Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 SNORD77.4-201ENST00000516158 81 ntBASIC2.11□□□□□ -2.07
SMOQ99835 MIR3133-201ENST00000583157 78 ntBASIC2.11□□□□□ -2.07
SMOQ99835 MIR8054-201ENST00000620877 86 ntBASIC2.11□□□□□ -2.07
SMOQ99835 SNORA4.2-201ENST00000365313 147 ntBASIC2.1□□□□□ -2.07
SMOQ99835 SNORD116-18-201ENST00000383961 92 ntBASIC2.1□□□□□ -2.07
SMOQ99835 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.1□□□□□ -2.07
SMOQ99835 RNU6-440P-201ENST00000390882 105 ntBASIC2.1□□□□□ -2.07
SMOQ99835 MIR1289-2-201ENST00000408360 111 ntBASIC2.1□□□□□ -2.07
SMOQ99835 RNU4-43P-201ENST00000410628 137 ntBASIC2.1□□□□□ -2.07
SMOQ99835 MLLT10P1-201ENST00000418346 262 ntBASIC2.1□□□□□ -2.07
SMOQ99835 AL603825.1-201ENST00000438481 80 ntBASIC2.1□□□□□ -2.07
SMOQ99835 AL021397.1-201ENST00000451806 248 ntBASIC2.1□□□□□ -2.07
SMOQ99835 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.1□□□□□ -2.07
SMOQ99835 RNU7-149P-201ENST00000516739 59 ntBASIC2.1□□□□□ -2.07
SMOQ99835 MIR4529-201ENST00000578110 78 ntBASIC2.1□□□□□ -2.07
SMOQ99835 MIR7111-201ENST00000619751 72 ntBASIC2.1□□□□□ -2.07
SMOQ99835 ZNF355P-201ENST00000427301 3216 ntBASIC2.1□□□□□ -2.07
SMOQ99835 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SMOQ99835 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SMOQ99835 AL596028.1-201ENST00000326971 197 ntBASIC2.09□□□□□ -2.07
SMOQ99835 RNU6-112P-201ENST00000363599 104 ntBASIC2.09□□□□□ -2.07
SMOQ99835 RNU6-818P-201ENST00000364837 108 ntBASIC2.09□□□□□ -2.07
SMOQ99835 RNU6-746P-201ENST00000384112 109 ntBASIC2.09□□□□□ -2.07
SMOQ99835 MIR522-201ENST00000385071 87 ntBASIC2.09□□□□□ -2.07
SMOQ99835 MIR764-201ENST00000390811 85 ntBASIC2.09□□□□□ -2.07
SMOQ99835 RNU6-239P-201ENST00000390990 99 ntBASIC2.09□□□□□ -2.07
SMOQ99835 Y_RNA.580-201ENST00000391004 95 ntBASIC2.09□□□□□ -2.07
SMOQ99835 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.09□□□□□ -2.07
SMOQ99835 AC006461.1-201ENST00000412637 326 ntBASIC2.09□□□□□ -2.07
SMOQ99835 RNU7-200P-201ENST00000516105 62 ntBASIC2.09□□□□□ -2.07
SMOQ99835 RNU6-346P-201ENST00000516288 111 ntBASIC2.09□□□□□ -2.07
SMOQ99835 RNA5SP437-201ENST00000517249 129 ntBASIC2.09□□□□□ -2.07
SMOQ99835 RNU2-19P-201ENST00000517288 84 ntBASIC2.09□□□□□ -2.07
SMOQ99835 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.09□□□□□ -2.07
SMOQ99835 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SMOQ99835 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
SMOQ99835 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SMOQ99835 SNORD68-201ENST00000363214 84 ntBASIC2.08□□□□□ -2.08
SMOQ99835 Y_RNA.164-201ENST00000363709 102 ntBASIC2.08□□□□□ -2.08
SMOQ99835 Y_RNA.432-201ENST00000384087 111 ntBASIC2.08□□□□□ -2.08
SMOQ99835 RNU6-187P-201ENST00000384139 106 ntBASIC2.08□□□□□ -2.08
SMOQ99835 RNU6-296P-201ENST00000384608 107 ntBASIC2.08□□□□□ -2.08
SMOQ99835 SNORD23.1-201ENST00000408212 104 ntBASIC2.08□□□□□ -2.08
SMOQ99835 AL158823.1-201ENST00000418441 478 ntBASIC2.08□□□□□ -2.08
SMOQ99835 AC069257.2-201ENST00000441819 155 ntBASIC2.08□□□□□ -2.08
SMOQ99835 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.08□□□□□ -2.08
SMOQ99835 AC023449.1-201ENST00000454464 154 ntBASIC2.08□□□□□ -2.08
SMOQ99835 AC025033.1-201ENST00000463883 194 ntBASIC2.08□□□□□ -2.08
SMOQ99835 AC055731.1-201ENST00000474387 401 ntBASIC2.08□□□□□ -2.08
SMOQ99835 AC107027.2-201ENST00000512197 115 ntBASIC2.08□□□□□ -2.08
SMOQ99835 RNU7-121P-201ENST00000516604 62 ntBASIC2.08□□□□□ -2.08
SMOQ99835 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.08□□□□□ -2.08
SMOQ99835 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SMOQ99835 Y_RNA.91-201ENST00000363042 107 ntBASIC2.07□□□□□ -2.08
SMOQ99835 RNU6-1138P-201ENST00000365359 106 ntBASIC2.07□□□□□ -2.08
SMOQ99835 SNORD72-201ENST00000390994 80 ntBASIC2.07□□□□□ -2.08
SMOQ99835 RNU2-55P-201ENST00000411146 174 ntBASIC2.07□□□□□ -2.08
SMOQ99835 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.07□□□□□ -2.08
SMOQ99835 STAG3L5P-204ENST00000443759 179 ntBASIC2.07□□□□□ -2.08
SMOQ99835 OR9P1P-201ENST00000496431 281 ntBASIC2.07□□□□□ -2.08
SMOQ99835 RNA5SP458-201ENST00000516188 119 ntBASIC2.07□□□□□ -2.08
SMOQ99835 RNU6-1299P-201ENST00000516316 100 ntBASIC2.07□□□□□ -2.08
SMOQ99835 Y_RNA.703-201ENST00000516846 111 ntBASIC2.07□□□□□ -2.08
SMOQ99835 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.07□□□□□ -2.08
SMOQ99835 Pinc.1-201ENST00000616452 154 ntBASIC2.07□□□□□ -2.08
SMOQ99835 MIR3658-201ENST00000636291 56 ntBASIC2.07□□□□□ -2.08
SMOQ99835 ZNF702P-202ENST00000434269 1966 ntBASIC2.07□□□□□ -2.08
SMOQ99835 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
SMOQ99835 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SMOQ99835 Y_RNA.265-201ENST00000364677 108 ntBASIC2.06□□□□□ -2.08
SMOQ99835 RNY1P5-201ENST00000383890 115 ntBASIC2.06□□□□□ -2.08
SMOQ99835 MIR520A-201ENST00000384862 85 ntBASIC2.06□□□□□ -2.08
SMOQ99835 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
SMOQ99835 RNU6-131P-201ENST00000391144 107 ntBASIC2.06□□□□□ -2.08
SMOQ99835 RNA5SP100-201ENST00000410903 110 ntBASIC2.06□□□□□ -2.08
SMOQ99835 RNA5SP59-201ENST00000410922 110 ntBASIC2.06□□□□□ -2.08
SMOQ99835 FTH1P12-201ENST00000432137 551 ntBASIC2.06□□□□□ -2.08
SMOQ99835 RPS27P21-201ENST00000486977 252 ntBASIC2.06□□□□□ -2.08
SMOQ99835 RPL23AP63-201ENST00000498752 471 ntBASIC2.06□□□□□ -2.08
SMOQ99835 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.06□□□□□ -2.08
SMOQ99835 MRPS17P9-201ENST00000511924 393 ntBASIC2.06□□□□□ -2.08
SMOQ99835 RNU6-197P-201ENST00000516680 100 ntBASIC2.06□□□□□ -2.08
SMOQ99835 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.06□□□□□ -2.08
SMOQ99835 MIR4762-201ENST00000585261 75 ntBASIC2.06□□□□□ -2.08
SMOQ99835 AC008507.4-201ENST00000585464 127 ntBASIC2.06□□□□□ -2.08
SMOQ99835 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.06□□□□□ -2.08
SMOQ99835 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.06□□□□□ -2.08
SMOQ99835 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SMOQ99835 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SMOQ99835 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SMOQ99835 U8.5-201ENST00000364528 136 ntBASIC2.05□□□□□ -2.08
SMOQ99835 SNORA16B-201ENST00000364674 135 ntBASIC2.05□□□□□ -2.08
SMOQ99835 SNORD50B-201ENST00000364995 70 ntBASIC2.05□□□□□ -2.08
SMOQ99835 RNU6-449P-201ENST00000383914 107 ntBASIC2.05□□□□□ -2.08
SMOQ99835 Y_RNA.486-201ENST00000384398 107 ntBASIC2.05□□□□□ -2.08
SMOQ99835 RNA5SP482-201ENST00000391269 118 ntBASIC2.05□□□□□ -2.08
SMOQ99835 RNU6-717P-201ENST00000459076 104 ntBASIC2.05□□□□□ -2.08
SMOQ99835 MIR514B-201ENST00000516774 80 ntBASIC2.05□□□□□ -2.08
SMOQ99835 AC002984.1-201ENST00000591692 448 ntBASIC2.05□□□□□ -2.08
SMOQ99835 AL353997.5-201ENST00000618886 171 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms