Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 RNU6-561P-201ENST00000516222 102 ntBASIC2.39□□□□□ -2.03
SALL3Q9BXA9 RNA5SP82-201ENST00000516707 92 ntBASIC2.39□□□□□ -2.03
SALL3Q9BXA9 NDUFA5P6-201ENST00000542110 379 ntBASIC2.39□□□□□ -2.03
SALL3Q9BXA9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.39□□□□□ -2.03
SALL3Q9BXA9 AC002984.1-201ENST00000591692 448 ntBASIC2.39□□□□□ -2.03
SALL3Q9BXA9 SNORD14A-201ENST00000606526 91 ntBASIC2.39□□□□□ -2.03
SALL3Q9BXA9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.39□□□□□ -2.03
SALL3Q9BXA9 AP001340.1-201ENST00000624405 217 ntBASIC2.39□□□□□ -2.03
SALL3Q9BXA9 MIR1245B-201ENST00000636115 69 ntBASIC2.39□□□□□ -2.03
SALL3Q9BXA9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
SALL3Q9BXA9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
SALL3Q9BXA9 Y_RNA.118-201ENST00000363300 101 ntBASIC2.38□□□□□ -2.03
SALL3Q9BXA9 U8.6-201ENST00000364939 135 ntBASIC2.38□□□□□ -2.03
SALL3Q9BXA9 RNU6-597P-201ENST00000365620 102 ntBASIC2.38□□□□□ -2.03
SALL3Q9BXA9 Y_RNA.393-201ENST00000383936 102 ntBASIC2.38□□□□□ -2.03
SALL3Q9BXA9 RNU6-1056P-201ENST00000383996 107 ntBASIC2.38□□□□□ -2.03
SALL3Q9BXA9 RNU6-1144P-201ENST00000384247 104 ntBASIC2.38□□□□□ -2.03
SALL3Q9BXA9 RNU6-476P-201ENST00000384726 107 ntBASIC2.38□□□□□ -2.03
SALL3Q9BXA9 RNA5SP511-201ENST00000410487 115 ntBASIC2.38□□□□□ -2.03
SALL3Q9BXA9 RNU6-1064P-201ENST00000410626 104 ntBASIC2.38□□□□□ -2.03
SALL3Q9BXA9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SALL3Q9BXA9 SNRPGP8-201ENST00000454064 226 ntBASIC2.38□□□□□ -2.03
SALL3Q9BXA9 RPL23AP54-201ENST00000495129 419 ntBASIC2.38□□□□□ -2.03
SALL3Q9BXA9 RNU6-1053P-201ENST00000515930 101 ntBASIC2.38□□□□□ -2.03
SALL3Q9BXA9 AC015720.1-201ENST00000565251 277 ntBASIC2.38□□□□□ -2.03
SALL3Q9BXA9 MIR2681-201ENST00000581814 105 ntBASIC2.38□□□□□ -2.03
SALL3Q9BXA9 AC062037.1-201ENST00000605302 128 ntBASIC2.38□□□□□ -2.03
SALL3Q9BXA9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.38□□□□□ -2.03
SALL3Q9BXA9 AL021707.8-201ENST00000609428 183 ntBASIC2.38□□□□□ -2.03
SALL3Q9BXA9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SALL3Q9BXA9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.37□□□□□ -2.03
SALL3Q9BXA9 Y_RNA.332-201ENST00000365271 113 ntBASIC2.37□□□□□ -2.03
SALL3Q9BXA9 RNU6-573P-201ENST00000383938 106 ntBASIC2.37□□□□□ -2.03
SALL3Q9BXA9 RNU6-49P-201ENST00000384256 107 ntBASIC2.37□□□□□ -2.03
SALL3Q9BXA9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SALL3Q9BXA9 SNORA12.1-201ENST00000390873 148 ntBASIC2.37□□□□□ -2.03
SALL3Q9BXA9 SNORA40.5-201ENST00000391061 128 ntBASIC2.37□□□□□ -2.03
SALL3Q9BXA9 RNU2-32P-201ENST00000411193 191 ntBASIC2.37□□□□□ -2.03
SALL3Q9BXA9 AC016909.1-201ENST00000415916 166 ntBASIC2.37□□□□□ -2.03
SALL3Q9BXA9 AC123900.1-201ENST00000420390 96 ntBASIC2.37□□□□□ -2.03
SALL3Q9BXA9 AC090515.1-201ENST00000465295 476 ntBASIC2.37□□□□□ -2.03
SALL3Q9BXA9 SNORA48.11-201ENST00000517015 89 ntBASIC2.37□□□□□ -2.03
SALL3Q9BXA9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.37□□□□□ -2.03
SALL3Q9BXA9 MIR6844-201ENST00000637122 62 ntBASIC2.37□□□□□ -2.03
SALL3Q9BXA9 AC080100.1-201ENST00000624239 5356 ntBASIC2.36□□□□□ -2.03
SALL3Q9BXA9 RNU6-640P-201ENST00000363693 105 ntBASIC2.36□□□□□ -2.03
SALL3Q9BXA9 RNA5SP173-201ENST00000364857 136 ntBASIC2.36□□□□□ -2.03
SALL3Q9BXA9 Y_RNA.466-201ENST00000384294 113 ntBASIC2.36□□□□□ -2.03
SALL3Q9BXA9 RNU6-905P-201ENST00000384434 107 ntBASIC2.36□□□□□ -2.03
SALL3Q9BXA9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.36□□□□□ -2.03
SALL3Q9BXA9 SNORA4.4-201ENST00000515921 135 ntBASIC2.36□□□□□ -2.03
SALL3Q9BXA9 RNU1-40P-201ENST00000516816 164 ntBASIC2.36□□□□□ -2.03
SALL3Q9BXA9 RNU1-97P-201ENST00000516872 164 ntBASIC2.36□□□□□ -2.03
SALL3Q9BXA9 RNA5SP490-201ENST00000517141 136 ntBASIC2.36□□□□□ -2.03
SALL3Q9BXA9 AP003327.1-201ENST00000529684 127 ntBASIC2.36□□□□□ -2.03
SALL3Q9BXA9 MIR378D2-201ENST00000580636 98 ntBASIC2.36□□□□□ -2.03
SALL3Q9BXA9 AL355297.2-201ENST00000604792 129 ntBASIC2.36□□□□□ -2.03
SALL3Q9BXA9 AC245884.12-201ENST00000615364 59 ntBASIC2.36□□□□□ -2.03
SALL3Q9BXA9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SALL3Q9BXA9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
SALL3Q9BXA9 MIR450A1-201ENST00000362262 91 ntBASIC2.35□□□□□ -2.03
SALL3Q9BXA9 MIR337-201ENST00000362281 93 ntBASIC2.35□□□□□ -2.03
SALL3Q9BXA9 RNU1-22P-201ENST00000363334 158 ntBASIC2.35□□□□□ -2.03
SALL3Q9BXA9 Y_RNA.140-201ENST00000363474 103 ntBASIC2.35□□□□□ -2.03
SALL3Q9BXA9 RNU4-13P-201ENST00000364019 141 ntBASIC2.35□□□□□ -2.03
SALL3Q9BXA9 Y_RNA.420-201ENST00000384043 110 ntBASIC2.35□□□□□ -2.03
SALL3Q9BXA9 Y_RNA.508-201ENST00000384502 114 ntBASIC2.35□□□□□ -2.03
SALL3Q9BXA9 Y_RNA.521-201ENST00000384560 114 ntBASIC2.35□□□□□ -2.03
SALL3Q9BXA9 RNU6-768P-201ENST00000384683 107 ntBASIC2.35□□□□□ -2.03
SALL3Q9BXA9 SNORD37.2-201ENST00000391075 66 ntBASIC2.35□□□□□ -2.03
SALL3Q9BXA9 SNORA79-201ENST00000408376 140 ntBASIC2.35□□□□□ -2.03
SALL3Q9BXA9 RNY4P30-201ENST00000410216 95 ntBASIC2.35□□□□□ -2.03
SALL3Q9BXA9 RNU2-48P-201ENST00000410694 191 ntBASIC2.35□□□□□ -2.03
SALL3Q9BXA9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.35□□□□□ -2.03
SALL3Q9BXA9 AC011753.1-201ENST00000451001 220 ntBASIC2.35□□□□□ -2.03
SALL3Q9BXA9 RPS27P22-201ENST00000478056 241 ntBASIC2.35□□□□□ -2.03
SALL3Q9BXA9 RPS29P11-201ENST00000496507 171 ntBASIC2.35□□□□□ -2.03
SALL3Q9BXA9 Y_RNA.694-201ENST00000516677 117 ntBASIC2.35□□□□□ -2.03
SALL3Q9BXA9 SNORD45.3-201ENST00000363836 72 ntBASIC2.34□□□□□ -2.04
SALL3Q9BXA9 SNORA3A-201ENST00000364113 130 ntBASIC2.34□□□□□ -2.04
SALL3Q9BXA9 Y_RNA.294-201ENST00000364916 102 ntBASIC2.34□□□□□ -2.04
SALL3Q9BXA9 MIR561-201ENST00000385216 97 ntBASIC2.34□□□□□ -2.04
SALL3Q9BXA9 SNORA75.5-201ENST00000391291 81 ntBASIC2.34□□□□□ -2.04
SALL3Q9BXA9 AL158823.1-201ENST00000418441 478 ntBASIC2.34□□□□□ -2.04
SALL3Q9BXA9 AC092991.1-201ENST00000477176 376 ntBASIC2.34□□□□□ -2.04
SALL3Q9BXA9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.34□□□□□ -2.04
SALL3Q9BXA9 RNA5SP153-201ENST00000516498 76 ntBASIC2.34□□□□□ -2.04
SALL3Q9BXA9 RNU6-63P-201ENST00000516690 95 ntBASIC2.34□□□□□ -2.04
SALL3Q9BXA9 RNU6-965P-201ENST00000516721 96 ntBASIC2.34□□□□□ -2.04
SALL3Q9BXA9 RNU6-856P-201ENST00000516959 98 ntBASIC2.34□□□□□ -2.04
SALL3Q9BXA9 AC027419.1-201ENST00000522976 328 ntBASIC2.34□□□□□ -2.04
SALL3Q9BXA9 AP000942.3-201ENST00000603702 160 ntBASIC2.34□□□□□ -2.04
SALL3Q9BXA9 U6.73-201ENST00000619194 103 ntBASIC2.34□□□□□ -2.04
SALL3Q9BXA9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.34□□□□□ -2.04
SALL3Q9BXA9 AC008555.8-201ENST00000623602 2168 ntBASIC2.33□□□□□ -2.04
SALL3Q9BXA9 RNU1-96P-201ENST00000364163 162 ntBASIC2.33□□□□□ -2.04
SALL3Q9BXA9 RNU4-41P-201ENST00000364426 143 ntBASIC2.33□□□□□ -2.04
SALL3Q9BXA9 Y_RNA.251-201ENST00000364551 99 ntBASIC2.33□□□□□ -2.04
SALL3Q9BXA9 Y_RNA.495-201ENST00000384435 112 ntBASIC2.33□□□□□ -2.04
SALL3Q9BXA9 SNORA26.2-201ENST00000390922 122 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms