Protein–RNA interactions for Protein: Q9UPN9

TRIM33, E3 ubiquitin-protein ligase TRIM33, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM33Q9UPN9 AC078899.2-201ENST00000595282 212 ntBASIC2.94□□□□□ -1.94
TRIM33Q9UPN9 SNORD115-40-201ENST00000606510 82 ntBASIC2.94□□□□□ -1.94
TRIM33Q9UPN9 U4atac.1-201ENST00000618345 95 ntBASIC2.94□□□□□ -1.94
TRIM33Q9UPN9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
TRIM33Q9UPN9 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
TRIM33Q9UPN9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.93□□□□□ -1.94
TRIM33Q9UPN9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.93□□□□□ -1.94
TRIM33Q9UPN9 RNU1-33P-201ENST00000364249 162 ntBASIC2.93□□□□□ -1.94
TRIM33Q9UPN9 SNORD38C-201ENST00000384381 69 ntBASIC2.93□□□□□ -1.94
TRIM33Q9UPN9 MIR490-201ENST00000384865 128 ntBASIC2.93□□□□□ -1.94
TRIM33Q9UPN9 AC092427.1-202ENST00000430569 476 ntBASIC2.93□□□□□ -1.94
TRIM33Q9UPN9 RPL39P25-201ENST00000449384 154 ntBASIC2.93□□□□□ -1.94
TRIM33Q9UPN9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
TRIM33Q9UPN9 MIR3169-201ENST00000578032 83 ntBASIC2.93□□□□□ -1.94
TRIM33Q9UPN9 AC062037.1-201ENST00000605302 128 ntBASIC2.93□□□□□ -1.94
TRIM33Q9UPN9 MALAT1.1-201ENST00000618249 95 ntBASIC2.93□□□□□ -1.94
TRIM33Q9UPN9 MIR622-201ENST00000638396 96 ntBASIC2.93□□□□□ -1.94
TRIM33Q9UPN9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM33Q9UPN9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM33Q9UPN9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM33Q9UPN9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM33Q9UPN9 AL035425.3-201ENST00000564206 4996 ntBASIC2.92□□□□□ -1.94
TRIM33Q9UPN9 AC073325.2-201ENST00000339545 159 ntBASIC2.92□□□□□ -1.94
TRIM33Q9UPN9 RNY1P7-201ENST00000384743 110 ntBASIC2.92□□□□□ -1.94
TRIM33Q9UPN9 SNORD67-201ENST00000390833 111 ntBASIC2.92□□□□□ -1.94
TRIM33Q9UPN9 AL606517.2-201ENST00000442855 241 ntBASIC2.92□□□□□ -1.94
TRIM33Q9UPN9 AC091153.1-201ENST00000466297 402 ntBASIC2.92□□□□□ -1.94
TRIM33Q9UPN9 AL049873.1-201ENST00000480540 376 ntBASIC2.92□□□□□ -1.94
TRIM33Q9UPN9 U6.105-201ENST00000637379 88 ntBASIC2.92□□□□□ -1.94
TRIM33Q9UPN9 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
TRIM33Q9UPN9 AL442644.1-201ENST00000454390 3105 ntBASIC2.91□□□□□ -1.94
TRIM33Q9UPN9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TRIM33Q9UPN9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
TRIM33Q9UPN9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
TRIM33Q9UPN9 Y_RNA.107-201ENST00000363190 121 ntBASIC2.91□□□□□ -1.94
TRIM33Q9UPN9 RNA5SP72-201ENST00000364442 117 ntBASIC2.91□□□□□ -1.94
TRIM33Q9UPN9 MIR183-201ENST00000384958 110 ntBASIC2.91□□□□□ -1.94
TRIM33Q9UPN9 RNU6-816P-201ENST00000390914 107 ntBASIC2.91□□□□□ -1.94
TRIM33Q9UPN9 RNU6-1268P-201ENST00000391214 107 ntBASIC2.91□□□□□ -1.94
TRIM33Q9UPN9 RNU6-1239P-201ENST00000391310 107 ntBASIC2.91□□□□□ -1.94
TRIM33Q9UPN9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM33Q9UPN9 AL035398.1-201ENST00000430869 322 ntBASIC2.91□□□□□ -1.94
TRIM33Q9UPN9 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.91□□□□□ -1.94
TRIM33Q9UPN9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM33Q9UPN9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.91□□□□□ -1.94
TRIM33Q9UPN9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TRIM33Q9UPN9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TRIM33Q9UPN9 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.9□□□□□ -1.94
TRIM33Q9UPN9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
TRIM33Q9UPN9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.9□□□□□ -1.94
TRIM33Q9UPN9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.9□□□□□ -1.94
TRIM33Q9UPN9 RNU4-36P-201ENST00000364294 144 ntBASIC2.9□□□□□ -1.95
TRIM33Q9UPN9 SNORA63D-201ENST00000364359 132 ntBASIC2.9□□□□□ -1.95
TRIM33Q9UPN9 SNORA7.4-201ENST00000384249 137 ntBASIC2.9□□□□□ -1.95
TRIM33Q9UPN9 Y_RNA.466-201ENST00000384294 113 ntBASIC2.9□□□□□ -1.95
TRIM33Q9UPN9 SNORA11.4-201ENST00000408823 129 ntBASIC2.9□□□□□ -1.95
TRIM33Q9UPN9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.9□□□□□ -1.95
TRIM33Q9UPN9 RNU7-6P-201ENST00000516845 62 ntBASIC2.9□□□□□ -1.95
TRIM33Q9UPN9 AP003327.1-201ENST00000529684 127 ntBASIC2.9□□□□□ -1.95
TRIM33Q9UPN9 DEFB131E-201ENST00000532329 154 ntBASIC2.9□□□□□ -1.95
TRIM33Q9UPN9 AC107016.2-201ENST00000547968 190 ntBASIC2.9□□□□□ -1.95
TRIM33Q9UPN9 AC027279.3-201ENST00000625055 122 ntBASIC2.9□□□□□ -1.95
TRIM33Q9UPN9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TRIM33Q9UPN9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM33Q9UPN9 RNU6-23P-201ENST00000363283 107 ntBASIC2.89□□□□□ -1.95
TRIM33Q9UPN9 Y_RNA.333-201ENST00000365274 102 ntBASIC2.89□□□□□ -1.95
TRIM33Q9UPN9 Y_RNA.342-201ENST00000365352 113 ntBASIC2.89□□□□□ -1.95
TRIM33Q9UPN9 RNU6-820P-201ENST00000384273 107 ntBASIC2.89□□□□□ -1.95
TRIM33Q9UPN9 SNORA27-201ENST00000384323 126 ntBASIC2.89□□□□□ -1.95
TRIM33Q9UPN9 MIR450A2-201ENST00000385022 100 ntBASIC2.89□□□□□ -1.95
TRIM33Q9UPN9 AC107297.1-201ENST00000459991 176 ntBASIC2.89□□□□□ -1.95
TRIM33Q9UPN9 AC114811.1-201ENST00000507207 168 ntBASIC2.89□□□□□ -1.95
TRIM33Q9UPN9 RN7SKP12-201ENST00000516275 143 ntBASIC2.89□□□□□ -1.95
TRIM33Q9UPN9 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.89□□□□□ -1.95
TRIM33Q9UPN9 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.89□□□□□ -1.95
TRIM33Q9UPN9 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.89□□□□□ -1.95
TRIM33Q9UPN9 HSPE1P19-201ENST00000603327 295 ntBASIC2.89□□□□□ -1.95
TRIM33Q9UPN9 SNORA28-201ENST00000606769 126 ntBASIC2.89□□□□□ -1.95
TRIM33Q9UPN9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM33Q9UPN9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.89□□□□□ -1.95
TRIM33Q9UPN9 AL449363.1-201ENST00000617815 186 ntBASIC2.89□□□□□ -1.95
TRIM33Q9UPN9 MIR208A-201ENST00000362287 71 ntBASIC2.88□□□□□ -1.95
TRIM33Q9UPN9 RNU4-16P-201ENST00000364737 141 ntBASIC2.88□□□□□ -1.95
TRIM33Q9UPN9 RNVU1-14-201ENST00000384770 164 ntBASIC2.88□□□□□ -1.95
TRIM33Q9UPN9 MIR34B-201ENST00000385076 84 ntBASIC2.88□□□□□ -1.95
TRIM33Q9UPN9 RNA5SP109-201ENST00000391010 116 ntBASIC2.88□□□□□ -1.95
TRIM33Q9UPN9 RN7SKP200-201ENST00000410564 320 ntBASIC2.88□□□□□ -1.95
TRIM33Q9UPN9 RNA5SP144-201ENST00000410846 116 ntBASIC2.88□□□□□ -1.95
TRIM33Q9UPN9 RNU7-96P-201ENST00000459535 64 ntBASIC2.88□□□□□ -1.95
TRIM33Q9UPN9 RNU6-998P-201ENST00000515894 101 ntBASIC2.88□□□□□ -1.95
TRIM33Q9UPN9 SCARNA23-201ENST00000516060 130 ntBASIC2.88□□□□□ -1.95
TRIM33Q9UPN9 SCARNA13-201ENST00000516672 275 ntBASIC2.88□□□□□ -1.95
TRIM33Q9UPN9 MIR8054-201ENST00000620877 86 ntBASIC2.88□□□□□ -1.95
TRIM33Q9UPN9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TRIM33Q9UPN9 MIRLET7C-201ENST00000362160 84 ntBASIC2.87□□□□□ -1.95
TRIM33Q9UPN9 RNU6-661P-201ENST00000362409 107 ntBASIC2.87□□□□□ -1.95
TRIM33Q9UPN9 SNORD115-34-201ENST00000362441 82 ntBASIC2.87□□□□□ -1.95
TRIM33Q9UPN9 SNORD115-12-201ENST00000362583 82 ntBASIC2.87□□□□□ -1.95
TRIM33Q9UPN9 SNORD115-29-201ENST00000362834 82 ntBASIC2.87□□□□□ -1.95
TRIM33Q9UPN9 SNORD115-9-201ENST00000362912 82 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 230.3 ms