Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 AC009831.4-201ENST00000620744 325 ntBASIC2.16□□□□□ -2.06
PTCD3Q96EY7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.16□□□□□ -2.06
PTCD3Q96EY7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.16□□□□□ -2.06
PTCD3Q96EY7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PTCD3Q96EY7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
PTCD3Q96EY7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PTCD3Q96EY7 SNORA3A-201ENST00000364113 130 ntBASIC2.15□□□□□ -2.07
PTCD3Q96EY7 Y_RNA.218-201ENST00000364218 104 ntBASIC2.15□□□□□ -2.07
PTCD3Q96EY7 RNA5SP160-201ENST00000364866 120 ntBASIC2.15□□□□□ -2.07
PTCD3Q96EY7 RNA5SP126-201ENST00000365092 109 ntBASIC2.15□□□□□ -2.07
PTCD3Q96EY7 SNORD72-201ENST00000390994 80 ntBASIC2.15□□□□□ -2.07
PTCD3Q96EY7 RNU6-479P-201ENST00000516348 105 ntBASIC2.15□□□□□ -2.07
PTCD3Q96EY7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.15□□□□□ -2.07
PTCD3Q96EY7 MIR548AI-201ENST00000579940 88 ntBASIC2.15□□□□□ -2.07
PTCD3Q96EY7 SNORD53-201ENST00000579969 78 ntBASIC2.15□□□□□ -2.07
PTCD3Q96EY7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.15□□□□□ -2.07
PTCD3Q96EY7 AP001340.1-201ENST00000624405 217 ntBASIC2.15□□□□□ -2.07
PTCD3Q96EY7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
PTCD3Q96EY7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PTCD3Q96EY7 MIR126-201ENST00000362291 85 ntBASIC2.14□□□□□ -2.07
PTCD3Q96EY7 RNU4-82P-201ENST00000362443 140 ntBASIC2.14□□□□□ -2.07
PTCD3Q96EY7 Y_RNA.66-201ENST00000362862 102 ntBASIC2.14□□□□□ -2.07
PTCD3Q96EY7 RNU4-52P-201ENST00000384209 138 ntBASIC2.14□□□□□ -2.07
PTCD3Q96EY7 RNU6-1081P-201ENST00000384537 107 ntBASIC2.14□□□□□ -2.07
PTCD3Q96EY7 SNORA22C-201ENST00000384614 134 ntBASIC2.14□□□□□ -2.07
PTCD3Q96EY7 MIR522-201ENST00000385071 87 ntBASIC2.14□□□□□ -2.07
PTCD3Q96EY7 MIR221-201ENST00000385135 110 ntBASIC2.14□□□□□ -2.07
PTCD3Q96EY7 MIR29C-201ENST00000385231 88 ntBASIC2.14□□□□□ -2.07
PTCD3Q96EY7 RNU6-1168P-201ENST00000390831 104 ntBASIC2.14□□□□□ -2.07
PTCD3Q96EY7 MIR1283-2-201ENST00000408621 87 ntBASIC2.14□□□□□ -2.07
PTCD3Q96EY7 RNU2-51P-201ENST00000410708 197 ntBASIC2.14□□□□□ -2.07
PTCD3Q96EY7 AC245047.4-201ENST00000433189 144 ntBASIC2.14□□□□□ -2.07
PTCD3Q96EY7 AC025033.1-201ENST00000463883 194 ntBASIC2.14□□□□□ -2.07
PTCD3Q96EY7 AL049830.1-201ENST00000468034 425 ntBASIC2.14□□□□□ -2.07
PTCD3Q96EY7 RNA5SP200-201ENST00000516360 103 ntBASIC2.14□□□□□ -2.07
PTCD3Q96EY7 RNA5SP137-201ENST00000516833 135 ntBASIC2.14□□□□□ -2.07
PTCD3Q96EY7 AP002004.2-201ENST00000531656 154 ntBASIC2.14□□□□□ -2.07
PTCD3Q96EY7 MIR4448-201ENST00000584360 86 ntBASIC2.14□□□□□ -2.07
PTCD3Q96EY7 AC008507.4-201ENST00000585464 127 ntBASIC2.14□□□□□ -2.07
PTCD3Q96EY7 MIR6132-201ENST00000622083 109 ntBASIC2.14□□□□□ -2.07
PTCD3Q96EY7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PTCD3Q96EY7 Y_RNA.71-201ENST00000362892 104 ntBASIC2.13□□□□□ -2.07
PTCD3Q96EY7 SNORA25.7-201ENST00000364375 127 ntBASIC2.13□□□□□ -2.07
PTCD3Q96EY7 MIR597-201ENST00000384968 97 ntBASIC2.13□□□□□ -2.07
PTCD3Q96EY7 RNA5SP109-201ENST00000391010 116 ntBASIC2.13□□□□□ -2.07
PTCD3Q96EY7 SNORA48.3-201ENST00000391081 134 ntBASIC2.13□□□□□ -2.07
PTCD3Q96EY7 FTH1P12-201ENST00000432137 551 ntBASIC2.13□□□□□ -2.07
PTCD3Q96EY7 RNU7-94P-201ENST00000459576 63 ntBASIC2.13□□□□□ -2.07
PTCD3Q96EY7 RNU6-62P-201ENST00000516526 102 ntBASIC2.13□□□□□ -2.07
PTCD3Q96EY7 AC007751.1-201ENST00000529260 376 ntBASIC2.13□□□□□ -2.07
PTCD3Q96EY7 MIR3126-201ENST00000577443 74 ntBASIC2.13□□□□□ -2.07
PTCD3Q96EY7 MIR4662B-201ENST00000579498 81 ntBASIC2.13□□□□□ -2.07
PTCD3Q96EY7 AC005786.1-201ENST00000588553 154 ntBASIC2.13□□□□□ -2.07
PTCD3Q96EY7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.13□□□□□ -2.07
PTCD3Q96EY7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
PTCD3Q96EY7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
PTCD3Q96EY7 RNU6-1154P-201ENST00000391001 104 ntBASIC2.12□□□□□ -2.07
PTCD3Q96EY7 RNU4-53P-201ENST00000410828 140 ntBASIC2.12□□□□□ -2.07
PTCD3Q96EY7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
PTCD3Q96EY7 RNU6-1211P-201ENST00000459179 105 ntBASIC2.12□□□□□ -2.07
PTCD3Q96EY7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.12□□□□□ -2.07
PTCD3Q96EY7 RNU1-40P-201ENST00000516816 164 ntBASIC2.12□□□□□ -2.07
PTCD3Q96EY7 RNU2-56P-201ENST00000516826 190 ntBASIC2.12□□□□□ -2.07
PTCD3Q96EY7 RNU1-97P-201ENST00000516872 164 ntBASIC2.12□□□□□ -2.07
PTCD3Q96EY7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PTCD3Q96EY7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
PTCD3Q96EY7 Y_RNA.261-201ENST00000364631 102 ntBASIC2.11□□□□□ -2.07
PTCD3Q96EY7 SNORD61-201ENST00000384252 73 ntBASIC2.11□□□□□ -2.07
PTCD3Q96EY7 MLLT10P1-201ENST00000418346 262 ntBASIC2.11□□□□□ -2.07
PTCD3Q96EY7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.11□□□□□ -2.07
PTCD3Q96EY7 RNU6-1234P-201ENST00000516877 103 ntBASIC2.11□□□□□ -2.07
PTCD3Q96EY7 RNU6-365P-201ENST00000517113 106 ntBASIC2.11□□□□□ -2.07
PTCD3Q96EY7 AP001328.1-201ENST00000528550 176 ntBASIC2.11□□□□□ -2.07
PTCD3Q96EY7 AC084364.2-201ENST00000546924 395 ntBASIC2.11□□□□□ -2.07
PTCD3Q96EY7 AC091544.4-201ENST00000555268 342 ntBASIC2.11□□□□□ -2.07
PTCD3Q96EY7 MIR4762-201ENST00000585261 75 ntBASIC2.11□□□□□ -2.07
PTCD3Q96EY7 TUG1_4.1-201ENST00000619464 181 ntBASIC2.11□□□□□ -2.07
PTCD3Q96EY7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.11□□□□□ -2.07
PTCD3Q96EY7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
PTCD3Q96EY7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PTCD3Q96EY7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PTCD3Q96EY7 SNORD50B-201ENST00000364995 70 ntBASIC2.1□□□□□ -2.07
PTCD3Q96EY7 SNORA1-201ENST00000384107 130 ntBASIC2.1□□□□□ -2.07
PTCD3Q96EY7 Y_RNA.584-201ENST00000391090 114 ntBASIC2.1□□□□□ -2.07
PTCD3Q96EY7 SNORA26-201ENST00000391286 122 ntBASIC2.1□□□□□ -2.07
PTCD3Q96EY7 RNA5SP508-201ENST00000411327 119 ntBASIC2.1□□□□□ -2.07
PTCD3Q96EY7 AC245047.3-201ENST00000429428 127 ntBASIC2.1□□□□□ -2.07
PTCD3Q96EY7 Y_RNA.666-201ENST00000516187 112 ntBASIC2.1□□□□□ -2.07
PTCD3Q96EY7 AC090142.3-201ENST00000519012 385 ntBASIC2.1□□□□□ -2.07
PTCD3Q96EY7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.1□□□□□ -2.07
PTCD3Q96EY7 MIR3935-201ENST00000583472 104 ntBASIC2.1□□□□□ -2.07
PTCD3Q96EY7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.1□□□□□ -2.07
PTCD3Q96EY7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PTCD3Q96EY7 U8.1-201ENST00000362843 134 ntBASIC2.09□□□□□ -2.07
PTCD3Q96EY7 RNU6-1290P-201ENST00000362957 109 ntBASIC2.09□□□□□ -2.07
PTCD3Q96EY7 RNU6-915P-201ENST00000364943 103 ntBASIC2.09□□□□□ -2.07
PTCD3Q96EY7 MIR518A2-201ENST00000384966 87 ntBASIC2.09□□□□□ -2.07
PTCD3Q96EY7 RNU11-3P-201ENST00000391111 133 ntBASIC2.09□□□□□ -2.07
PTCD3Q96EY7 HMGN2P39-201ENST00000398005 273 ntBASIC2.09□□□□□ -2.07
PTCD3Q96EY7 RNA5SP270-201ENST00000411361 118 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 1499.8 ms