6NED2 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RCCD1A6NED2 SNORA32-201ENST00000384072 121 ntBASIC3.51□□□□□ -1.85
RCCD1A6NED2 SNORA5A-201ENST00000384111 134 ntBASIC3.51□□□□□ -1.85
RCCD1A6NED2 RN7SKP111-201ENST00000410349 271 ntBASIC3.51□□□□□ -1.85
RCCD1A6NED2 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.51□□□□□ -1.85
RCCD1A6NED2 AC090844.1-201ENST00000422019 156 ntBASIC3.51□□□□□ -1.85
RCCD1A6NED2 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.51□□□□□ -1.85
RCCD1A6NED2 ELOCP29-201ENST00000588193 334 ntBASIC3.51□□□□□ -1.85
RCCD1A6NED2 uc_338.1-201ENST00000612113 180 ntBASIC3.51□□□□□ -1.85
RCCD1A6NED2 AL449363.1-201ENST00000617815 186 ntBASIC3.51□□□□□ -1.85
RCCD1A6NED2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.51□□□□□ -1.85
RCCD1A6NED2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
RCCD1A6NED2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RCCD1A6NED2 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
RCCD1A6NED2 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RCCD1A6NED2 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RCCD1A6NED2 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.51□□□□□ -1.85
RCCD1A6NED2 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RCCD1A6NED2 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
RCCD1A6NED2 Y_RNA.4-201ENST00000362333 112 ntBASIC3.5□□□□□ -1.85
RCCD1A6NED2 SNORA24-201ENST00000384096 131 ntBASIC3.5□□□□□ -1.85
RCCD1A6NED2 MIR516B2-201ENST00000385190 85 ntBASIC3.5□□□□□ -1.85
RCCD1A6NED2 MIR136-201ENST00000385207 82 ntBASIC3.5□□□□□ -1.85
RCCD1A6NED2 RNA5SP171-201ENST00000391071 115 ntBASIC3.5□□□□□ -1.85
RCCD1A6NED2 CST9LP2-201ENST00000437612 320 ntBASIC3.5□□□□□ -1.85
RCCD1A6NED2 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.5□□□□□ -1.85
RCCD1A6NED2 HSPE1P9-201ENST00000440046 311 ntBASIC3.5□□□□□ -1.85
RCCD1A6NED2 AC026403.1-201ENST00000518938 295 ntBASIC3.5□□□□□ -1.85
RCCD1A6NED2 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.5□□□□□ -1.85
RCCD1A6NED2 U3.45-201ENST00000607547 219 ntBASIC3.5□□□□□ -1.85
RCCD1A6NED2 MIR4791-201ENST00000607666 84 ntBASIC3.5□□□□□ -1.85
RCCD1A6NED2 SNORD3E-202ENST00000627253 216 ntBASIC3.5□□□□□ -1.85
RCCD1A6NED2 AC006160.2-201ENST00000637708 154 ntBASIC3.5□□□□□ -1.85
RCCD1A6NED2 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.5□□□□□ -1.85
RCCD1A6NED2 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RCCD1A6NED2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RCCD1A6NED2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RCCD1A6NED2 SNORD115-3-201ENST00000363100 82 ntBASIC3.49□□□□□ -1.85
RCCD1A6NED2 RNU7-73P-201ENST00000458743 63 ntBASIC3.49□□□□□ -1.85
RCCD1A6NED2 AC245166.1-201ENST00000521012 253 ntBASIC3.49□□□□□ -1.85
RCCD1A6NED2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.49□□□□□ -1.85
RCCD1A6NED2 AC009093.8-201ENST00000641769 292 ntBASIC3.49□□□□□ -1.85
RCCD1A6NED2 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.49□□□□□ -1.85
RCCD1A6NED2 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RCCD1A6NED2 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RCCD1A6NED2 AC093831.2-201ENST00000624393 3427 ntBASIC3.48□□□□□ -1.85
RCCD1A6NED2 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
RCCD1A6NED2 RNU1-58P-201ENST00000362413 163 ntBASIC3.48□□□□□ -1.85
RCCD1A6NED2 RNU6-509P-201ENST00000363519 107 ntBASIC3.48□□□□□ -1.85
RCCD1A6NED2 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.48□□□□□ -1.85
RCCD1A6NED2 MIR29C-201ENST00000385231 88 ntBASIC3.48□□□□□ -1.85
RCCD1A6NED2 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
RCCD1A6NED2 AC073261.1-201ENST00000429409 121 ntBASIC3.48□□□□□ -1.85
RCCD1A6NED2 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.48□□□□□ -1.85
RCCD1A6NED2 AL020996.3-201ENST00000606617 222 ntBASIC3.48□□□□□ -1.85
RCCD1A6NED2 AC103810.7-201ENST00000607821 91 ntBASIC3.48□□□□□ -1.85
RCCD1A6NED2 MIR548BB-201ENST00000626714 66 ntBASIC3.48□□□□□ -1.85
RCCD1A6NED2 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RCCD1A6NED2 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
RCCD1A6NED2 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RCCD1A6NED2 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
RCCD1A6NED2 MIR7-3-201ENST00000384898 110 ntBASIC3.47□□□□□ -1.85
RCCD1A6NED2 MIR1289-1-201ENST00000408836 144 ntBASIC3.47□□□□□ -1.85
RCCD1A6NED2 Y_RNA.607-201ENST00000410597 98 ntBASIC3.47□□□□□ -1.85
RCCD1A6NED2 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.47□□□□□ -1.85
RCCD1A6NED2 RN7SL75P-201ENST00000461926 281 ntBASIC3.47□□□□□ -1.85
RCCD1A6NED2 RNA5SP217-201ENST00000515959 91 ntBASIC3.47□□□□□ -1.85
RCCD1A6NED2 RNU7-2P-201ENST00000516096 62 ntBASIC3.47□□□□□ -1.85
RCCD1A6NED2 RNU6-86P-201ENST00000606534 107 ntBASIC3.47□□□□□ -1.85
RCCD1A6NED2 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
RCCD1A6NED2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RCCD1A6NED2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
RCCD1A6NED2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.85
RCCD1A6NED2 SNORA71.3-201ENST00000362582 128 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms