Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RNU6-143P-201ENST00000516942 93 ntBASIC-1.88□□□□□ -2.71
CFAP54Q96N23 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.89□□□□□ -2.71
CFAP54Q96N23 SNORD38C-201ENST00000384381 69 ntBASIC-1.89□□□□□ -2.71
CFAP54Q96N23 MTCYBP2-201ENST00000407745 171 ntBASIC-1.89□□□□□ -2.71
CFAP54Q96N23 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-1.89□□□□□ -2.71
CFAP54Q96N23 MTND1P7-201ENST00000632801 297 ntBASIC-1.89□□□□□ -2.71
CFAP54Q96N23 Y_RNA.372-201ENST00000365599 102 ntBASIC-1.89□□□□□ -2.71
CFAP54Q96N23 MIR539-201ENST00000365690 78 ntBASIC-1.89□□□□□ -2.71
CFAP54Q96N23 RNU6-637P-201ENST00000384050 107 ntBASIC-1.89□□□□□ -2.71
CFAP54Q96N23 RNU6-476P-201ENST00000384726 107 ntBASIC-1.89□□□□□ -2.71
CFAP54Q96N23 AC018880.2-201ENST00000414265 201 ntBASIC-1.89□□□□□ -2.71
CFAP54Q96N23 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-1.89□□□□□ -2.71
CFAP54Q96N23 RNA5SP454-201ENST00000517231 127 ntBASIC-1.89□□□□□ -2.71
CFAP54Q96N23 AC068339.1-201ENST00000526965 141 ntBASIC-1.89□□□□□ -2.71
CFAP54Q96N23 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1.89□□□□□ -2.71
CFAP54Q96N23 PART1_1.1-201ENST00000611761 217 ntBASIC-1.89□□□□□ -2.71
CFAP54Q96N23 AC005520.5-201ENST00000613926 164 ntBASIC-1.89□□□□□ -2.71
CFAP54Q96N23 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.89□□□□□ -2.71
CFAP54Q96N23 RNU6-166P-201ENST00000384371 107 ntBASIC-1.89□□□□□ -2.71
CFAP54Q96N23 MIR570-201ENST00000384917 97 ntBASIC-1.89□□□□□ -2.71
CFAP54Q96N23 RNA5SP201-201ENST00000410316 124 ntBASIC-1.89□□□□□ -2.71
CFAP54Q96N23 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-1.89□□□□□ -2.71
CFAP54Q96N23 RNU4-10P-201ENST00000364383 140 ntBASIC-1.9□□□□□ -2.71
CFAP54Q96N23 RNU5E-6P-201ENST00000365574 115 ntBASIC-1.9□□□□□ -2.71
CFAP54Q96N23 MIR548H3-201ENST00000408771 118 ntBASIC-1.9□□□□□ -2.71
CFAP54Q96N23 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.9□□□□□ -2.71
CFAP54Q96N23 MTND4P25-201ENST00000441039 533 ntBASIC-1.9□□□□□ -2.71
CFAP54Q96N23 AC244090.1-201ENST00000441884 93 ntBASIC-1.9□□□□□ -2.71
CFAP54Q96N23 VN1R10P-201ENST00000447106 875 ntBASIC-1.9□□□□□ -2.71
CFAP54Q96N23 AC069113.1-201ENST00000517763 267 ntBASIC-1.9□□□□□ -2.71
CFAP54Q96N23 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.9□□□□□ -2.71
CFAP54Q96N23 AC093783.1-201ENST00000612976 329 ntBASIC-1.9□□□□□ -2.71
CFAP54Q96N23 SNORD68-201ENST00000363214 84 ntBASIC-1.91□□□□□ -2.71
CFAP54Q96N23 RNU6-708P-201ENST00000384217 107 ntBASIC-1.91□□□□□ -2.71
CFAP54Q96N23 RNU6-378P-201ENST00000384324 107 ntBASIC-1.91□□□□□ -2.71
CFAP54Q96N23 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.91□□□□□ -2.71
CFAP54Q96N23 MIR1305-201ENST00000408300 86 ntBASIC-1.91□□□□□ -2.71
CFAP54Q96N23 RNU4-20P-201ENST00000365601 151 ntBASIC-1.91□□□□□ -2.72
CFAP54Q96N23 UBE2V1P11-201ENST00000411559 285 ntBASIC-1.91□□□□□ -2.72
CFAP54Q96N23 MTND1P21-201ENST00000412991 285 ntBASIC-1.91□□□□□ -2.72
CFAP54Q96N23 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-1.91□□□□□ -2.72
CFAP54Q96N23 MIR548AE1-201ENST00000583292 70 ntBASIC-1.91□□□□□ -2.72
CFAP54Q96N23 MIR376A2-201ENST00000636782 80 ntBASIC-1.91□□□□□ -2.72
CFAP54Q96N23 Y_RNA.623-201ENST00000411128 95 ntBASIC-1.92□□□□□ -2.72
CFAP54Q96N23 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.92□□□□□ -2.72
CFAP54Q96N23 AL138960.2-201ENST00000625145 535 ntBASIC-1.92□□□□□ -2.72
CFAP54Q96N23 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.92□□□□□ -2.72
CFAP54Q96N23 FGF7P6-202ENST00000451282 293 ntBASIC-1.92□□□□□ -2.72
CFAP54Q96N23 RNU6-323P-201ENST00000521915 107 ntBASIC-1.92□□□□□ -2.72
CFAP54Q96N23 MIR4491-201ENST00000581087 68 ntBASIC-1.92□□□□□ -2.72
CFAP54Q96N23 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.92□□□□□ -2.72
CFAP54Q96N23 RPL22P17-201ENST00000438729 315 ntBASIC-1.92□□□□□ -2.72
CFAP54Q96N23 EIF1AXP2-201ENST00000555940 413 ntBASIC-1.92□□□□□ -2.72
CFAP54Q96N23 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.92□□□□□ -2.72
CFAP54Q96N23 YWHAEP2-201ENST00000580066 112 ntBASIC-1.92□□□□□ -2.72
CFAP54Q96N23 AC005771.1-201ENST00000585581 349 ntBASIC-1.92□□□□□ -2.72
CFAP54Q96N23 RNU6-90P-201ENST00000606352 106 ntBASIC-1.92□□□□□ -2.72
CFAP54Q96N23 AF250324.2-201ENST00000608299 610 ntBASIC-1.92□□□□□ -2.72
CFAP54Q96N23 RNU6-208P-201ENST00000362431 107 ntBASIC-1.93□□□□□ -2.72
CFAP54Q96N23 RNU5E-7P-201ENST00000365290 117 ntBASIC-1.93□□□□□ -2.72
CFAP54Q96N23 PMCHL1-202ENST00000423102 261 ntBASIC-1.93□□□□□ -2.72
CFAP54Q96N23 RNA5SP106-201ENST00000517274 100 ntBASIC-1.93□□□□□ -2.72
CFAP54Q96N23 AC022893.3-201ENST00000607665 437 ntBASIC-1.93□□□□□ -2.72
CFAP54Q96N23 AC092608.3-201ENST00000625017 386 ntBASIC-1.93□□□□□ -2.72
CFAP54Q96N23 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.93□□□□□ -2.72
CFAP54Q96N23 SNORA72.6-201ENST00000384520 129 ntBASIC-1.93□□□□□ -2.72
CFAP54Q96N23 Y_RNA.548-201ENST00000384656 105 ntBASIC-1.93□□□□□ -2.72
CFAP54Q96N23 MTND1P33-201ENST00000446251 917 ntBASIC-1.93□□□□□ -2.72
CFAP54Q96N23 MTND3P4-201ENST00000453537 303 ntBASIC-1.93□□□□□ -2.72
CFAP54Q96N23 RNU7-57P-201ENST00000459540 60 ntBASIC-1.93□□□□□ -2.72
CFAP54Q96N23 MTND1P8-201ENST00000571424 950 ntBASIC-1.93□□□□□ -2.72
CFAP54Q96N23 MIR4438-201ENST00000585271 93 ntBASIC-1.93□□□□□ -2.72
CFAP54Q96N23 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.94□□□□□ -2.72
CFAP54Q96N23 SNORD115-15-201ENST00000364809 81 ntBASIC-1.94□□□□□ -2.72
CFAP54Q96N23 MIR30D-201ENST00000362283 70 ntBASIC-1.94□□□□□ -2.72
CFAP54Q96N23 RNU7-13P-201ENST00000516413 62 ntBASIC-1.94□□□□□ -2.72
CFAP54Q96N23 U6.107-201ENST00000637108 79 ntBASIC-1.94□□□□□ -2.72
CFAP54Q96N23 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.94□□□□□ -2.72
CFAP54Q96N23 RNU6-592P-201ENST00000411333 103 ntBASIC-1.94□□□□□ -2.72
CFAP54Q96N23 AC004866.1-201ENST00000411748 78 ntBASIC-1.94□□□□□ -2.72
CFAP54Q96N23 snoU13.8-201ENST00000458890 104 ntBASIC-1.94□□□□□ -2.72
CFAP54Q96N23 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.94□□□□□ -2.72
CFAP54Q96N23 MIR4308-201ENST00000580634 81 ntBASIC-1.94□□□□□ -2.72
CFAP54Q96N23 MIR3123-201ENST00000583417 75 ntBASIC-1.94□□□□□ -2.72
CFAP54Q96N23 U6.73-201ENST00000619194 103 ntBASIC-1.94□□□□□ -2.72
CFAP54Q96N23 snoZ196.1-201ENST00000625269 89 ntBASIC-1.94□□□□□ -2.72
CFAP54Q96N23 AC091948.2-201ENST00000636510 279 ntBASIC-1.94□□□□□ -2.72
CFAP54Q96N23 RNA5SP26-201ENST00000362406 119 ntBASIC-1.95□□□□□ -2.72
CFAP54Q96N23 RNU6-223P-201ENST00000362830 107 ntBASIC-1.95□□□□□ -2.72
CFAP54Q96N23 RNU6-695P-201ENST00000391157 104 ntBASIC-1.95□□□□□ -2.72
CFAP54Q96N23 NDUFA5P7-201ENST00000452914 242 ntBASIC-1.95□□□□□ -2.72
CFAP54Q96N23 RNU6-397P-201ENST00000516226 104 ntBASIC-1.95□□□□□ -2.72
CFAP54Q96N23 MIR5693-201ENST00000577722 73 ntBASIC-1.95□□□□□ -2.72
CFAP54Q96N23 AC069503.3-201ENST00000618674 145 ntBASIC-1.95□□□□□ -2.72
CFAP54Q96N23 RNU6-855P-201ENST00000410395 104 ntBASIC-1.95□□□□□ -2.72
CFAP54Q96N23 AL358944.1-201ENST00000528537 144 ntBASIC-1.95□□□□□ -2.72
CFAP54Q96N23 AC005776.1-201ENST00000603164 290 ntBASIC-1.95□□□□□ -2.72
CFAP54Q96N23 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.96□□□□□ -2.72
CFAP54Q96N23 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.96□□□□□ -2.72
CFAP54Q96N23 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.96□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms