Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 MIR1267-201ENST00000408723 78 ntBASIC1.66□□□□□ -2.14
TCRBV7S3A2A0A539 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.66□□□□□ -2.14
TCRBV7S3A2A0A539 HMGN2P32-201ENST00000444648 269 ntBASIC1.66□□□□□ -2.14
TCRBV7S3A2A0A539 RNU7-120P-201ENST00000459334 63 ntBASIC1.66□□□□□ -2.14
TCRBV7S3A2A0A539 AC114811.1-201ENST00000507207 168 ntBASIC1.66□□□□□ -2.14
TCRBV7S3A2A0A539 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.66□□□□□ -2.14
TCRBV7S3A2A0A539 RNU6-126P-201ENST00000516685 103 ntBASIC1.66□□□□□ -2.14
TCRBV7S3A2A0A539 RNU7-149P-201ENST00000516739 59 ntBASIC1.66□□□□□ -2.14
TCRBV7S3A2A0A539 RNU6-1116P-201ENST00000517269 99 ntBASIC1.66□□□□□ -2.14
TCRBV7S3A2A0A539 MIR4662B-201ENST00000579498 81 ntBASIC1.66□□□□□ -2.14
TCRBV7S3A2A0A539 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
TCRBV7S3A2A0A539 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
TCRBV7S3A2A0A539 Y_RNA.75-201ENST00000362927 97 ntBASIC1.65□□□□□ -2.15
TCRBV7S3A2A0A539 Y_RNA.233-201ENST00000364407 101 ntBASIC1.65□□□□□ -2.15
TCRBV7S3A2A0A539 RNU6-163P-201ENST00000384396 106 ntBASIC1.65□□□□□ -2.15
TCRBV7S3A2A0A539 RNU4-70P-201ENST00000384579 139 ntBASIC1.65□□□□□ -2.15
TCRBV7S3A2A0A539 RNU6-578P-201ENST00000390980 103 ntBASIC1.65□□□□□ -2.15
TCRBV7S3A2A0A539 MIR891A-201ENST00000401237 79 ntBASIC1.65□□□□□ -2.15
TCRBV7S3A2A0A539 SNRPGP14-201ENST00000435400 219 ntBASIC1.65□□□□□ -2.15
TCRBV7S3A2A0A539 HMGN2P23-201ENST00000456759 269 ntBASIC1.65□□□□□ -2.15
TCRBV7S3A2A0A539 RNU7-12P-201ENST00000516030 62 ntBASIC1.65□□□□□ -2.15
TCRBV7S3A2A0A539 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.65□□□□□ -2.15
TCRBV7S3A2A0A539 AC015688.6-201ENST00000577737 104 ntBASIC1.65□□□□□ -2.15
TCRBV7S3A2A0A539 MIR3668-201ENST00000582138 75 ntBASIC1.65□□□□□ -2.15
TCRBV7S3A2A0A539 RNU2-4P-201ENST00000606190 192 ntBASIC1.65□□□□□ -2.15
TCRBV7S3A2A0A539 AC108706.1-201ENST00000611053 297 ntBASIC1.65□□□□□ -2.15
TCRBV7S3A2A0A539 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.65□□□□□ -2.15
TCRBV7S3A2A0A539 AC004792.1-201ENST00000614523 137 ntBASIC1.65□□□□□ -2.15
TCRBV7S3A2A0A539 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.65□□□□□ -2.15
TCRBV7S3A2A0A539 SNORD3E-202ENST00000627253 216 ntBASIC1.65□□□□□ -2.15
TCRBV7S3A2A0A539 RNU6-907P-201ENST00000390924 102 ntBASIC1.64□□□□□ -2.15
TCRBV7S3A2A0A539 RNU4-43P-201ENST00000410628 137 ntBASIC1.64□□□□□ -2.15
TCRBV7S3A2A0A539 PIGPP3-201ENST00000425307 415 ntBASIC1.64□□□□□ -2.15
TCRBV7S3A2A0A539 SNRPGP8-201ENST00000454064 226 ntBASIC1.64□□□□□ -2.15
TCRBV7S3A2A0A539 RNU6-182P-201ENST00000516970 105 ntBASIC1.64□□□□□ -2.15
TCRBV7S3A2A0A539 AP002392.1-201ENST00000537692 208 ntBASIC1.64□□□□□ -2.15
TCRBV7S3A2A0A539 AL160236.1-201ENST00000556317 195 ntBASIC1.64□□□□□ -2.15
TCRBV7S3A2A0A539 MIR3198-2-201ENST00000577868 80 ntBASIC1.64□□□□□ -2.15
TCRBV7S3A2A0A539 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
TCRBV7S3A2A0A539 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
TCRBV7S3A2A0A539 SNORD14E-201ENST00000364009 85 ntBASIC1.63□□□□□ -2.15
TCRBV7S3A2A0A539 RNU6-442P-201ENST00000383968 104 ntBASIC1.63□□□□□ -2.15
TCRBV7S3A2A0A539 RNU6-484P-201ENST00000384016 107 ntBASIC1.63□□□□□ -2.15
TCRBV7S3A2A0A539 SNORD72-201ENST00000390994 80 ntBASIC1.63□□□□□ -2.15
TCRBV7S3A2A0A539 AL627390.1-201ENST00000396055 340 ntBASIC1.63□□□□□ -2.15
TCRBV7S3A2A0A539 RNA5SP153-201ENST00000516498 76 ntBASIC1.63□□□□□ -2.15
TCRBV7S3A2A0A539 MIR514B-201ENST00000516774 80 ntBASIC1.63□□□□□ -2.15
TCRBV7S3A2A0A539 AC109810.1-201ENST00000534066 224 ntBASIC1.63□□□□□ -2.15
TCRBV7S3A2A0A539 MRPS18CP4-201ENST00000535821 231 ntBASIC1.63□□□□□ -2.15
TCRBV7S3A2A0A539 AC006441.5-201ENST00000612680 209 ntBASIC1.63□□□□□ -2.15
TCRBV7S3A2A0A539 Pinc.1-201ENST00000616452 154 ntBASIC1.63□□□□□ -2.15
TCRBV7S3A2A0A539 AL359851.1-201ENST00000569460 4997 ntBASIC1.63□□□□□ -2.15
TCRBV7S3A2A0A539 MIR302D-201ENST00000362275 68 ntBASIC1.62□□□□□ -2.15
TCRBV7S3A2A0A539 Y_RNA.182-201ENST00000363880 111 ntBASIC1.62□□□□□ -2.15
TCRBV7S3A2A0A539 RNU6-275P-201ENST00000364910 107 ntBASIC1.62□□□□□ -2.15
TCRBV7S3A2A0A539 RNU6-728P-201ENST00000365375 104 ntBASIC1.62□□□□□ -2.15
TCRBV7S3A2A0A539 MIR504-201ENST00000385065 83 ntBASIC1.62□□□□□ -2.15
TCRBV7S3A2A0A539 MIR676-201ENST00000390702 67 ntBASIC1.62□□□□□ -2.15
TCRBV7S3A2A0A539 MTND5P15-201ENST00000434246 349 ntBASIC1.62□□□□□ -2.15
TCRBV7S3A2A0A539 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.62□□□□□ -2.15
TCRBV7S3A2A0A539 Y_RNA.797-201ENST00000515977 94 ntBASIC1.62□□□□□ -2.15
TCRBV7S3A2A0A539 RNU6-1299P-201ENST00000516316 100 ntBASIC1.62□□□□□ -2.15
TCRBV7S3A2A0A539 AC097639.2-201ENST00000603159 172 ntBASIC1.62□□□□□ -2.15
TCRBV7S3A2A0A539 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.62□□□□□ -2.15
TCRBV7S3A2A0A539 SNORD45.3-201ENST00000363836 72 ntBASIC1.61□□□□□ -2.15
TCRBV7S3A2A0A539 RNU6-312P-201ENST00000364629 107 ntBASIC1.61□□□□□ -2.15
TCRBV7S3A2A0A539 Y_RNA.412-201ENST00000384001 104 ntBASIC1.61□□□□□ -2.15
TCRBV7S3A2A0A539 MIR513A1-201ENST00000385138 129 ntBASIC1.61□□□□□ -2.15
TCRBV7S3A2A0A539 CYCSP49-201ENST00000420810 319 ntBASIC1.61□□□□□ -2.15
TCRBV7S3A2A0A539 snoU13.9-201ENST00000458927 103 ntBASIC1.61□□□□□ -2.15
TCRBV7S3A2A0A539 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.61□□□□□ -2.15
TCRBV7S3A2A0A539 AC008834.1-201ENST00000511612 175 ntBASIC1.61□□□□□ -2.15
TCRBV7S3A2A0A539 RNU6-561P-201ENST00000516222 102 ntBASIC1.61□□□□□ -2.15
TCRBV7S3A2A0A539 AC022559.1-201ENST00000520905 205 ntBASIC1.61□□□□□ -2.15
TCRBV7S3A2A0A539 MIR4778-201ENST00000577635 80 ntBASIC1.61□□□□□ -2.15
TCRBV7S3A2A0A539 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.61□□□□□ -2.15
TCRBV7S3A2A0A539 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.61□□□□□ -2.15
TCRBV7S3A2A0A539 U6.106-201ENST00000636360 105 ntBASIC1.61□□□□□ -2.15
TCRBV7S3A2A0A539 Y_RNA.23-201ENST00000362496 106 ntBASIC1.6□□□□□ -2.15
TCRBV7S3A2A0A539 RNU6-199P-201ENST00000362954 107 ntBASIC1.6□□□□□ -2.15
TCRBV7S3A2A0A539 RNU6-682P-201ENST00000363843 106 ntBASIC1.6□□□□□ -2.15
TCRBV7S3A2A0A539 RNU6-268P-201ENST00000364174 107 ntBASIC1.6□□□□□ -2.15
TCRBV7S3A2A0A539 Y_RNA.240-201ENST00000364469 95 ntBASIC1.6□□□□□ -2.15
TCRBV7S3A2A0A539 Y_RNA.432-201ENST00000384087 111 ntBASIC1.6□□□□□ -2.15
TCRBV7S3A2A0A539 Y_RNA.486-201ENST00000384398 107 ntBASIC1.6□□□□□ -2.15
TCRBV7S3A2A0A539 MIR452-201ENST00000385020 85 ntBASIC1.6□□□□□ -2.15
TCRBV7S3A2A0A539 MIR653-201ENST00000385279 96 ntBASIC1.6□□□□□ -2.15
TCRBV7S3A2A0A539 SNORA26-201ENST00000391286 122 ntBASIC1.6□□□□□ -2.15
TCRBV7S3A2A0A539 AC093850.1-201ENST00000454121 251 ntBASIC1.6□□□□□ -2.15
TCRBV7S3A2A0A539 RNU6-1219P-201ENST00000516143 112 ntBASIC1.6□□□□□ -2.15
TCRBV7S3A2A0A539 RNU6-830P-201ENST00000516353 107 ntBASIC1.6□□□□□ -2.15
TCRBV7S3A2A0A539 SUMO2P16-201ENST00000519475 264 ntBASIC1.6□□□□□ -2.15
TCRBV7S3A2A0A539 FTX_2.1-201ENST00000618816 94 ntBASIC1.6□□□□□ -2.15
TCRBV7S3A2A0A539 RNU6-457P-201ENST00000363999 107 ntBASIC1.59□□□□□ -2.15
TCRBV7S3A2A0A539 MIR320A-201ENST00000385302 82 ntBASIC1.59□□□□□ -2.15
TCRBV7S3A2A0A539 MIR802-201ENST00000390235 94 ntBASIC1.59□□□□□ -2.15
TCRBV7S3A2A0A539 RN7SKP51-201ENST00000410781 304 ntBASIC1.59□□□□□ -2.15
TCRBV7S3A2A0A539 Y_RNA.622-201ENST00000411091 108 ntBASIC1.59□□□□□ -2.15
TCRBV7S3A2A0A539 AC015922.2-201ENST00000435593 184 ntBASIC1.59□□□□□ -2.15
TCRBV7S3A2A0A539 AL121914.1-201ENST00000450188 156 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms