Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RNU6-998P-201ENST00000515894 101 ntBASIC3.08□□□□□ -1.92
PCDHGA11Q9Y5H2 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.08□□□□□ -1.92
PCDHGA11Q9Y5H2 MIR2682-201ENST00000580305 110 ntBASIC3.08□□□□□ -1.92
PCDHGA11Q9Y5H2 AC002984.1-201ENST00000591692 448 ntBASIC3.08□□□□□ -1.92
PCDHGA11Q9Y5H2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.08□□□□□ -1.92
PCDHGA11Q9Y5H2 MIR2052-201ENST00000636055 55 ntBASIC3.08□□□□□ -1.92
PCDHGA11Q9Y5H2 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHGA11Q9Y5H2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
PCDHGA11Q9Y5H2 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHGA11Q9Y5H2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHGA11Q9Y5H2 MIR1912-201ENST00000410389 80 ntBASIC3.07□□□□□ -1.92
PCDHGA11Q9Y5H2 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.07□□□□□ -1.92
PCDHGA11Q9Y5H2 RNU6-893P-201ENST00000458841 100 ntBASIC3.07□□□□□ -1.92
PCDHGA11Q9Y5H2 RNU7-26P-201ENST00000458980 63 ntBASIC3.07□□□□□ -1.92
PCDHGA11Q9Y5H2 RNU7-12P-201ENST00000516030 62 ntBASIC3.07□□□□□ -1.92
PCDHGA11Q9Y5H2 RNU2-35P-201ENST00000516446 142 ntBASIC3.07□□□□□ -1.92
PCDHGA11Q9Y5H2 RNU7-6P-201ENST00000516845 62 ntBASIC3.07□□□□□ -1.92
PCDHGA11Q9Y5H2 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.07□□□□□ -1.92
PCDHGA11Q9Y5H2 AC074050.1-201ENST00000563247 211 ntBASIC3.07□□□□□ -1.92
PCDHGA11Q9Y5H2 AC008739.3-201ENST00000603262 127 ntBASIC3.07□□□□□ -1.92
PCDHGA11Q9Y5H2 AL162726.3-218ENST00000636401 95 ntBASIC3.07□□□□□ -1.92
PCDHGA11Q9Y5H2 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.07□□□□□ -1.92
PCDHGA11Q9Y5H2 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHGA11Q9Y5H2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
PCDHGA11Q9Y5H2 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PCDHGA11Q9Y5H2 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
PCDHGA11Q9Y5H2 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
PCDHGA11Q9Y5H2 RNU4-16P-201ENST00000364737 141 ntBASIC3.06□□□□□ -1.92
PCDHGA11Q9Y5H2 RNU6-294P-201ENST00000364999 102 ntBASIC3.06□□□□□ -1.92
PCDHGA11Q9Y5H2 SNORA51.10-201ENST00000384418 136 ntBASIC3.06□□□□□ -1.92
PCDHGA11Q9Y5H2 RNU1-148P-201ENST00000384472 162 ntBASIC3.06□□□□□ -1.92
PCDHGA11Q9Y5H2 SNORA46-201ENST00000384762 135 ntBASIC3.06□□□□□ -1.92
PCDHGA11Q9Y5H2 MIR183-201ENST00000384958 110 ntBASIC3.06□□□□□ -1.92
PCDHGA11Q9Y5H2 U8.16-201ENST00000391279 133 ntBASIC3.06□□□□□ -1.92
PCDHGA11Q9Y5H2 MIR887-201ENST00000401258 79 ntBASIC3.06□□□□□ -1.92
PCDHGA11Q9Y5H2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.06□□□□□ -1.92
PCDHGA11Q9Y5H2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHGA11Q9Y5H2 RPL39P25-201ENST00000449384 154 ntBASIC3.06□□□□□ -1.92
PCDHGA11Q9Y5H2 RN7SL499P-201ENST00000481141 276 ntBASIC3.06□□□□□ -1.92
PCDHGA11Q9Y5H2 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.06□□□□□ -1.92
PCDHGA11Q9Y5H2 RNA5SP168-201ENST00000516642 112 ntBASIC3.06□□□□□ -1.92
PCDHGA11Q9Y5H2 AC090821.2-201ENST00000523552 176 ntBASIC3.06□□□□□ -1.92
PCDHGA11Q9Y5H2 AC022523.2-201ENST00000561045 150 ntBASIC3.06□□□□□ -1.92
PCDHGA11Q9Y5H2 ZNF861P-201ENST00000588126 639 ntBASIC3.06□□□□□ -1.92
PCDHGA11Q9Y5H2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.06□□□□□ -1.92
PCDHGA11Q9Y5H2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHGA11Q9Y5H2 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHGA11Q9Y5H2 AC108206.1-201ENST00000570186 4159 ntBASIC3.05□□□□□ -1.92
PCDHGA11Q9Y5H2 UBL5P3-201ENST00000475112 231 ntBASIC3.05□□□□□ -1.92
PCDHGA11Q9Y5H2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDHGA11Q9Y5H2 RN7SKP43-201ENST00000516173 320 ntBASIC3.05□□□□□ -1.92
PCDHGA11Q9Y5H2 HSPE1P19-201ENST00000603327 295 ntBASIC3.05□□□□□ -1.92
PCDHGA11Q9Y5H2 U6.105-201ENST00000637379 88 ntBASIC3.05□□□□□ -1.92
PCDHGA11Q9Y5H2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHGA11Q9Y5H2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHGA11Q9Y5H2 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.05□□□□□ -1.92
PCDHGA11Q9Y5H2 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHGA11Q9Y5H2 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.04□□□□□ -1.92
PCDHGA11Q9Y5H2 SNORA70.7-201ENST00000384159 133 ntBASIC3.04□□□□□ -1.92
PCDHGA11Q9Y5H2 MIR590-201ENST00000385008 97 ntBASIC3.04□□□□□ -1.92
PCDHGA11Q9Y5H2 MIR452-201ENST00000385020 85 ntBASIC3.04□□□□□ -1.92
PCDHGA11Q9Y5H2 RNA5SP465-201ENST00000391195 109 ntBASIC3.04□□□□□ -1.92
PCDHGA11Q9Y5H2 RNU2-7P-201ENST00000410794 178 ntBASIC3.04□□□□□ -1.92
PCDHGA11Q9Y5H2 RNU4-47P-201ENST00000410876 114 ntBASIC3.04□□□□□ -1.92
PCDHGA11Q9Y5H2 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.04□□□□□ -1.92
PCDHGA11Q9Y5H2 HSPE1P9-201ENST00000440046 311 ntBASIC3.04□□□□□ -1.92
PCDHGA11Q9Y5H2 UBBP3-201ENST00000445497 241 ntBASIC3.04□□□□□ -1.92
PCDHGA11Q9Y5H2 UQCRHP3-201ENST00000451503 251 ntBASIC3.04□□□□□ -1.92
PCDHGA11Q9Y5H2 AC141557.1-201ENST00000540982 400 ntBASIC3.04□□□□□ -1.92
PCDHGA11Q9Y5H2 MIR7975-201ENST00000619350 68 ntBASIC3.04□□□□□ -1.92
PCDHGA11Q9Y5H2 AC021613.1-201ENST00000623880 111 ntBASIC3.04□□□□□ -1.92
PCDHGA11Q9Y5H2 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.04□□□□□ -1.92
PCDHGA11Q9Y5H2 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHGA11Q9Y5H2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PCDHGA11Q9Y5H2 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHGA11Q9Y5H2 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.03□□□□□ -1.92
PCDHGA11Q9Y5H2 SNORA63D-201ENST00000364359 132 ntBASIC3.03□□□□□ -1.92
PCDHGA11Q9Y5H2 Y_RNA.299-201ENST00000364973 94 ntBASIC3.03□□□□□ -1.92
PCDHGA11Q9Y5H2 MIR7-3-201ENST00000384898 110 ntBASIC3.03□□□□□ -1.92
PCDHGA11Q9Y5H2 MIR597-201ENST00000384968 97 ntBASIC3.03□□□□□ -1.92
PCDHGA11Q9Y5H2 RNA5SP144-201ENST00000410846 116 ntBASIC3.03□□□□□ -1.92
PCDHGA11Q9Y5H2 RNU7-181P-201ENST00000517234 74 ntBASIC3.03□□□□□ -1.92
PCDHGA11Q9Y5H2 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.03□□□□□ -1.92
PCDHGA11Q9Y5H2 AC024614.2-201ENST00000577584 372 ntBASIC3.03□□□□□ -1.92
PCDHGA11Q9Y5H2 MIR3152-201ENST00000579801 74 ntBASIC3.03□□□□□ -1.92
PCDHGA11Q9Y5H2 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.03□□□□□ -1.92
PCDHGA11Q9Y5H2 AC096644.4-201ENST00000563417 2912 ntBASIC3.03□□□□□ -1.93
PCDHGA11Q9Y5H2 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PCDHGA11Q9Y5H2 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PCDHGA11Q9Y5H2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PCDHGA11Q9Y5H2 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
PCDHGA11Q9Y5H2 RNU4-36P-201ENST00000364294 144 ntBASIC3.02□□□□□ -1.93
PCDHGA11Q9Y5H2 RNU6-1131P-201ENST00000364955 107 ntBASIC3.02□□□□□ -1.93
PCDHGA11Q9Y5H2 Y_RNA.507-201ENST00000384500 99 ntBASIC3.02□□□□□ -1.93
PCDHGA11Q9Y5H2 RNU6-1031P-201ENST00000384773 107 ntBASIC3.02□□□□□ -1.93
PCDHGA11Q9Y5H2 MIR520A-201ENST00000384862 85 ntBASIC3.02□□□□□ -1.93
PCDHGA11Q9Y5H2 MIR136-201ENST00000385207 82 ntBASIC3.02□□□□□ -1.93
PCDHGA11Q9Y5H2 RNU6-816P-201ENST00000390914 107 ntBASIC3.02□□□□□ -1.93
PCDHGA11Q9Y5H2 RNU6-1268P-201ENST00000391214 107 ntBASIC3.02□□□□□ -1.93
PCDHGA11Q9Y5H2 RNU6-1239P-201ENST00000391310 107 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms