Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 STAG3L5P-204ENST00000443759 179 ntBASIC2.07□□□□□ -2.08
PCDHA3Q9Y5H8 RNA5SP57-201ENST00000459463 123 ntBASIC2.07□□□□□ -2.08
PCDHA3Q9Y5H8 AC022559.1-201ENST00000520905 205 ntBASIC2.07□□□□□ -2.08
PCDHA3Q9Y5H8 MIR4648-201ENST00000580107 72 ntBASIC2.07□□□□□ -2.08
PCDHA3Q9Y5H8 MIR219B-201ENST00000637023 88 ntBASIC2.07□□□□□ -2.08
PCDHA3Q9Y5H8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.07□□□□□ -2.08
PCDHA3Q9Y5H8 SNORA67.3-201ENST00000384366 140 ntBASIC2.06□□□□□ -2.08
PCDHA3Q9Y5H8 RNU6-131P-201ENST00000391144 107 ntBASIC2.06□□□□□ -2.08
PCDHA3Q9Y5H8 AL606845.1-201ENST00000404881 255 ntBASIC2.06□□□□□ -2.08
PCDHA3Q9Y5H8 RPL30P13-201ENST00000418873 348 ntBASIC2.06□□□□□ -2.08
PCDHA3Q9Y5H8 AL445646.1-201ENST00000431784 216 ntBASIC2.06□□□□□ -2.08
PCDHA3Q9Y5H8 NDUFA4P2-201ENST00000489989 244 ntBASIC2.06□□□□□ -2.08
PCDHA3Q9Y5H8 Y_RNA.797-201ENST00000515977 94 ntBASIC2.06□□□□□ -2.08
PCDHA3Q9Y5H8 MIR4287-201ENST00000579398 78 ntBASIC2.06□□□□□ -2.08
PCDHA3Q9Y5H8 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
PCDHA3Q9Y5H8 SNORD68-201ENST00000363214 84 ntBASIC2.05□□□□□ -2.08
PCDHA3Q9Y5H8 RNU6-682P-201ENST00000363843 106 ntBASIC2.05□□□□□ -2.08
PCDHA3Q9Y5H8 Y_RNA.182-201ENST00000363880 111 ntBASIC2.05□□□□□ -2.08
PCDHA3Q9Y5H8 Y_RNA.240-201ENST00000364469 95 ntBASIC2.05□□□□□ -2.08
PCDHA3Q9Y5H8 Y_RNA.242-201ENST00000364473 110 ntBASIC2.05□□□□□ -2.08
PCDHA3Q9Y5H8 RNU6-275P-201ENST00000364910 107 ntBASIC2.05□□□□□ -2.08
PCDHA3Q9Y5H8 RNU6-1138P-201ENST00000365359 106 ntBASIC2.05□□□□□ -2.08
PCDHA3Q9Y5H8 Y_RNA.555-201ENST00000384673 110 ntBASIC2.05□□□□□ -2.08
PCDHA3Q9Y5H8 Y_RNA.587-201ENST00000391210 103 ntBASIC2.05□□□□□ -2.08
PCDHA3Q9Y5H8 AL356379.1-201ENST00000414105 126 ntBASIC2.05□□□□□ -2.08
PCDHA3Q9Y5H8 SNORD77.4-201ENST00000516158 81 ntBASIC2.05□□□□□ -2.08
PCDHA3Q9Y5H8 MRPS18CP4-201ENST00000535821 231 ntBASIC2.05□□□□□ -2.08
PCDHA3Q9Y5H8 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.05□□□□□ -2.08
PCDHA3Q9Y5H8 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.05□□□□□ -2.08
PCDHA3Q9Y5H8 AL049861.1-201ENST00000603130 150 ntBASIC2.05□□□□□ -2.08
PCDHA3Q9Y5H8 SNRPGP19-201ENST00000603826 189 ntBASIC2.05□□□□□ -2.08
PCDHA3Q9Y5H8 AC108706.1-201ENST00000611053 297 ntBASIC2.05□□□□□ -2.08
PCDHA3Q9Y5H8 MIRLET7C-201ENST00000362160 84 ntBASIC2.04□□□□□ -2.08
PCDHA3Q9Y5H8 RNU6-312P-201ENST00000364629 107 ntBASIC2.04□□□□□ -2.08
PCDHA3Q9Y5H8 RNA5SP489-201ENST00000410986 109 ntBASIC2.04□□□□□ -2.08
PCDHA3Q9Y5H8 MLLT10P1-201ENST00000418346 262 ntBASIC2.04□□□□□ -2.08
PCDHA3Q9Y5H8 RPL23AP6-201ENST00000446637 472 ntBASIC2.04□□□□□ -2.08
PCDHA3Q9Y5H8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
PCDHA3Q9Y5H8 RNU6-1219P-201ENST00000516143 112 ntBASIC2.04□□□□□ -2.08
PCDHA3Q9Y5H8 RNU6-126P-201ENST00000516685 103 ntBASIC2.04□□□□□ -2.08
PCDHA3Q9Y5H8 RNU6-861P-201ENST00000516745 106 ntBASIC2.04□□□□□ -2.08
PCDHA3Q9Y5H8 AC109810.1-201ENST00000534066 224 ntBASIC2.04□□□□□ -2.08
PCDHA3Q9Y5H8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
PCDHA3Q9Y5H8 Y_RNA.23-201ENST00000362496 106 ntBASIC2.03□□□□□ -2.08
PCDHA3Q9Y5H8 RNU6-728P-201ENST00000365375 104 ntBASIC2.03□□□□□ -2.08
PCDHA3Q9Y5H8 Y_RNA.412-201ENST00000384001 104 ntBASIC2.03□□□□□ -2.08
PCDHA3Q9Y5H8 MT-TR-201ENST00000387439 65 ntBASIC2.03□□□□□ -2.08
PCDHA3Q9Y5H8 RNU2-40P-201ENST00000410833 196 ntBASIC2.03□□□□□ -2.08
PCDHA3Q9Y5H8 SNRPGP8-201ENST00000454064 226 ntBASIC2.03□□□□□ -2.08
PCDHA3Q9Y5H8 RNA5SP233-201ENST00000459153 113 ntBASIC2.03□□□□□ -2.08
PCDHA3Q9Y5H8 AC099513.1-201ENST00000490423 301 ntBASIC2.03□□□□□ -2.08
PCDHA3Q9Y5H8 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.03□□□□□ -2.08
PCDHA3Q9Y5H8 Y_RNA.662-201ENST00000516028 97 ntBASIC2.03□□□□□ -2.08
PCDHA3Q9Y5H8 RNU7-149P-201ENST00000516739 59 ntBASIC2.03□□□□□ -2.08
PCDHA3Q9Y5H8 RNA5SP364-201ENST00000516938 78 ntBASIC2.03□□□□□ -2.08
PCDHA3Q9Y5H8 MIR4299-201ENST00000577899 72 ntBASIC2.03□□□□□ -2.08
PCDHA3Q9Y5H8 MIR4662B-201ENST00000579498 81 ntBASIC2.03□□□□□ -2.08
PCDHA3Q9Y5H8 MIR4713-201ENST00000582691 75 ntBASIC2.03□□□□□ -2.08
PCDHA3Q9Y5H8 AC008507.4-201ENST00000585464 127 ntBASIC2.03□□□□□ -2.08
PCDHA3Q9Y5H8 AC104984.5-201ENST00000586878 94 ntBASIC2.03□□□□□ -2.08
PCDHA3Q9Y5H8 AC021506.2-201ENST00000612354 169 ntBASIC2.03□□□□□ -2.08
PCDHA3Q9Y5H8 AC027279.3-201ENST00000625055 122 ntBASIC2.03□□□□□ -2.08
PCDHA3Q9Y5H8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.03□□□□□ -2.08
PCDHA3Q9Y5H8 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.03□□□□□ -2.08
PCDHA3Q9Y5H8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
PCDHA3Q9Y5H8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
PCDHA3Q9Y5H8 Y_RNA.270-201ENST00000364693 104 ntBASIC2.02□□□□□ -2.09
PCDHA3Q9Y5H8 RNU6-886P-201ENST00000384319 105 ntBASIC2.02□□□□□ -2.09
PCDHA3Q9Y5H8 RNU6-424P-201ENST00000384367 105 ntBASIC2.02□□□□□ -2.09
PCDHA3Q9Y5H8 MIR548I3-201ENST00000408378 149 ntBASIC2.02□□□□□ -2.09
PCDHA3Q9Y5H8 MIR548I1-201ENST00000408810 149 ntBASIC2.02□□□□□ -2.09
PCDHA3Q9Y5H8 RNU4-43P-201ENST00000410628 137 ntBASIC2.02□□□□□ -2.09
PCDHA3Q9Y5H8 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.02□□□□□ -2.09
PCDHA3Q9Y5H8 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.02□□□□□ -2.09
PCDHA3Q9Y5H8 RNU7-34P-201ENST00000459394 64 ntBASIC2.02□□□□□ -2.09
PCDHA3Q9Y5H8 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.02□□□□□ -2.09
PCDHA3Q9Y5H8 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.02□□□□□ -2.09
PCDHA3Q9Y5H8 MIR6715A-201ENST00000615929 79 ntBASIC2.02□□□□□ -2.09
PCDHA3Q9Y5H8 AL513423.1-201ENST00000621695 132 ntBASIC2.02□□□□□ -2.09
PCDHA3Q9Y5H8 ZNF355P-201ENST00000427301 3216 ntBASIC2.01□□□□□ -2.09
PCDHA3Q9Y5H8 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
PCDHA3Q9Y5H8 RNU6-661P-201ENST00000362409 107 ntBASIC2.01□□□□□ -2.09
PCDHA3Q9Y5H8 SNORD50B-201ENST00000364995 70 ntBASIC2.01□□□□□ -2.09
PCDHA3Q9Y5H8 snoU13.26-201ENST00000459452 105 ntBASIC2.01□□□□□ -2.09
PCDHA3Q9Y5H8 RN7SL274P-201ENST00000492268 272 ntBASIC2.01□□□□□ -2.09
PCDHA3Q9Y5H8 CYCTP-201ENST00000504253 315 ntBASIC2.01□□□□□ -2.09
PCDHA3Q9Y5H8 RNA5SP168-201ENST00000516642 112 ntBASIC2.01□□□□□ -2.09
PCDHA3Q9Y5H8 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.01□□□□□ -2.09
PCDHA3Q9Y5H8 AL160236.1-201ENST00000556317 195 ntBASIC2.01□□□□□ -2.09
PCDHA3Q9Y5H8 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.01□□□□□ -2.09
PCDHA3Q9Y5H8 uc_338.20-201ENST00000621563 178 ntBASIC2.01□□□□□ -2.09
PCDHA3Q9Y5H8 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2□□□□□ -2.09
PCDHA3Q9Y5H8 RNU6-1084P-201ENST00000362498 107 ntBASIC2□□□□□ -2.09
PCDHA3Q9Y5H8 Y_RNA.180-201ENST00000363867 113 ntBASIC2□□□□□ -2.09
PCDHA3Q9Y5H8 snoU2-30.1-201ENST00000365012 70 ntBASIC2□□□□□ -2.09
PCDHA3Q9Y5H8 RNU6-484P-201ENST00000384016 107 ntBASIC2□□□□□ -2.09
PCDHA3Q9Y5H8 U8.16-201ENST00000391279 133 ntBASIC2□□□□□ -2.09
PCDHA3Q9Y5H8 PCNPP3-201ENST00000393579 471 ntBASIC2□□□□□ -2.09
PCDHA3Q9Y5H8 HMGN2P19-201ENST00000425149 265 ntBASIC2□□□□□ -2.09
PCDHA3Q9Y5H8 CALM2P4-201ENST00000430810 426 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms