Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 SNORA48.11-201ENST00000517015 89 ntBASIC3.03□□□□□ -1.92
SYNGAP1Q96PV0 RNU6-537P-201ENST00000517277 103 ntBASIC3.03□□□□□ -1.92
SYNGAP1Q96PV0 uc_338.28-201ENST00000612082 187 ntBASIC3.03□□□□□ -1.92
SYNGAP1Q96PV0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
SYNGAP1Q96PV0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
SYNGAP1Q96PV0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SYNGAP1Q96PV0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.03□□□□□ -1.92
SYNGAP1Q96PV0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
SYNGAP1Q96PV0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.02□□□□□ -1.93
SYNGAP1Q96PV0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SYNGAP1Q96PV0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SYNGAP1Q96PV0 SNORA68.1-201ENST00000364537 132 ntBASIC3.02□□□□□ -1.93
SYNGAP1Q96PV0 SNORA8-201ENST00000384574 139 ntBASIC3.02□□□□□ -1.93
SYNGAP1Q96PV0 RN7SL499P-201ENST00000481141 276 ntBASIC3.02□□□□□ -1.93
SYNGAP1Q96PV0 RNU6-1149P-201ENST00000516810 97 ntBASIC3.02□□□□□ -1.93
SYNGAP1Q96PV0 SNORA31.26-201ENST00000517250 137 ntBASIC3.02□□□□□ -1.93
SYNGAP1Q96PV0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.02□□□□□ -1.93
SYNGAP1Q96PV0 AL356280.1-201ENST00000603614 379 ntBASIC3.02□□□□□ -1.93
SYNGAP1Q96PV0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SYNGAP1Q96PV0 MAPK10-322ENST00000641485 4530 ntBASIC3.02□□□□□ -1.93
SYNGAP1Q96PV0 AC018630.2-201ENST00000534866 2403 ntBASIC3.02□□□□□ -1.93
SYNGAP1Q96PV0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.01□□□□□ -1.93
SYNGAP1Q96PV0 MIR340-201ENST00000362125 95 ntBASIC3.01□□□□□ -1.93
SYNGAP1Q96PV0 SNORD68-201ENST00000363214 84 ntBASIC3.01□□□□□ -1.93
SYNGAP1Q96PV0 RNA5SP125-201ENST00000364843 120 ntBASIC3.01□□□□□ -1.93
SYNGAP1Q96PV0 AC011753.1-201ENST00000451001 220 ntBASIC3.01□□□□□ -1.93
SYNGAP1Q96PV0 AL049830.1-201ENST00000468034 425 ntBASIC3.01□□□□□ -1.93
SYNGAP1Q96PV0 IGKV1-22-201ENST00000524313 326 ntBASIC3.01□□□□□ -1.93
SYNGAP1Q96PV0 MIR3605-201ENST00000583214 100 ntBASIC3.01□□□□□ -1.93
SYNGAP1Q96PV0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.01□□□□□ -1.93
SYNGAP1Q96PV0 CTSLP2-204ENST00000629029 392 ntBASIC3.01□□□□□ -1.93
SYNGAP1Q96PV0 MIR6733-201ENST00000635723 61 ntBASIC3.01□□□□□ -1.93
SYNGAP1Q96PV0 MIR4679-1-201ENST00000637619 75 ntBASIC3.01□□□□□ -1.93
SYNGAP1Q96PV0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SYNGAP1Q96PV0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SYNGAP1Q96PV0 RNU6-1084P-201ENST00000362498 107 ntBASIC3□□□□□ -1.93
SYNGAP1Q96PV0 Y_RNA.309-201ENST00000365046 111 ntBASIC3□□□□□ -1.93
SYNGAP1Q96PV0 Y_RNA.495-201ENST00000384435 112 ntBASIC3□□□□□ -1.93
SYNGAP1Q96PV0 SNRPGP13-201ENST00000442212 177 ntBASIC3□□□□□ -1.93
SYNGAP1Q96PV0 RN7SL297P-201ENST00000483161 293 ntBASIC3□□□□□ -1.93
SYNGAP1Q96PV0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3□□□□□ -1.93
SYNGAP1Q96PV0 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3□□□□□ -1.93
SYNGAP1Q96PV0 AC008507.4-201ENST00000585464 127 ntBASIC3□□□□□ -1.93
SYNGAP1Q96PV0 AL591926.4-201ENST00000616895 298 ntBASIC3□□□□□ -1.93
SYNGAP1Q96PV0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
SYNGAP1Q96PV0 ZNF271P-202ENST00000465539 1970 ntBASIC3□□□□□ -1.93
SYNGAP1Q96PV0 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3□□□□□ -1.93
SYNGAP1Q96PV0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
SYNGAP1Q96PV0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SYNGAP1Q96PV0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SYNGAP1Q96PV0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SYNGAP1Q96PV0 RNU6-32P-201ENST00000383948 107 ntBASIC2.99□□□□□ -1.93
SYNGAP1Q96PV0 RNU6-13P-201ENST00000384248 107 ntBASIC2.99□□□□□ -1.93
SYNGAP1Q96PV0 RNU6-12P-201ENST00000384604 107 ntBASIC2.99□□□□□ -1.93
SYNGAP1Q96PV0 RNU6-41P-201ENST00000384741 107 ntBASIC2.99□□□□□ -1.93
SYNGAP1Q96PV0 MIR95-201ENST00000385072 81 ntBASIC2.99□□□□□ -1.93
SYNGAP1Q96PV0 RNY4P30-201ENST00000410216 95 ntBASIC2.99□□□□□ -1.93
SYNGAP1Q96PV0 RN7SKP223-201ENST00000410582 62 ntBASIC2.99□□□□□ -1.93
SYNGAP1Q96PV0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.99□□□□□ -1.93
SYNGAP1Q96PV0 RNU6-412P-201ENST00000516434 106 ntBASIC2.99□□□□□ -1.93
SYNGAP1Q96PV0 RNU6-341P-201ENST00000516973 96 ntBASIC2.99□□□□□ -1.93
SYNGAP1Q96PV0 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.99□□□□□ -1.93
SYNGAP1Q96PV0 MIR338-201ENST00000636369 67 ntBASIC2.99□□□□□ -1.93
SYNGAP1Q96PV0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SYNGAP1Q96PV0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.99□□□□□ -1.93
SYNGAP1Q96PV0 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.99□□□□□ -1.93
SYNGAP1Q96PV0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SYNGAP1Q96PV0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SYNGAP1Q96PV0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SYNGAP1Q96PV0 SNORD114-1-201ENST00000362705 72 ntBASIC2.98□□□□□ -1.93
SYNGAP1Q96PV0 RNU6-888P-201ENST00000363010 101 ntBASIC2.98□□□□□ -1.93
SYNGAP1Q96PV0 SNORA33-201ENST00000363664 130 ntBASIC2.98□□□□□ -1.93
SYNGAP1Q96PV0 RNU6-1292P-201ENST00000383856 107 ntBASIC2.98□□□□□ -1.93
SYNGAP1Q96PV0 AL117342.1-201ENST00000404861 406 ntBASIC2.98□□□□□ -1.93
SYNGAP1Q96PV0 RNU2-48P-201ENST00000410694 191 ntBASIC2.98□□□□□ -1.93
SYNGAP1Q96PV0 AC104332.2-201ENST00000429959 156 ntBASIC2.98□□□□□ -1.93
SYNGAP1Q96PV0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.98□□□□□ -1.93
SYNGAP1Q96PV0 AL137067.1-201ENST00000615933 120 ntBASIC2.98□□□□□ -1.93
SYNGAP1Q96PV0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.98□□□□□ -1.93
SYNGAP1Q96PV0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SYNGAP1Q96PV0 MIR337-201ENST00000362281 93 ntBASIC2.97□□□□□ -1.93
SYNGAP1Q96PV0 Y_RNA.242-201ENST00000364473 110 ntBASIC2.97□□□□□ -1.93
SYNGAP1Q96PV0 Y_RNA.366-201ENST00000365540 102 ntBASIC2.97□□□□□ -1.93
SYNGAP1Q96PV0 SNORD24-201ENST00000383884 75 ntBASIC2.97□□□□□ -1.93
SYNGAP1Q96PV0 MIRLET7F2-201ENST00000385277 83 ntBASIC2.97□□□□□ -1.93
SYNGAP1Q96PV0 SNORD77.3-201ENST00000391113 65 ntBASIC2.97□□□□□ -1.93
SYNGAP1Q96PV0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.97□□□□□ -1.93
SYNGAP1Q96PV0 ATP5J2P3-201ENST00000451550 258 ntBASIC2.97□□□□□ -1.93
SYNGAP1Q96PV0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.97□□□□□ -1.93
SYNGAP1Q96PV0 RNU7-128P-201ENST00000517247 62 ntBASIC2.97□□□□□ -1.93
SYNGAP1Q96PV0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SYNGAP1Q96PV0 SNORA1B-201ENST00000362535 133 ntBASIC2.96□□□□□ -1.93
SYNGAP1Q96PV0 SNORD114-6-201ENST00000364393 72 ntBASIC2.96□□□□□ -1.93
SYNGAP1Q96PV0 RNU6-220P-201ENST00000390919 107 ntBASIC2.96□□□□□ -1.93
SYNGAP1Q96PV0 Y_RNA.677-201ENST00000516401 85 ntBASIC2.96□□□□□ -1.93
SYNGAP1Q96PV0 RNU7-70P-201ENST00000516941 66 ntBASIC2.96□□□□□ -1.93
SYNGAP1Q96PV0 AC007012.1-201ENST00000567192 175 ntBASIC2.96□□□□□ -1.93
SYNGAP1Q96PV0 Y_RNA.140-201ENST00000363474 103 ntBASIC2.95□□□□□ -1.94
SYNGAP1Q96PV0 RNU6-1072P-201ENST00000384703 107 ntBASIC2.95□□□□□ -1.94
SYNGAP1Q96PV0 RNU6-443P-201ENST00000384780 107 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms