Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 SNORA18.4-201ENST00000516440 124 ntBASIC2.65□□□□□ -1.99
BRF1Q92994 AC090049.2-201ENST00000550377 109 ntBASIC2.65□□□□□ -1.99
BRF1Q92994 AC022202.1-201ENST00000613515 211 ntBASIC2.65□□□□□ -1.99
BRF1Q92994 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
BRF1Q92994 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
BRF1Q92994 SNORD61-201ENST00000384252 73 ntBASIC2.64□□□□□ -1.99
BRF1Q92994 MIR891A-201ENST00000401237 79 ntBASIC2.64□□□□□ -1.99
BRF1Q92994 RNU7-28P-201ENST00000516759 62 ntBASIC2.64□□□□□ -1.99
BRF1Q92994 RNU2-60P-201ENST00000517290 128 ntBASIC2.64□□□□□ -1.99
BRF1Q92994 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.64□□□□□ -1.99
BRF1Q92994 MIR3121-201ENST00000579680 77 ntBASIC2.64□□□□□ -1.99
BRF1Q92994 MIR6852-201ENST00000621699 66 ntBASIC2.64□□□□□ -1.99
BRF1Q92994 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
BRF1Q92994 ZNF720P1-201ENST00000562403 1939 ntBASIC2.64□□□□□ -1.99
BRF1Q92994 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
BRF1Q92994 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
BRF1Q92994 AC005336.3-201ENST00000623833 2679 ntBASIC2.63□□□□□ -1.99
BRF1Q92994 RNU1-91P-201ENST00000364746 163 ntBASIC2.63□□□□□ -1.99
BRF1Q92994 Y_RNA.353-201ENST00000365440 108 ntBASIC2.63□□□□□ -1.99
BRF1Q92994 SNORD18B-201ENST00000365659 72 ntBASIC2.63□□□□□ -1.99
BRF1Q92994 MIR221-201ENST00000385135 110 ntBASIC2.63□□□□□ -1.99
BRF1Q92994 MIR634-201ENST00000385208 97 ntBASIC2.63□□□□□ -1.99
BRF1Q92994 RNA5SP482-201ENST00000391269 118 ntBASIC2.63□□□□□ -1.99
BRF1Q92994 MLLT10P1-201ENST00000418346 262 ntBASIC2.63□□□□□ -1.99
BRF1Q92994 SUMO1P4-201ENST00000429430 302 ntBASIC2.63□□□□□ -1.99
BRF1Q92994 AL606517.2-201ENST00000442855 241 ntBASIC2.63□□□□□ -1.99
BRF1Q92994 Y_RNA.686-201ENST00000516548 134 ntBASIC2.63□□□□□ -1.99
BRF1Q92994 Y_RNA.712-201ENST00000517011 92 ntBASIC2.63□□□□□ -1.99
BRF1Q92994 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.63□□□□□ -1.99
BRF1Q92994 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.63□□□□□ -1.99
BRF1Q92994 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.63□□□□□ -1.99
BRF1Q92994 SNORD115-3-201ENST00000363100 82 ntBASIC2.62□□□□□ -1.99
BRF1Q92994 RNU6-1019P-201ENST00000364424 107 ntBASIC2.62□□□□□ -1.99
BRF1Q92994 SNORA1-201ENST00000384107 130 ntBASIC2.62□□□□□ -1.99
BRF1Q92994 AC245047.3-201ENST00000429428 127 ntBASIC2.62□□□□□ -1.99
BRF1Q92994 RNU1-104P-201ENST00000517280 175 ntBASIC2.62□□□□□ -1.99
BRF1Q92994 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.62□□□□□ -1.99
BRF1Q92994 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
BRF1Q92994 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
BRF1Q92994 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
BRF1Q92994 RNU4-82P-201ENST00000362443 140 ntBASIC2.61□□□□□ -1.99
BRF1Q92994 Y_RNA.52-201ENST00000362760 96 ntBASIC2.61□□□□□ -1.99
BRF1Q92994 MIR548A2-201ENST00000384956 97 ntBASIC2.61□□□□□ -1.99
BRF1Q92994 BX510359.4-201ENST00000423750 193 ntBASIC2.61□□□□□ -1.99
BRF1Q92994 AC069257.2-201ENST00000441819 155 ntBASIC2.61□□□□□ -1.99
BRF1Q92994 SNRPGP13-201ENST00000442212 177 ntBASIC2.61□□□□□ -1.99
BRF1Q92994 AL158147.1-201ENST00000443970 75 ntBASIC2.61□□□□□ -1.99
BRF1Q92994 Y_RNA.666-201ENST00000516187 112 ntBASIC2.61□□□□□ -1.99
BRF1Q92994 MIR3129-201ENST00000581095 76 ntBASIC2.61□□□□□ -1.99
BRF1Q92994 AC069114.2-201ENST00000604699 304 ntBASIC2.61□□□□□ -1.99
BRF1Q92994 AC006441.5-201ENST00000612680 209 ntBASIC2.61□□□□□ -1.99
BRF1Q92994 AC009831.4-201ENST00000620744 325 ntBASIC2.61□□□□□ -1.99
BRF1Q92994 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
BRF1Q92994 Y_RNA.81-201ENST00000362997 102 ntBASIC2.6□□□□□ -1.99
BRF1Q92994 SNORD68-201ENST00000363214 84 ntBASIC2.6□□□□□ -1.99
BRF1Q92994 RNU6-215P-201ENST00000365169 102 ntBASIC2.6□□□□□ -1.99
BRF1Q92994 RNA5SP465-201ENST00000391195 109 ntBASIC2.6□□□□□ -1.99
BRF1Q92994 RNU7-107P-201ENST00000459121 61 ntBASIC2.6□□□□□ -1.99
BRF1Q92994 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.6□□□□□ -1.99
BRF1Q92994 SNORA31.11-201ENST00000516528 139 ntBASIC2.6□□□□□ -1.99
BRF1Q92994 AC084364.2-201ENST00000546924 395 ntBASIC2.6□□□□□ -1.99
BRF1Q92994 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
BRF1Q92994 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.6□□□□□ -1.99
BRF1Q92994 MIR449A-201ENST00000362113 91 ntBASIC2.59□□□□□ -1.99
BRF1Q92994 Y_RNA.114-201ENST00000363265 113 ntBASIC2.59□□□□□ -1.99
BRF1Q92994 Y_RNA.294-201ENST00000364916 102 ntBASIC2.59□□□□□ -1.99
BRF1Q92994 RNU4-53P-201ENST00000410828 140 ntBASIC2.59□□□□□ -1.99
BRF1Q92994 AL158823.1-201ENST00000418441 478 ntBASIC2.59□□□□□ -1.99
BRF1Q92994 SNRPGP14-201ENST00000435400 219 ntBASIC2.59□□□□□ -1.99
BRF1Q92994 AC104435.1-201ENST00000483483 166 ntBASIC2.59□□□□□ -1.99
BRF1Q92994 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.59□□□□□ -1.99
BRF1Q92994 RNU6-693P-201ENST00000516134 107 ntBASIC2.59□□□□□ -1.99
BRF1Q92994 Y_RNA.690-201ENST00000516603 95 ntBASIC2.59□□□□□ -1.99
BRF1Q92994 RNU6-1270P-201ENST00000517128 108 ntBASIC2.59□□□□□ -1.99
BRF1Q92994 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.59□□□□□ -1.99
BRF1Q92994 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.59□□□□□ -1.99
BRF1Q92994 MIR8054-201ENST00000620877 86 ntBASIC2.59□□□□□ -1.99
BRF1Q92994 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
BRF1Q92994 RNA5SP393-201ENST00000363423 117 ntBASIC2.58□□□□□ -2
BRF1Q92994 snoU2-30.1-201ENST00000365012 70 ntBASIC2.58□□□□□ -2
BRF1Q92994 RNU6-442P-201ENST00000383968 104 ntBASIC2.58□□□□□ -2
BRF1Q92994 SNORD20-201ENST00000384550 80 ntBASIC2.58□□□□□ -2
BRF1Q92994 MIR518F-201ENST00000384973 87 ntBASIC2.58□□□□□ -2
BRF1Q92994 RNA5SP109-201ENST00000391010 116 ntBASIC2.58□□□□□ -2
BRF1Q92994 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.58□□□□□ -2
BRF1Q92994 MIR1283-2-201ENST00000408621 87 ntBASIC2.58□□□□□ -2
BRF1Q92994 MTATP6P21-201ENST00000440681 189 ntBASIC2.58□□□□□ -2
BRF1Q92994 MIR4658-201ENST00000584344 65 ntBASIC2.58□□□□□ -2
BRF1Q92994 AP006437.1-201ENST00000641440 3685 ntBASIC2.57□□□□□ -2
BRF1Q92994 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.57□□□□□ -2
BRF1Q92994 MIRLET7G-201ENST00000362280 84 ntBASIC2.57□□□□□ -2
BRF1Q92994 RNU6-235P-201ENST00000362644 107 ntBASIC2.57□□□□□ -2
BRF1Q92994 Y_RNA.265-201ENST00000364677 108 ntBASIC2.57□□□□□ -2
BRF1Q92994 Y_RNA.336-201ENST00000365307 109 ntBASIC2.57□□□□□ -2
BRF1Q92994 SNORA80E-201ENST00000384744 137 ntBASIC2.57□□□□□ -2
BRF1Q92994 MIR518A2-201ENST00000384966 87 ntBASIC2.57□□□□□ -2
BRF1Q92994 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.57□□□□□ -2
BRF1Q92994 RNU6-440P-201ENST00000390882 105 ntBASIC2.57□□□□□ -2
BRF1Q92994 RNU11-3P-201ENST00000391111 133 ntBASIC2.57□□□□□ -2
BRF1Q92994 HMGN2P39-201ENST00000398005 273 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms