Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 SNORD50B-201ENST00000364995 70 ntBASIC2.05□□□□□ -2.08
NIPSNAP3AQ9UFN0 SNORD72-201ENST00000390994 80 ntBASIC2.05□□□□□ -2.08
NIPSNAP3AQ9UFN0 U8.16-201ENST00000391279 133 ntBASIC2.05□□□□□ -2.08
NIPSNAP3AQ9UFN0 RNU2-70P-201ENST00000410718 179 ntBASIC2.05□□□□□ -2.08
NIPSNAP3AQ9UFN0 RNU2-55P-201ENST00000411146 174 ntBASIC2.05□□□□□ -2.08
NIPSNAP3AQ9UFN0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.05□□□□□ -2.08
NIPSNAP3AQ9UFN0 AL021397.1-201ENST00000451806 248 ntBASIC2.05□□□□□ -2.08
NIPSNAP3AQ9UFN0 MRPS17P9-201ENST00000511924 393 ntBASIC2.05□□□□□ -2.08
NIPSNAP3AQ9UFN0 RNA5SP168-201ENST00000516642 112 ntBASIC2.05□□□□□ -2.08
NIPSNAP3AQ9UFN0 RNU1-40P-201ENST00000516816 164 ntBASIC2.05□□□□□ -2.08
NIPSNAP3AQ9UFN0 RNU1-97P-201ENST00000516872 164 ntBASIC2.05□□□□□ -2.08
NIPSNAP3AQ9UFN0 RNU6-1116P-201ENST00000517269 99 ntBASIC2.05□□□□□ -2.08
NIPSNAP3AQ9UFN0 MIR4662B-201ENST00000579498 81 ntBASIC2.05□□□□□ -2.08
NIPSNAP3AQ9UFN0 Y_RNA.242-201ENST00000364473 110 ntBASIC2.04□□□□□ -2.08
NIPSNAP3AQ9UFN0 RNU6-1138P-201ENST00000365359 106 ntBASIC2.04□□□□□ -2.08
NIPSNAP3AQ9UFN0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
NIPSNAP3AQ9UFN0 RNU6-424P-201ENST00000384367 105 ntBASIC2.04□□□□□ -2.08
NIPSNAP3AQ9UFN0 RPL30P13-201ENST00000418873 348 ntBASIC2.04□□□□□ -2.08
NIPSNAP3AQ9UFN0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.04□□□□□ -2.08
NIPSNAP3AQ9UFN0 RN7SL429P-201ENST00000479090 223 ntBASIC2.04□□□□□ -2.08
NIPSNAP3AQ9UFN0 RN7SL489P-201ENST00000486185 223 ntBASIC2.04□□□□□ -2.08
NIPSNAP3AQ9UFN0 RN7SL327P-201ENST00000488659 223 ntBASIC2.04□□□□□ -2.08
NIPSNAP3AQ9UFN0 CYCTP-201ENST00000504253 315 ntBASIC2.04□□□□□ -2.08
NIPSNAP3AQ9UFN0 AC114811.1-201ENST00000507207 168 ntBASIC2.04□□□□□ -2.08
NIPSNAP3AQ9UFN0 SNORD45.4-201ENST00000516629 73 ntBASIC2.04□□□□□ -2.08
NIPSNAP3AQ9UFN0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.04□□□□□ -2.08
NIPSNAP3AQ9UFN0 MIR4299-201ENST00000577899 72 ntBASIC2.04□□□□□ -2.08
NIPSNAP3AQ9UFN0 MIR4431-201ENST00000579990 94 ntBASIC2.04□□□□□ -2.08
NIPSNAP3AQ9UFN0 RN7SL853P-201ENST00000617250 223 ntBASIC2.04□□□□□ -2.08
NIPSNAP3AQ9UFN0 AL590808.1-201ENST00000618696 141 ntBASIC2.04□□□□□ -2.08
NIPSNAP3AQ9UFN0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
NIPSNAP3AQ9UFN0 RNU6-414P-201ENST00000363705 104 ntBASIC2.03□□□□□ -2.08
NIPSNAP3AQ9UFN0 RNA5SP160-201ENST00000364866 120 ntBASIC2.03□□□□□ -2.08
NIPSNAP3AQ9UFN0 RNA5SP138-201ENST00000365098 114 ntBASIC2.03□□□□□ -2.08
NIPSNAP3AQ9UFN0 RNU6-484P-201ENST00000384016 107 ntBASIC2.03□□□□□ -2.08
NIPSNAP3AQ9UFN0 RNU6-643P-201ENST00000384018 107 ntBASIC2.03□□□□□ -2.08
NIPSNAP3AQ9UFN0 RNU5E-9P-201ENST00000411164 104 ntBASIC2.03□□□□□ -2.08
NIPSNAP3AQ9UFN0 AC006461.1-201ENST00000412637 326 ntBASIC2.03□□□□□ -2.08
NIPSNAP3AQ9UFN0 AC025033.1-201ENST00000463883 194 ntBASIC2.03□□□□□ -2.08
NIPSNAP3AQ9UFN0 AC099513.1-201ENST00000490423 301 ntBASIC2.03□□□□□ -2.08
NIPSNAP3AQ9UFN0 RNU7-12P-201ENST00000516030 62 ntBASIC2.03□□□□□ -2.08
NIPSNAP3AQ9UFN0 RNA5SP200-201ENST00000516360 103 ntBASIC2.03□□□□□ -2.08
NIPSNAP3AQ9UFN0 RNU6-126P-201ENST00000516685 103 ntBASIC2.03□□□□□ -2.08
NIPSNAP3AQ9UFN0 AC002984.1-201ENST00000591692 448 ntBASIC2.03□□□□□ -2.08
NIPSNAP3AQ9UFN0 AC104465.1-201ENST00000611365 139 ntBASIC2.03□□□□□ -2.08
NIPSNAP3AQ9UFN0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.03□□□□□ -2.08
NIPSNAP3AQ9UFN0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
NIPSNAP3AQ9UFN0 MIRLET7C-201ENST00000362160 84 ntBASIC2.02□□□□□ -2.09
NIPSNAP3AQ9UFN0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
NIPSNAP3AQ9UFN0 SNORA48.3-201ENST00000391081 134 ntBASIC2.02□□□□□ -2.09
NIPSNAP3AQ9UFN0 RNU4-43P-201ENST00000410628 137 ntBASIC2.02□□□□□ -2.09
NIPSNAP3AQ9UFN0 PGBD4P5-201ENST00000445958 426 ntBASIC2.02□□□□□ -2.09
NIPSNAP3AQ9UFN0 AC008413.1-201ENST00000511864 177 ntBASIC2.02□□□□□ -2.09
NIPSNAP3AQ9UFN0 AC107027.2-201ENST00000512197 115 ntBASIC2.02□□□□□ -2.09
NIPSNAP3AQ9UFN0 RNA5SP364-201ENST00000516938 78 ntBASIC2.02□□□□□ -2.09
NIPSNAP3AQ9UFN0 MIR5002-201ENST00000584713 97 ntBASIC2.02□□□□□ -2.09
NIPSNAP3AQ9UFN0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
NIPSNAP3AQ9UFN0 RNU6-442P-201ENST00000383968 104 ntBASIC2.01□□□□□ -2.09
NIPSNAP3AQ9UFN0 Y_RNA.441-201ENST00000384123 112 ntBASIC2.01□□□□□ -2.09
NIPSNAP3AQ9UFN0 RNU6-439P-201ENST00000384188 106 ntBASIC2.01□□□□□ -2.09
NIPSNAP3AQ9UFN0 Y_RNA.486-201ENST00000384398 107 ntBASIC2.01□□□□□ -2.09
NIPSNAP3AQ9UFN0 SNORA26-201ENST00000391286 122 ntBASIC2.01□□□□□ -2.09
NIPSNAP3AQ9UFN0 RNA5SP338-201ENST00000410495 85 ntBASIC2.01□□□□□ -2.09
NIPSNAP3AQ9UFN0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.01□□□□□ -2.09
NIPSNAP3AQ9UFN0 HMGN2P32-201ENST00000444648 269 ntBASIC2.01□□□□□ -2.09
NIPSNAP3AQ9UFN0 AC079804.2-201ENST00000490376 200 ntBASIC2.01□□□□□ -2.09
NIPSNAP3AQ9UFN0 AC005840.1-201ENST00000498412 377 ntBASIC2.01□□□□□ -2.09
NIPSNAP3AQ9UFN0 RNU6-197P-201ENST00000516680 100 ntBASIC2.01□□□□□ -2.09
NIPSNAP3AQ9UFN0 SNORD53-201ENST00000579969 78 ntBASIC2.01□□□□□ -2.09
NIPSNAP3AQ9UFN0 MIR4713-201ENST00000582691 75 ntBASIC2.01□□□□□ -2.09
NIPSNAP3AQ9UFN0 AL513423.1-201ENST00000621695 132 ntBASIC2.01□□□□□ -2.09
NIPSNAP3AQ9UFN0 AC064859.1-201ENST00000624741 174 ntBASIC2.01□□□□□ -2.09
NIPSNAP3AQ9UFN0 SNORD3E-202ENST00000627253 216 ntBASIC2.01□□□□□ -2.09
NIPSNAP3AQ9UFN0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.01□□□□□ -2.09
NIPSNAP3AQ9UFN0 Y_RNA.8-201ENST00000362353 102 ntBASIC2□□□□□ -2.09
NIPSNAP3AQ9UFN0 Y_RNA.91-201ENST00000363042 107 ntBASIC2□□□□□ -2.09
NIPSNAP3AQ9UFN0 MIR891A-201ENST00000401237 79 ntBASIC2□□□□□ -2.09
NIPSNAP3AQ9UFN0 RPS27P21-201ENST00000486977 252 ntBASIC2□□□□□ -2.09
NIPSNAP3AQ9UFN0 RNA5SP153-201ENST00000516498 76 ntBASIC2□□□□□ -2.09
NIPSNAP3AQ9UFN0 RNU6-365P-201ENST00000517113 106 ntBASIC2□□□□□ -2.09
NIPSNAP3AQ9UFN0 AC022254.1-201ENST00000567857 235 ntBASIC2□□□□□ -2.09
NIPSNAP3AQ9UFN0 AC027279.3-201ENST00000625055 122 ntBASIC2□□□□□ -2.09
NIPSNAP3AQ9UFN0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
NIPSNAP3AQ9UFN0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
NIPSNAP3AQ9UFN0 RNU4-84P-201ENST00000364200 139 ntBASIC1.99□□□□□ -2.09
NIPSNAP3AQ9UFN0 Y_RNA.272-201ENST00000364696 102 ntBASIC1.99□□□□□ -2.09
NIPSNAP3AQ9UFN0 Y_RNA.634-201ENST00000364811 113 ntBASIC1.99□□□□□ -2.09
NIPSNAP3AQ9UFN0 Y_RNA.336-201ENST00000365307 109 ntBASIC1.99□□□□□ -2.09
NIPSNAP3AQ9UFN0 Y_RNA.464-201ENST00000384282 110 ntBASIC1.99□□□□□ -2.09
NIPSNAP3AQ9UFN0 MIR660-201ENST00000385235 97 ntBASIC1.99□□□□□ -2.09
NIPSNAP3AQ9UFN0 RNU4-53P-201ENST00000410828 140 ntBASIC1.99□□□□□ -2.09
NIPSNAP3AQ9UFN0 RNU6-1135P-201ENST00000411083 103 ntBASIC1.99□□□□□ -2.09
NIPSNAP3AQ9UFN0 RN7SKP192-201ENST00000411291 327 ntBASIC1.99□□□□□ -2.09
NIPSNAP3AQ9UFN0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.99□□□□□ -2.09
NIPSNAP3AQ9UFN0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.99□□□□□ -2.09
NIPSNAP3AQ9UFN0 MIR4778-201ENST00000577635 80 ntBASIC1.99□□□□□ -2.09
NIPSNAP3AQ9UFN0 MIR3945-201ENST00000581853 98 ntBASIC1.99□□□□□ -2.09
NIPSNAP3AQ9UFN0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
NIPSNAP3AQ9UFN0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
NIPSNAP3AQ9UFN0 MIR424-201ENST00000362227 98 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 289.6 ms