Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RNU4-41P-201ENST00000364426 143 ntBASIC2.21□□□□□ -2.06
PCDHB1Q9Y5F3 RNU4-11P-201ENST00000365287 132 ntBASIC2.21□□□□□ -2.06
PCDHB1Q9Y5F3 SNORD50.2-201ENST00000365465 70 ntBASIC2.21□□□□□ -2.06
PCDHB1Q9Y5F3 Y_RNA.488-201ENST00000384403 102 ntBASIC2.21□□□□□ -2.06
PCDHB1Q9Y5F3 Y_RNA.497-201ENST00000384447 98 ntBASIC2.21□□□□□ -2.06
PCDHB1Q9Y5F3 Y_RNA.568-201ENST00000384742 113 ntBASIC2.21□□□□□ -2.06
PCDHB1Q9Y5F3 SNORA80E-201ENST00000384744 137 ntBASIC2.21□□□□□ -2.06
PCDHB1Q9Y5F3 MIR15B-201ENST00000385045 98 ntBASIC2.21□□□□□ -2.06
PCDHB1Q9Y5F3 MIR548I2-201ENST00000408348 149 ntBASIC2.21□□□□□ -2.06
PCDHB1Q9Y5F3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.21□□□□□ -2.06
PCDHB1Q9Y5F3 HMGN2P23-201ENST00000456759 269 ntBASIC2.21□□□□□ -2.06
PCDHB1Q9Y5F3 Y_RNA.676-201ENST00000516393 96 ntBASIC2.21□□□□□ -2.06
PCDHB1Q9Y5F3 RNU7-121P-201ENST00000516604 62 ntBASIC2.21□□□□□ -2.06
PCDHB1Q9Y5F3 Y_RNA.714-201ENST00000517065 90 ntBASIC2.21□□□□□ -2.06
PCDHB1Q9Y5F3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.21□□□□□ -2.06
PCDHB1Q9Y5F3 MIR6132-201ENST00000622083 109 ntBASIC2.21□□□□□ -2.06
PCDHB1Q9Y5F3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
PCDHB1Q9Y5F3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
PCDHB1Q9Y5F3 SNORA6-201ENST00000384033 151 ntBASIC2.2□□□□□ -2.06
PCDHB1Q9Y5F3 RNA5SP109-201ENST00000391010 116 ntBASIC2.2□□□□□ -2.06
PCDHB1Q9Y5F3 SNORA48.3-201ENST00000391081 134 ntBASIC2.2□□□□□ -2.06
PCDHB1Q9Y5F3 RPS27P1-201ENST00000450552 247 ntBASIC2.2□□□□□ -2.06
PCDHB1Q9Y5F3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.2□□□□□ -2.06
PCDHB1Q9Y5F3 AC005840.1-201ENST00000498412 377 ntBASIC2.2□□□□□ -2.06
PCDHB1Q9Y5F3 SNORA25.12-201ENST00000516202 82 ntBASIC2.2□□□□□ -2.06
PCDHB1Q9Y5F3 RNA5SP200-201ENST00000516360 103 ntBASIC2.2□□□□□ -2.06
PCDHB1Q9Y5F3 RNA5SP481-201ENST00000516814 122 ntBASIC2.2□□□□□ -2.06
PCDHB1Q9Y5F3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.2□□□□□ -2.06
PCDHB1Q9Y5F3 IGLV3-17-201ENST00000519099 244 ntBASIC2.2□□□□□ -2.06
PCDHB1Q9Y5F3 AP001485.1-201ENST00000604799 199 ntBASIC2.2□□□□□ -2.06
PCDHB1Q9Y5F3 SNORA28-201ENST00000606769 126 ntBASIC2.2□□□□□ -2.06
PCDHB1Q9Y5F3 AL391903.3-201ENST00000612158 163 ntBASIC2.2□□□□□ -2.06
PCDHB1Q9Y5F3 JPX_2.1-201ENST00000614161 69 ntBASIC2.2□□□□□ -2.06
PCDHB1Q9Y5F3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
PCDHB1Q9Y5F3 SNORA1B-201ENST00000362535 133 ntBASIC2.19□□□□□ -2.06
PCDHB1Q9Y5F3 RNU6-112P-201ENST00000363599 104 ntBASIC2.19□□□□□ -2.06
PCDHB1Q9Y5F3 RNU6-1080P-201ENST00000383982 107 ntBASIC2.19□□□□□ -2.06
PCDHB1Q9Y5F3 RNY3P5-201ENST00000384127 102 ntBASIC2.19□□□□□ -2.06
PCDHB1Q9Y5F3 SNORA67.3-201ENST00000384366 140 ntBASIC2.19□□□□□ -2.06
PCDHB1Q9Y5F3 MIR221-201ENST00000385135 110 ntBASIC2.19□□□□□ -2.06
PCDHB1Q9Y5F3 RNA5SP212-201ENST00000391223 107 ntBASIC2.19□□□□□ -2.06
PCDHB1Q9Y5F3 RNA5SP482-201ENST00000391269 118 ntBASIC2.19□□□□□ -2.06
PCDHB1Q9Y5F3 RNU6-257P-201ENST00000410238 98 ntBASIC2.19□□□□□ -2.06
PCDHB1Q9Y5F3 RN7SKP200-201ENST00000410564 320 ntBASIC2.19□□□□□ -2.06
PCDHB1Q9Y5F3 HMGN1P7-201ENST00000491722 313 ntBASIC2.19□□□□□ -2.06
PCDHB1Q9Y5F3 AL049861.1-201ENST00000603130 150 ntBASIC2.19□□□□□ -2.06
PCDHB1Q9Y5F3 MIR8054-201ENST00000620877 86 ntBASIC2.19□□□□□ -2.06
PCDHB1Q9Y5F3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
PCDHB1Q9Y5F3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
PCDHB1Q9Y5F3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.18□□□□□ -2.06
PCDHB1Q9Y5F3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PCDHB1Q9Y5F3 Y_RNA.265-201ENST00000364677 108 ntBASIC2.18□□□□□ -2.06
PCDHB1Q9Y5F3 Y_RNA.291-201ENST00000364886 113 ntBASIC2.18□□□□□ -2.06
PCDHB1Q9Y5F3 RNU6-81P-201ENST00000365608 104 ntBASIC2.18□□□□□ -2.06
PCDHB1Q9Y5F3 RNU6-1336P-201ENST00000383886 109 ntBASIC2.18□□□□□ -2.06
PCDHB1Q9Y5F3 RNU6-643P-201ENST00000384018 107 ntBASIC2.18□□□□□ -2.06
PCDHB1Q9Y5F3 RNU6-440P-201ENST00000390882 105 ntBASIC2.18□□□□□ -2.06
PCDHB1Q9Y5F3 RNU6-1228P-201ENST00000391014 107 ntBASIC2.18□□□□□ -2.06
PCDHB1Q9Y5F3 RN7SKP101-201ENST00000411376 320 ntBASIC2.18□□□□□ -2.06
PCDHB1Q9Y5F3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.18□□□□□ -2.06
PCDHB1Q9Y5F3 AC107027.2-201ENST00000512197 115 ntBASIC2.18□□□□□ -2.06
PCDHB1Q9Y5F3 RNA5SP458-201ENST00000516188 119 ntBASIC2.18□□□□□ -2.06
PCDHB1Q9Y5F3 AC121758.2-201ENST00000553271 193 ntBASIC2.18□□□□□ -2.06
PCDHB1Q9Y5F3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
PCDHB1Q9Y5F3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.17□□□□□ -2.06
PCDHB1Q9Y5F3 SNORD45.3-201ENST00000363836 72 ntBASIC2.17□□□□□ -2.06
PCDHB1Q9Y5F3 Y_RNA.343-201ENST00000365354 112 ntBASIC2.17□□□□□ -2.06
PCDHB1Q9Y5F3 RNU6-296P-201ENST00000384608 107 ntBASIC2.17□□□□□ -2.06
PCDHB1Q9Y5F3 RNU6-768P-201ENST00000384683 107 ntBASIC2.17□□□□□ -2.06
PCDHB1Q9Y5F3 Y_RNA.586-201ENST00000391146 98 ntBASIC2.17□□□□□ -2.06
PCDHB1Q9Y5F3 Y_RNA.587-201ENST00000391210 103 ntBASIC2.17□□□□□ -2.06
PCDHB1Q9Y5F3 AL606517.2-201ENST00000442855 241 ntBASIC2.17□□□□□ -2.06
PCDHB1Q9Y5F3 SNRPGP8-201ENST00000454064 226 ntBASIC2.17□□□□□ -2.06
PCDHB1Q9Y5F3 AC104435.1-201ENST00000483483 166 ntBASIC2.17□□□□□ -2.06
PCDHB1Q9Y5F3 RPL23AP91-201ENST00000569211 455 ntBASIC2.17□□□□□ -2.06
PCDHB1Q9Y5F3 DNAJC19P2-201ENST00000593340 302 ntBASIC2.17□□□□□ -2.06
PCDHB1Q9Y5F3 AC091895.1-201ENST00000624494 256 ntBASIC2.17□□□□□ -2.06
PCDHB1Q9Y5F3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
PCDHB1Q9Y5F3 AC005336.3-201ENST00000623833 2679 ntBASIC2.16□□□□□ -2.06
PCDHB1Q9Y5F3 AL596028.1-201ENST00000326971 197 ntBASIC2.16□□□□□ -2.06
PCDHB1Q9Y5F3 RNU6-1209P-201ENST00000363655 107 ntBASIC2.16□□□□□ -2.06
PCDHB1Q9Y5F3 Y_RNA.796-201ENST00000364268 102 ntBASIC2.16□□□□□ -2.06
PCDHB1Q9Y5F3 Y_RNA.253-201ENST00000364562 112 ntBASIC2.16□□□□□ -2.06
PCDHB1Q9Y5F3 Y_RNA.799-201ENST00000364992 102 ntBASIC2.16□□□□□ -2.06
PCDHB1Q9Y5F3 AL023284.1-201ENST00000403956 276 ntBASIC2.16□□□□□ -2.06
PCDHB1Q9Y5F3 RNA5SP100-201ENST00000410903 110 ntBASIC2.16□□□□□ -2.06
PCDHB1Q9Y5F3 RNA5SP59-201ENST00000410922 110 ntBASIC2.16□□□□□ -2.06
PCDHB1Q9Y5F3 AL158823.1-201ENST00000418441 478 ntBASIC2.16□□□□□ -2.06
PCDHB1Q9Y5F3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.16□□□□□ -2.06
PCDHB1Q9Y5F3 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.16□□□□□ -2.06
PCDHB1Q9Y5F3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.16□□□□□ -2.06
PCDHB1Q9Y5F3 MIR548X2-201ENST00000579776 100 ntBASIC2.16□□□□□ -2.06
PCDHB1Q9Y5F3 AL021707.8-201ENST00000609428 183 ntBASIC2.16□□□□□ -2.06
PCDHB1Q9Y5F3 MIR6840-201ENST00000611937 71 ntBASIC2.16□□□□□ -2.06
PCDHB1Q9Y5F3 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.16□□□□□ -2.06
PCDHB1Q9Y5F3 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.16□□□□□ -2.06
PCDHB1Q9Y5F3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
PCDHB1Q9Y5F3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
PCDHB1Q9Y5F3 Y_RNA.242-201ENST00000364473 110 ntBASIC2.15□□□□□ -2.07
PCDHB1Q9Y5F3 RNU6-728P-201ENST00000365375 104 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 195.9 ms