Protein–RNA interactions for Protein: Q96QS3

ARX, Homeobox protein ARX, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARXQ96QS3 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
ARXQ96QS3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
ARXQ96QS3 Y_RNA.242-201ENST00000364473 110 ntBASIC3.57□□□□□ -1.84
ARXQ96QS3 RNU6-484P-201ENST00000384016 107 ntBASIC3.57□□□□□ -1.84
ARXQ96QS3 RNU6-460P-201ENST00000391158 108 ntBASIC3.57□□□□□ -1.84
ARXQ96QS3 RN7SKP179-201ENST00000516126 217 ntBASIC3.57□□□□□ -1.84
ARXQ96QS3 RNU1-142P-201ENST00000516682 145 ntBASIC3.57□□□□□ -1.84
ARXQ96QS3 MIR4648-201ENST00000580107 72 ntBASIC3.57□□□□□ -1.84
ARXQ96QS3 AC073413.2-201ENST00000604332 360 ntBASIC3.57□□□□□ -1.84
ARXQ96QS3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.57□□□□□ -1.84
ARXQ96QS3 Y_RNA.218-201ENST00000364218 104 ntBASIC3.56□□□□□ -1.84
ARXQ96QS3 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.56□□□□□ -1.84
ARXQ96QS3 OR9P1P-201ENST00000496431 281 ntBASIC3.56□□□□□ -1.84
ARXQ96QS3 RNU6-1209P-201ENST00000363655 107 ntBASIC3.55□□□□□ -1.84
ARXQ96QS3 Y_RNA.164-201ENST00000363709 102 ntBASIC3.55□□□□□ -1.84
ARXQ96QS3 Y_RNA.796-201ENST00000364268 102 ntBASIC3.55□□□□□ -1.84
ARXQ96QS3 Y_RNA.799-201ENST00000364992 102 ntBASIC3.55□□□□□ -1.84
ARXQ96QS3 MIR520A-201ENST00000384862 85 ntBASIC3.55□□□□□ -1.84
ARXQ96QS3 SNORD11-201ENST00000459124 84 ntBASIC3.55□□□□□ -1.84
ARXQ96QS3 RNA5SP458-201ENST00000516188 119 ntBASIC3.55□□□□□ -1.84
ARXQ96QS3 Y_RNA.714-201ENST00000517065 90 ntBASIC3.55□□□□□ -1.84
ARXQ96QS3 AC024995.1-201ENST00000523014 93 ntBASIC3.55□□□□□ -1.84
ARXQ96QS3 AC022513.1-201ENST00000624512 117 ntBASIC3.55□□□□□ -1.84
ARXQ96QS3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ARXQ96QS3 Y_RNA.4-201ENST00000362333 112 ntBASIC3.54□□□□□ -1.84
ARXQ96QS3 Y_RNA.261-201ENST00000364631 102 ntBASIC3.54□□□□□ -1.84
ARXQ96QS3 RNU6-915P-201ENST00000364943 103 ntBASIC3.54□□□□□ -1.84
ARXQ96QS3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
ARXQ96QS3 RNA5SP425-201ENST00000410336 112 ntBASIC3.54□□□□□ -1.84
ARXQ96QS3 RNA5SP21-201ENST00000410917 96 ntBASIC3.54□□□□□ -1.84
ARXQ96QS3 AC099677.2-201ENST00000436385 175 ntBASIC3.54□□□□□ -1.84
ARXQ96QS3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.54□□□□□ -1.84
ARXQ96QS3 MRPS17P9-201ENST00000511924 393 ntBASIC3.54□□□□□ -1.84
ARXQ96QS3 AC096725.1-201ENST00000514266 313 ntBASIC3.54□□□□□ -1.84
ARXQ96QS3 MIR514B-201ENST00000516774 80 ntBASIC3.54□□□□□ -1.84
ARXQ96QS3 SUB1P4-201ENST00000566062 339 ntBASIC3.54□□□□□ -1.84
ARXQ96QS3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.54□□□□□ -1.84
ARXQ96QS3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ARXQ96QS3 AC018630.2-201ENST00000534866 2403 ntBASIC3.53□□□□□ -1.84
ARXQ96QS3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
ARXQ96QS3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
ARXQ96QS3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.53□□□□□ -1.84
ARXQ96QS3 Y_RNA.81-201ENST00000362997 102 ntBASIC3.53□□□□□ -1.84
ARXQ96QS3 RNU6-978P-201ENST00000364371 103 ntBASIC3.53□□□□□ -1.84
ARXQ96QS3 RNU6-1138P-201ENST00000365359 106 ntBASIC3.53□□□□□ -1.84
ARXQ96QS3 SNORD18B-201ENST00000365659 72 ntBASIC3.53□□□□□ -1.84
ARXQ96QS3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
ARXQ96QS3 HMGN2P19-201ENST00000425149 265 ntBASIC3.53□□□□□ -1.84
ARXQ96QS3 Pinc.1-201ENST00000616452 154 ntBASIC3.53□□□□□ -1.84
ARXQ96QS3 CTSLP2-204ENST00000629029 392 ntBASIC3.53□□□□□ -1.84
ARXQ96QS3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
ARXQ96QS3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ARXQ96QS3 Y_RNA.251-201ENST00000364551 99 ntBASIC3.52□□□□□ -1.85
ARXQ96QS3 Y_RNA.634-201ENST00000364811 113 ntBASIC3.52□□□□□ -1.85
ARXQ96QS3 MIR512-1-201ENST00000384913 84 ntBASIC3.52□□□□□ -1.85
ARXQ96QS3 AL117342.1-201ENST00000404861 406 ntBASIC3.52□□□□□ -1.85
ARXQ96QS3 AL356379.1-201ENST00000414105 126 ntBASIC3.52□□□□□ -1.85
ARXQ96QS3 AC233266.1-201ENST00000454518 96 ntBASIC3.52□□□□□ -1.85
ARXQ96QS3 RNU7-94P-201ENST00000459576 63 ntBASIC3.52□□□□□ -1.85
ARXQ96QS3 RNU6-1234P-201ENST00000516877 103 ntBASIC3.52□□□□□ -1.85
ARXQ96QS3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC3.52□□□□□ -1.85
ARXQ96QS3 ZNF861P-201ENST00000588126 639 ntBASIC3.52□□□□□ -1.85
ARXQ96QS3 AC097639.2-201ENST00000603159 172 ntBASIC3.52□□□□□ -1.85
ARXQ96QS3 AC242852.1-201ENST00000612151 96 ntBASIC3.52□□□□□ -1.85
ARXQ96QS3 AC244015.1-201ENST00000622301 99 ntBASIC3.52□□□□□ -1.85
ARXQ96QS3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ARXQ96QS3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ARXQ96QS3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ARXQ96QS3 RNA5SP289-201ENST00000362332 137 ntBASIC3.51□□□□□ -1.85
ARXQ96QS3 RNU6-834P-201ENST00000362367 110 ntBASIC3.51□□□□□ -1.85
ARXQ96QS3 RNU6-1082P-201ENST00000364574 107 ntBASIC3.51□□□□□ -1.85
ARXQ96QS3 RNU4-53P-201ENST00000410828 140 ntBASIC3.51□□□□□ -1.85
ARXQ96QS3 Y_RNA.692-201ENST00000516627 105 ntBASIC3.51□□□□□ -1.85
ARXQ96QS3 RNU7-149P-201ENST00000516739 59 ntBASIC3.51□□□□□ -1.85
ARXQ96QS3 RNU6-365P-201ENST00000517113 106 ntBASIC3.51□□□□□ -1.85
ARXQ96QS3 AC090049.2-201ENST00000550377 109 ntBASIC3.51□□□□□ -1.85
ARXQ96QS3 MIR4713-201ENST00000582691 75 ntBASIC3.51□□□□□ -1.85
ARXQ96QS3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.5□□□□□ -1.85
ARXQ96QS3 Y_RNA.226-201ENST00000364337 114 ntBASIC3.5□□□□□ -1.85
ARXQ96QS3 Y_RNA.353-201ENST00000365440 108 ntBASIC3.5□□□□□ -1.85
ARXQ96QS3 MIR676-201ENST00000390702 67 ntBASIC3.5□□□□□ -1.85
ARXQ96QS3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC3.5□□□□□ -1.85
ARXQ96QS3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.5□□□□□ -1.85
ARXQ96QS3 HMGN1P7-201ENST00000491722 313 ntBASIC3.5□□□□□ -1.85
ARXQ96QS3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.5□□□□□ -1.85
ARXQ96QS3 AL358944.1-201ENST00000528537 144 ntBASIC3.5□□□□□ -1.85
ARXQ96QS3 AC084364.2-201ENST00000546924 395 ntBASIC3.5□□□□□ -1.85
ARXQ96QS3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.5□□□□□ -1.85
ARXQ96QS3 AC131055.1-201ENST00000584626 316 ntBASIC3.5□□□□□ -1.85
ARXQ96QS3 AL353997.5-201ENST00000618886 171 ntBASIC3.5□□□□□ -1.85
ARXQ96QS3 AC080100.1-201ENST00000624239 5356 ntBASIC3.5□□□□□ -1.85
ARXQ96QS3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ARXQ96QS3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.49□□□□□ -1.85
ARXQ96QS3 Y_RNA.120-201ENST00000363304 110 ntBASIC3.49□□□□□ -1.85
ARXQ96QS3 RNA5SP100-201ENST00000410903 110 ntBASIC3.49□□□□□ -1.85
ARXQ96QS3 RNA5SP59-201ENST00000410922 110 ntBASIC3.49□□□□□ -1.85
ARXQ96QS3 Y_RNA.686-201ENST00000516548 134 ntBASIC3.49□□□□□ -1.85
ARXQ96QS3 RNU6-341P-201ENST00000516973 96 ntBASIC3.49□□□□□ -1.85
ARXQ96QS3 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.49□□□□□ -1.85
ARXQ96QS3 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms