Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 AC093850.1-201ENST00000454121 251 ntBASIC1.5□□□□□ -2.17
KDM3AQ9Y4C1 RNU1-123P-201ENST00000458950 160 ntBASIC1.5□□□□□ -2.17
KDM3AQ9Y4C1 AC098869.1-201ENST00000481627 292 ntBASIC1.5□□□□□ -2.17
KDM3AQ9Y4C1 RNU6-1007P-201ENST00000516586 107 ntBASIC1.5□□□□□ -2.17
KDM3AQ9Y4C1 Y_RNA.720-201ENST00000517166 92 ntBASIC1.5□□□□□ -2.17
KDM3AQ9Y4C1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.5□□□□□ -2.17
KDM3AQ9Y4C1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
KDM3AQ9Y4C1 snoU2-30.1-201ENST00000365012 70 ntBASIC1.49□□□□□ -2.17
KDM3AQ9Y4C1 RNU6-806P-201ENST00000365147 105 ntBASIC1.49□□□□□ -2.17
KDM3AQ9Y4C1 SNORA2.2-201ENST00000365473 135 ntBASIC1.49□□□□□ -2.17
KDM3AQ9Y4C1 MIR606-201ENST00000384851 96 ntBASIC1.49□□□□□ -2.17
KDM3AQ9Y4C1 MIR802-201ENST00000390235 94 ntBASIC1.49□□□□□ -2.17
KDM3AQ9Y4C1 SNORA36B-201ENST00000410438 131 ntBASIC1.49□□□□□ -2.17
KDM3AQ9Y4C1 DYNLT3P2-201ENST00000442517 295 ntBASIC1.49□□□□□ -2.17
KDM3AQ9Y4C1 HMGN2P32-201ENST00000444648 269 ntBASIC1.49□□□□□ -2.17
KDM3AQ9Y4C1 RNU7-141P-201ENST00000459304 62 ntBASIC1.49□□□□□ -2.17
KDM3AQ9Y4C1 AC092991.1-201ENST00000477176 376 ntBASIC1.49□□□□□ -2.17
KDM3AQ9Y4C1 MIR4762-201ENST00000585261 75 ntBASIC1.49□□□□□ -2.17
KDM3AQ9Y4C1 MIRLET7C-201ENST00000362160 84 ntBASIC1.48□□□□□ -2.17
KDM3AQ9Y4C1 snoU2_19.2-201ENST00000363024 80 ntBASIC1.48□□□□□ -2.17
KDM3AQ9Y4C1 Y_RNA.122-201ENST00000363331 96 ntBASIC1.48□□□□□ -2.17
KDM3AQ9Y4C1 Y_RNA.541-201ENST00000384640 113 ntBASIC1.48□□□□□ -2.17
KDM3AQ9Y4C1 MIR215-201ENST00000384858 110 ntBASIC1.48□□□□□ -2.17
KDM3AQ9Y4C1 MIR452-201ENST00000385020 85 ntBASIC1.48□□□□□ -2.17
KDM3AQ9Y4C1 MTCO2P33-201ENST00000402100 465 ntBASIC1.48□□□□□ -2.17
KDM3AQ9Y4C1 RNU6-437P-201ENST00000459408 95 ntBASIC1.48□□□□□ -2.17
KDM3AQ9Y4C1 AC114811.1-201ENST00000507207 168 ntBASIC1.48□□□□□ -2.17
KDM3AQ9Y4C1 RNU6-635P-201ENST00000516651 102 ntBASIC1.48□□□□□ -2.17
KDM3AQ9Y4C1 RNU6-922P-201ENST00000516753 99 ntBASIC1.48□□□□□ -2.17
KDM3AQ9Y4C1 AC090049.2-201ENST00000550377 109 ntBASIC1.48□□□□□ -2.17
KDM3AQ9Y4C1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.48□□□□□ -2.17
KDM3AQ9Y4C1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
KDM3AQ9Y4C1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
KDM3AQ9Y4C1 RNU6-801P-201ENST00000364087 105 ntBASIC1.47□□□□□ -2.17
KDM3AQ9Y4C1 Y_RNA.224-201ENST00000364308 111 ntBASIC1.47□□□□□ -2.17
KDM3AQ9Y4C1 MIR522-201ENST00000385071 87 ntBASIC1.47□□□□□ -2.17
KDM3AQ9Y4C1 RNU6-1109P-201ENST00000391187 107 ntBASIC1.47□□□□□ -2.17
KDM3AQ9Y4C1 AC023449.1-201ENST00000454464 154 ntBASIC1.47□□□□□ -2.17
KDM3AQ9Y4C1 RN7SKP88-201ENST00000516847 250 ntBASIC1.47□□□□□ -2.17
KDM3AQ9Y4C1 RNU6-1116P-201ENST00000517269 99 ntBASIC1.47□□□□□ -2.17
KDM3AQ9Y4C1 AL512310.8-201ENST00000550183 120 ntBASIC1.47□□□□□ -2.17
KDM3AQ9Y4C1 AL357312.1-201ENST00000603879 298 ntBASIC1.47□□□□□ -2.17
KDM3AQ9Y4C1 7SK.8-201ENST00000612110 250 ntBASIC1.47□□□□□ -2.17
KDM3AQ9Y4C1 7SK.11-201ENST00000615477 250 ntBASIC1.47□□□□□ -2.17
KDM3AQ9Y4C1 MIR8065-201ENST00000620577 100 ntBASIC1.47□□□□□ -2.17
KDM3AQ9Y4C1 7SK.13-201ENST00000622040 250 ntBASIC1.47□□□□□ -2.17
KDM3AQ9Y4C1 Y_RNA.84-201ENST00000363011 104 ntBASIC1.46□□□□□ -2.18
KDM3AQ9Y4C1 Y_RNA.145-201ENST00000363527 102 ntBASIC1.46□□□□□ -2.18
KDM3AQ9Y4C1 RNU6-1205P-201ENST00000363625 106 ntBASIC1.46□□□□□ -2.18
KDM3AQ9Y4C1 RNU6-1048P-201ENST00000364054 107 ntBASIC1.46□□□□□ -2.18
KDM3AQ9Y4C1 RNU6-53P-201ENST00000365367 106 ntBASIC1.46□□□□□ -2.18
KDM3AQ9Y4C1 RNU6-144P-201ENST00000383951 107 ntBASIC1.46□□□□□ -2.18
KDM3AQ9Y4C1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
KDM3AQ9Y4C1 SNORA40.6-201ENST00000391153 128 ntBASIC1.46□□□□□ -2.18
KDM3AQ9Y4C1 AC004223.1-201ENST00000479840 271 ntBASIC1.46□□□□□ -2.18
KDM3AQ9Y4C1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.46□□□□□ -2.18
KDM3AQ9Y4C1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.46□□□□□ -2.18
KDM3AQ9Y4C1 GHRLOS.1-201ENST00000610995 70 ntBASIC1.46□□□□□ -2.18
KDM3AQ9Y4C1 MIR6504-201ENST00000613520 61 ntBASIC1.46□□□□□ -2.18
KDM3AQ9Y4C1 MIR7974-201ENST00000615835 79 ntBASIC1.46□□□□□ -2.18
KDM3AQ9Y4C1 AC134026.1-201ENST00000623249 2239 ntBASIC1.46□□□□□ -2.18
KDM3AQ9Y4C1 Y_RNA.26-201ENST00000362539 101 ntBASIC1.45□□□□□ -2.18
KDM3AQ9Y4C1 Y_RNA.242-201ENST00000364473 110 ntBASIC1.45□□□□□ -2.18
KDM3AQ9Y4C1 MIR653-201ENST00000385279 96 ntBASIC1.45□□□□□ -2.18
KDM3AQ9Y4C1 AC091959.1-201ENST00000495857 238 ntBASIC1.45□□□□□ -2.18
KDM3AQ9Y4C1 SNORD45.4-201ENST00000516629 73 ntBASIC1.45□□□□□ -2.18
KDM3AQ9Y4C1 RNU6-570P-201ENST00000517051 105 ntBASIC1.45□□□□□ -2.18
KDM3AQ9Y4C1 AC068338.1-201ENST00000565567 176 ntBASIC1.45□□□□□ -2.18
KDM3AQ9Y4C1 MIR3664-201ENST00000579074 99 ntBASIC1.45□□□□□ -2.18
KDM3AQ9Y4C1 AC087685.1-201ENST00000587507 141 ntBASIC1.45□□□□□ -2.18
KDM3AQ9Y4C1 AL161722.3-201ENST00000605789 2983 ntBASIC1.45□□□□□ -2.18
KDM3AQ9Y4C1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
KDM3AQ9Y4C1 RNU6-238P-201ENST00000363313 106 ntBASIC1.44□□□□□ -2.18
KDM3AQ9Y4C1 RNU6-674P-201ENST00000363831 107 ntBASIC1.44□□□□□ -2.18
KDM3AQ9Y4C1 SNORD14E-201ENST00000364009 85 ntBASIC1.44□□□□□ -2.18
KDM3AQ9Y4C1 MIR150-201ENST00000385048 84 ntBASIC1.44□□□□□ -2.18
KDM3AQ9Y4C1 RNU6-763P-201ENST00000390865 106 ntBASIC1.44□□□□□ -2.18
KDM3AQ9Y4C1 SNORA26.5-201ENST00000391215 123 ntBASIC1.44□□□□□ -2.18
KDM3AQ9Y4C1 RNU2-14P-201ENST00000411053 191 ntBASIC1.44□□□□□ -2.18
KDM3AQ9Y4C1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.44□□□□□ -2.18
KDM3AQ9Y4C1 RPL39P39-201ENST00000455840 151 ntBASIC1.44□□□□□ -2.18
KDM3AQ9Y4C1 MTND5P22-201ENST00000458380 195 ntBASIC1.44□□□□□ -2.18
KDM3AQ9Y4C1 snoU13.18-201ENST00000459483 104 ntBASIC1.44□□□□□ -2.18
KDM3AQ9Y4C1 TRBVB-201ENST00000477100 408 ntBASIC1.44□□□□□ -2.18
KDM3AQ9Y4C1 SERF1AP1-201ENST00000514575 187 ntBASIC1.44□□□□□ -2.18
KDM3AQ9Y4C1 FAM106DP-201ENST00000586416 501 ntBASIC1.44□□□□□ -2.18
KDM3AQ9Y4C1 AC008737.2-201ENST00000599446 118 ntBASIC1.44□□□□□ -2.18
KDM3AQ9Y4C1 MIR6078-201ENST00000611069 100 ntBASIC1.44□□□□□ -2.18
KDM3AQ9Y4C1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.44□□□□□ -2.18
KDM3AQ9Y4C1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KDM3AQ9Y4C1 Y_RNA.176-201ENST00000363815 109 ntBASIC1.43□□□□□ -2.18
KDM3AQ9Y4C1 MIR15B-201ENST00000385045 98 ntBASIC1.43□□□□□ -2.18
KDM3AQ9Y4C1 MIR1302-6-201ENST00000408466 90 ntBASIC1.43□□□□□ -2.18
KDM3AQ9Y4C1 RNU6-1338P-201ENST00000516328 91 ntBASIC1.43□□□□□ -2.18
KDM3AQ9Y4C1 SNORA27.4-201ENST00000516650 95 ntBASIC1.43□□□□□ -2.18
KDM3AQ9Y4C1 SCARNA24.2-201ENST00000516968 130 ntBASIC1.43□□□□□ -2.18
KDM3AQ9Y4C1 AL160236.1-201ENST00000556317 195 ntBASIC1.43□□□□□ -2.18
KDM3AQ9Y4C1 CYP3A52P-201ENST00000563326 91 ntBASIC1.43□□□□□ -2.18
KDM3AQ9Y4C1 SNORA4-201ENST00000584302 138 ntBASIC1.43□□□□□ -2.18
KDM3AQ9Y4C1 MIR4719-201ENST00000585233 84 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms