Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.56□□□□□ -2
SMPD4Q9NXE4 RNU6-904P-201ENST00000516206 101 ntBASIC2.56□□□□□ -2
SMPD4Q9NXE4 RNY4P20-201ENST00000516678 93 ntBASIC2.56□□□□□ -2
SMPD4Q9NXE4 RNU6-158P-201ENST00000517104 100 ntBASIC2.56□□□□□ -2
SMPD4Q9NXE4 MIR3945-201ENST00000581853 98 ntBASIC2.56□□□□□ -2
SMPD4Q9NXE4 Y_RNA.818-201ENST00000618813 71 ntBASIC2.56□□□□□ -2
SMPD4Q9NXE4 AC134878.1-201ENST00000619901 243 ntBASIC2.56□□□□□ -2
SMPD4Q9NXE4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.56□□□□□ -2
SMPD4Q9NXE4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SMPD4Q9NXE4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.56□□□□□ -2
SMPD4Q9NXE4 AC009487.4-201ENST00000624969 3585 ntBASIC2.56□□□□□ -2
SMPD4Q9NXE4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.55□□□□□ -2
SMPD4Q9NXE4 RNU6-414P-201ENST00000363705 104 ntBASIC2.55□□□□□ -2
SMPD4Q9NXE4 Y_RNA.342-201ENST00000365352 113 ntBASIC2.55□□□□□ -2
SMPD4Q9NXE4 RNU6-820P-201ENST00000384273 107 ntBASIC2.55□□□□□ -2
SMPD4Q9NXE4 MIR518F-201ENST00000384973 87 ntBASIC2.55□□□□□ -2
SMPD4Q9NXE4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.55□□□□□ -2
SMPD4Q9NXE4 SNORD78.1-201ENST00000390866 65 ntBASIC2.55□□□□□ -2
SMPD4Q9NXE4 RPS3AP1-201ENST00000413190 320 ntBASIC2.55□□□□□ -2
SMPD4Q9NXE4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.55□□□□□ -2
SMPD4Q9NXE4 AC234781.5-201ENST00000508429 271 ntBASIC2.55□□□□□ -2
SMPD4Q9NXE4 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.55□□□□□ -2
SMPD4Q9NXE4 RNA5SP24-201ENST00000516478 95 ntBASIC2.55□□□□□ -2
SMPD4Q9NXE4 AC141557.1-201ENST00000540982 400 ntBASIC2.55□□□□□ -2
SMPD4Q9NXE4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
SMPD4Q9NXE4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.55□□□□□ -2
SMPD4Q9NXE4 AC008507.4-201ENST00000585464 127 ntBASIC2.55□□□□□ -2
SMPD4Q9NXE4 SNORD115-40-201ENST00000606510 82 ntBASIC2.55□□□□□ -2
SMPD4Q9NXE4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
SMPD4Q9NXE4 AC064859.1-201ENST00000624741 174 ntBASIC2.55□□□□□ -2
SMPD4Q9NXE4 RNY4P6-201ENST00000363667 96 ntBASIC2.54□□□□□ -2
SMPD4Q9NXE4 Y_RNA.253-201ENST00000364562 112 ntBASIC2.54□□□□□ -2
SMPD4Q9NXE4 AL359511.1-201ENST00000402970 211 ntBASIC2.54□□□□□ -2
SMPD4Q9NXE4 SNORA3.2-201ENST00000408221 125 ntBASIC2.54□□□□□ -2
SMPD4Q9NXE4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.54□□□□□ -2
SMPD4Q9NXE4 RPS26P48-201ENST00000491713 339 ntBASIC2.54□□□□□ -2
SMPD4Q9NXE4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.54□□□□□ -2
SMPD4Q9NXE4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.54□□□□□ -2
SMPD4Q9NXE4 RNU6-693P-201ENST00000516134 107 ntBASIC2.54□□□□□ -2
SMPD4Q9NXE4 IGKV3-31-201ENST00000523109 329 ntBASIC2.54□□□□□ -2
SMPD4Q9NXE4 AC103810.1-201ENST00000579873 453 ntBASIC2.54□□□□□ -2
SMPD4Q9NXE4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.54□□□□□ -2
SMPD4Q9NXE4 MIR1248-201ENST00000629190 106 ntBASIC2.54□□□□□ -2
SMPD4Q9NXE4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SMPD4Q9NXE4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SMPD4Q9NXE4 Y_RNA.78-201ENST00000362970 110 ntBASIC2.53□□□□□ -2
SMPD4Q9NXE4 RNU1-109P-201ENST00000383960 147 ntBASIC2.53□□□□□ -2
SMPD4Q9NXE4 RNU6-1104P-201ENST00000384723 104 ntBASIC2.53□□□□□ -2
SMPD4Q9NXE4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.53□□□□□ -2
SMPD4Q9NXE4 RNU4-53P-201ENST00000410828 140 ntBASIC2.53□□□□□ -2
SMPD4Q9NXE4 RNA5SP225-201ENST00000410874 135 ntBASIC2.53□□□□□ -2
SMPD4Q9NXE4 Y_RNA.621-201ENST00000411065 96 ntBASIC2.53□□□□□ -2
SMPD4Q9NXE4 RNU6-965P-201ENST00000516721 96 ntBASIC2.53□□□□□ -2
SMPD4Q9NXE4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.53□□□□□ -2
SMPD4Q9NXE4 MIR5197-201ENST00000583721 112 ntBASIC2.53□□□□□ -2
SMPD4Q9NXE4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.53□□□□□ -2
SMPD4Q9NXE4 AC046143.2-201ENST00000609789 160 ntBASIC2.53□□□□□ -2
SMPD4Q9NXE4 AC010297.1-201ENST00000623948 149 ntBASIC2.53□□□□□ -2
SMPD4Q9NXE4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SMPD4Q9NXE4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
SMPD4Q9NXE4 MIR6073-201ENST00000352083 89 ntBASIC2.52□□□□□ -2.01
SMPD4Q9NXE4 RNU6-349P-201ENST00000362402 107 ntBASIC2.52□□□□□ -2.01
SMPD4Q9NXE4 RNA5SP456-201ENST00000364002 114 ntBASIC2.52□□□□□ -2.01
SMPD4Q9NXE4 Y_RNA.219-201ENST00000364232 113 ntBASIC2.52□□□□□ -2.01
SMPD4Q9NXE4 DEFA7P-201ENST00000382676 285 ntBASIC2.52□□□□□ -2.01
SMPD4Q9NXE4 Y_RNA.593-201ENST00000410292 98 ntBASIC2.52□□□□□ -2.01
SMPD4Q9NXE4 AC092427.1-202ENST00000430569 476 ntBASIC2.52□□□□□ -2.01
SMPD4Q9NXE4 SNRPGP10-201ENST00000432323 225 ntBASIC2.52□□□□□ -2.01
SMPD4Q9NXE4 AC109327.2-201ENST00000448339 378 ntBASIC2.52□□□□□ -2.01
SMPD4Q9NXE4 HMGN2P18-201ENST00000450680 270 ntBASIC2.52□□□□□ -2.01
SMPD4Q9NXE4 RNA5SP57-201ENST00000459463 123 ntBASIC2.52□□□□□ -2.01
SMPD4Q9NXE4 HMGN1P7-201ENST00000491722 313 ntBASIC2.52□□□□□ -2.01
SMPD4Q9NXE4 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.52□□□□□ -2.01
SMPD4Q9NXE4 AC026421.1-201ENST00000519101 163 ntBASIC2.52□□□□□ -2.01
SMPD4Q9NXE4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.52□□□□□ -2.01
SMPD4Q9NXE4 AC022523.2-201ENST00000561045 150 ntBASIC2.52□□□□□ -2.01
SMPD4Q9NXE4 MIR5092-201ENST00000583139 88 ntBASIC2.52□□□□□ -2.01
SMPD4Q9NXE4 AC073413.2-201ENST00000604332 360 ntBASIC2.52□□□□□ -2.01
SMPD4Q9NXE4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.52□□□□□ -2.01
SMPD4Q9NXE4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SMPD4Q9NXE4 RNU6-228P-201ENST00000362700 106 ntBASIC2.51□□□□□ -2.01
SMPD4Q9NXE4 Y_RNA.466-201ENST00000384294 113 ntBASIC2.51□□□□□ -2.01
SMPD4Q9NXE4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SMPD4Q9NXE4 SNRPGP13-201ENST00000442212 177 ntBASIC2.51□□□□□ -2.01
SMPD4Q9NXE4 PGBD4P5-201ENST00000445958 426 ntBASIC2.51□□□□□ -2.01
SMPD4Q9NXE4 AC107297.1-201ENST00000459991 176 ntBASIC2.51□□□□□ -2.01
SMPD4Q9NXE4 RNU6-1291P-201ENST00000516591 104 ntBASIC2.51□□□□□ -2.01
SMPD4Q9NXE4 RNU7-128P-201ENST00000517247 62 ntBASIC2.51□□□□□ -2.01
SMPD4Q9NXE4 AC084364.2-201ENST00000546924 395 ntBASIC2.51□□□□□ -2.01
SMPD4Q9NXE4 MIR4765-201ENST00000585007 77 ntBASIC2.51□□□□□ -2.01
SMPD4Q9NXE4 U2.20-201ENST00000613956 192 ntBASIC2.51□□□□□ -2.01
SMPD4Q9NXE4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.51□□□□□ -2.01
SMPD4Q9NXE4 AC025521.1-201ENST00000621624 286 ntBASIC2.51□□□□□ -2.01
SMPD4Q9NXE4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SMPD4Q9NXE4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SMPD4Q9NXE4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
SMPD4Q9NXE4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
SMPD4Q9NXE4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.5□□□□□ -2.01
SMPD4Q9NXE4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
SMPD4Q9NXE4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 330.4 ms