Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 Y_RNA.23-201ENST00000362496 106 ntBASIC2.16□□□□□ -2.06
CCM2LQ9NUG4 MIR802-201ENST00000390235 94 ntBASIC2.16□□□□□ -2.06
CCM2LQ9NUG4 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.16□□□□□ -2.06
CCM2LQ9NUG4 RNU2-55P-201ENST00000411146 174 ntBASIC2.16□□□□□ -2.06
CCM2LQ9NUG4 RPL23AP6-201ENST00000446637 472 ntBASIC2.16□□□□□ -2.06
CCM2LQ9NUG4 NDUFA4P2-201ENST00000489989 244 ntBASIC2.16□□□□□ -2.06
CCM2LQ9NUG4 AC079804.2-201ENST00000490376 200 ntBASIC2.16□□□□□ -2.06
CCM2LQ9NUG4 AC090255.1-201ENST00000495779 349 ntBASIC2.16□□□□□ -2.06
CCM2LQ9NUG4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.16□□□□□ -2.06
CCM2LQ9NUG4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.16□□□□□ -2.06
CCM2LQ9NUG4 AL353997.5-201ENST00000618886 171 ntBASIC2.16□□□□□ -2.06
CCM2LQ9NUG4 AP000553.5-201ENST00000641933 54 ntBASIC2.16□□□□□ -2.06
CCM2LQ9NUG4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
CCM2LQ9NUG4 RNU6-312P-201ENST00000364629 107 ntBASIC2.15□□□□□ -2.07
CCM2LQ9NUG4 snoU2-30.1-201ENST00000365012 70 ntBASIC2.15□□□□□ -2.07
CCM2LQ9NUG4 RNU6-1138P-201ENST00000365359 106 ntBASIC2.15□□□□□ -2.07
CCM2LQ9NUG4 RNU6-209P-201ENST00000384118 107 ntBASIC2.15□□□□□ -2.07
CCM2LQ9NUG4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.15□□□□□ -2.07
CCM2LQ9NUG4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CCM2LQ9NUG4 HMGN2P32-201ENST00000444648 269 ntBASIC2.15□□□□□ -2.07
CCM2LQ9NUG4 CYCTP-201ENST00000504253 315 ntBASIC2.15□□□□□ -2.07
CCM2LQ9NUG4 RNA5SP458-201ENST00000516188 119 ntBASIC2.15□□□□□ -2.07
CCM2LQ9NUG4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.15□□□□□ -2.07
CCM2LQ9NUG4 AC022254.1-201ENST00000567857 235 ntBASIC2.15□□□□□ -2.07
CCM2LQ9NUG4 AC008507.4-201ENST00000585464 127 ntBASIC2.15□□□□□ -2.07
CCM2LQ9NUG4 AC120024.3-201ENST00000603167 156 ntBASIC2.15□□□□□ -2.07
CCM2LQ9NUG4 MIR6766-201ENST00000622641 72 ntBASIC2.15□□□□□ -2.07
CCM2LQ9NUG4 AL596028.1-201ENST00000326971 197 ntBASIC2.14□□□□□ -2.07
CCM2LQ9NUG4 MIR15B-201ENST00000385045 98 ntBASIC2.14□□□□□ -2.07
CCM2LQ9NUG4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.14□□□□□ -2.07
CCM2LQ9NUG4 SNORA79-201ENST00000408376 140 ntBASIC2.14□□□□□ -2.07
CCM2LQ9NUG4 AL121914.1-201ENST00000450188 156 ntBASIC2.14□□□□□ -2.07
CCM2LQ9NUG4 AC234781.5-201ENST00000508429 271 ntBASIC2.14□□□□□ -2.07
CCM2LQ9NUG4 RNU7-149P-201ENST00000516739 59 ntBASIC2.14□□□□□ -2.07
CCM2LQ9NUG4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.14□□□□□ -2.07
CCM2LQ9NUG4 MIR1273D-201ENST00000577266 86 ntBASIC2.14□□□□□ -2.07
CCM2LQ9NUG4 MIR4299-201ENST00000577899 72 ntBASIC2.14□□□□□ -2.07
CCM2LQ9NUG4 MIR4713-201ENST00000582691 75 ntBASIC2.14□□□□□ -2.07
CCM2LQ9NUG4 MIR5007-201ENST00000583098 95 ntBASIC2.14□□□□□ -2.07
CCM2LQ9NUG4 AC021506.2-201ENST00000612354 169 ntBASIC2.14□□□□□ -2.07
CCM2LQ9NUG4 AL513423.1-201ENST00000621695 132 ntBASIC2.14□□□□□ -2.07
CCM2LQ9NUG4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCM2LQ9NUG4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.14□□□□□ -2.07
CCM2LQ9NUG4 RNU6-1084P-201ENST00000362498 107 ntBASIC2.13□□□□□ -2.07
CCM2LQ9NUG4 SNORD114-1-201ENST00000362705 72 ntBASIC2.13□□□□□ -2.07
CCM2LQ9NUG4 Y_RNA.150-201ENST00000363562 102 ntBASIC2.13□□□□□ -2.07
CCM2LQ9NUG4 Y_RNA.432-201ENST00000384087 111 ntBASIC2.13□□□□□ -2.07
CCM2LQ9NUG4 RNU6-886P-201ENST00000384319 105 ntBASIC2.13□□□□□ -2.07
CCM2LQ9NUG4 RNU6-424P-201ENST00000384367 105 ntBASIC2.13□□□□□ -2.07
CCM2LQ9NUG4 SNORA26-201ENST00000391286 122 ntBASIC2.13□□□□□ -2.07
CCM2LQ9NUG4 AC005840.1-201ENST00000498412 377 ntBASIC2.13□□□□□ -2.07
CCM2LQ9NUG4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.13□□□□□ -2.07
CCM2LQ9NUG4 RNU6-1299P-201ENST00000516316 100 ntBASIC2.13□□□□□ -2.07
CCM2LQ9NUG4 AC103810.6-201ENST00000606708 136 ntBASIC2.13□□□□□ -2.07
CCM2LQ9NUG4 AC027279.3-201ENST00000625055 122 ntBASIC2.13□□□□□ -2.07
CCM2LQ9NUG4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCM2LQ9NUG4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.12□□□□□ -2.07
CCM2LQ9NUG4 RNU6-661P-201ENST00000362409 107 ntBASIC2.12□□□□□ -2.07
CCM2LQ9NUG4 RNU6-414P-201ENST00000363705 104 ntBASIC2.12□□□□□ -2.07
CCM2LQ9NUG4 SNORD45.3-201ENST00000363836 72 ntBASIC2.12□□□□□ -2.07
CCM2LQ9NUG4 SNORD14E-201ENST00000364009 85 ntBASIC2.12□□□□□ -2.07
CCM2LQ9NUG4 RNU6-163P-201ENST00000384396 106 ntBASIC2.12□□□□□ -2.07
CCM2LQ9NUG4 MIR548I3-201ENST00000408378 149 ntBASIC2.12□□□□□ -2.07
CCM2LQ9NUG4 MIR548I1-201ENST00000408810 149 ntBASIC2.12□□□□□ -2.07
CCM2LQ9NUG4 RNU4-43P-201ENST00000410628 137 ntBASIC2.12□□□□□ -2.07
CCM2LQ9NUG4 Y_RNA.622-201ENST00000411091 108 ntBASIC2.12□□□□□ -2.07
CCM2LQ9NUG4 CALM2P4-201ENST00000430810 426 ntBASIC2.12□□□□□ -2.07
CCM2LQ9NUG4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.12□□□□□ -2.07
CCM2LQ9NUG4 MRPS17P9-201ENST00000511924 393 ntBASIC2.12□□□□□ -2.07
CCM2LQ9NUG4 MIR5002-201ENST00000584713 97 ntBASIC2.12□□□□□ -2.07
CCM2LQ9NUG4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.12□□□□□ -2.07
CCM2LQ9NUG4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.12□□□□□ -2.07
CCM2LQ9NUG4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CCM2LQ9NUG4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCM2LQ9NUG4 Y_RNA.180-201ENST00000363867 113 ntBASIC2.11□□□□□ -2.07
CCM2LQ9NUG4 RNU6-442P-201ENST00000383968 104 ntBASIC2.11□□□□□ -2.07
CCM2LQ9NUG4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CCM2LQ9NUG4 RNA5SP233-201ENST00000459153 113 ntBASIC2.11□□□□□ -2.07
CCM2LQ9NUG4 AC099513.1-201ENST00000490423 301 ntBASIC2.11□□□□□ -2.07
CCM2LQ9NUG4 RNA5SP281-201ENST00000516504 135 ntBASIC2.11□□□□□ -2.07
CCM2LQ9NUG4 RNA5SP168-201ENST00000516642 112 ntBASIC2.11□□□□□ -2.07
CCM2LQ9NUG4 Pinc.1-201ENST00000616452 154 ntBASIC2.11□□□□□ -2.07
CCM2LQ9NUG4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCM2LQ9NUG4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CCM2LQ9NUG4 MIRLET7C-201ENST00000362160 84 ntBASIC2.1□□□□□ -2.07
CCM2LQ9NUG4 Y_RNA.164-201ENST00000363709 102 ntBASIC2.1□□□□□ -2.07
CCM2LQ9NUG4 Y_RNA.336-201ENST00000365307 109 ntBASIC2.1□□□□□ -2.07
CCM2LQ9NUG4 RNU6-484P-201ENST00000384016 107 ntBASIC2.1□□□□□ -2.07
CCM2LQ9NUG4 U8.16-201ENST00000391279 133 ntBASIC2.1□□□□□ -2.07
CCM2LQ9NUG4 PCNPP3-201ENST00000393579 471 ntBASIC2.1□□□□□ -2.07
CCM2LQ9NUG4 HMGN2P38-201ENST00000423806 265 ntBASIC2.1□□□□□ -2.07
CCM2LQ9NUG4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.1□□□□□ -2.07
CCM2LQ9NUG4 PGBD4P5-201ENST00000445958 426 ntBASIC2.1□□□□□ -2.07
CCM2LQ9NUG4 RNU6-717P-201ENST00000459076 104 ntBASIC2.1□□□□□ -2.07
CCM2LQ9NUG4 RNA5SP153-201ENST00000516498 76 ntBASIC2.1□□□□□ -2.07
CCM2LQ9NUG4 SNORD45.4-201ENST00000516629 73 ntBASIC2.1□□□□□ -2.07
CCM2LQ9NUG4 AL160236.1-201ENST00000556317 195 ntBASIC2.1□□□□□ -2.07
CCM2LQ9NUG4 MIR4431-201ENST00000579990 94 ntBASIC2.1□□□□□ -2.07
CCM2LQ9NUG4 MIR6873-201ENST00000622788 63 ntBASIC2.1□□□□□ -2.07
CCM2LQ9NUG4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 203.3 ms