Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 Y_RNA.297-201ENST00000364950 91 ntBASIC1.59□□□□□ -2.15
TM9SF4Q92544 Y_RNA.308-201ENST00000365043 101 ntBASIC1.59□□□□□ -2.15
TM9SF4Q92544 RNU6-47P-201ENST00000383866 107 ntBASIC1.59□□□□□ -2.15
TM9SF4Q92544 RNU6-493P-201ENST00000391321 108 ntBASIC1.59□□□□□ -2.15
TM9SF4Q92544 RNU6-437P-201ENST00000459408 95 ntBASIC1.59□□□□□ -2.15
TM9SF4Q92544 RPS29P11-201ENST00000496507 171 ntBASIC1.59□□□□□ -2.15
TM9SF4Q92544 RNU7-116P-201ENST00000516940 62 ntBASIC1.59□□□□□ -2.15
TM9SF4Q92544 SNORA31.17-201ENST00000516953 127 ntBASIC1.59□□□□□ -2.15
TM9SF4Q92544 MIR4308-201ENST00000580634 81 ntBASIC1.59□□□□□ -2.15
TM9SF4Q92544 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TM9SF4Q92544 snoU2_19.4-201ENST00000364329 80 ntBASIC1.58□□□□□ -2.16
TM9SF4Q92544 BTF3P4-201ENST00000418852 495 ntBASIC1.58□□□□□ -2.16
TM9SF4Q92544 COX6CP14-201ENST00000469580 174 ntBASIC1.58□□□□□ -2.16
TM9SF4Q92544 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.58□□□□□ -2.16
TM9SF4Q92544 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.58□□□□□ -2.16
TM9SF4Q92544 MIR4781-201ENST00000585250 76 ntBASIC1.58□□□□□ -2.16
TM9SF4Q92544 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.58□□□□□ -2.16
TM9SF4Q92544 Y_RNA.24-201ENST00000362508 103 ntBASIC1.57□□□□□ -2.16
TM9SF4Q92544 Y_RNA.253-201ENST00000364562 112 ntBASIC1.57□□□□□ -2.16
TM9SF4Q92544 Y_RNA.262-201ENST00000364641 102 ntBASIC1.57□□□□□ -2.16
TM9SF4Q92544 RNA5SP363-201ENST00000365072 115 ntBASIC1.57□□□□□ -2.16
TM9SF4Q92544 RNU6-969P-201ENST00000383900 105 ntBASIC1.57□□□□□ -2.16
TM9SF4Q92544 MIR520A-201ENST00000384862 85 ntBASIC1.57□□□□□ -2.16
TM9SF4Q92544 SNORA17.3-201ENST00000391159 129 ntBASIC1.57□□□□□ -2.16
TM9SF4Q92544 Y_RNA.621-201ENST00000411065 96 ntBASIC1.57□□□□□ -2.16
TM9SF4Q92544 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.57□□□□□ -2.16
TM9SF4Q92544 AC022559.1-201ENST00000520905 205 ntBASIC1.57□□□□□ -2.16
TM9SF4Q92544 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TM9SF4Q92544 CBX3P4-201ENST00000538909 354 ntBASIC1.57□□□□□ -2.16
TM9SF4Q92544 MIR4713-201ENST00000582691 75 ntBASIC1.57□□□□□ -2.16
TM9SF4Q92544 Y_RNA.802-201ENST00000614892 130 ntBASIC1.57□□□□□ -2.16
TM9SF4Q92544 U1.36-201ENST00000620684 176 ntBASIC1.57□□□□□ -2.16
TM9SF4Q92544 MIR8054-201ENST00000620877 86 ntBASIC1.57□□□□□ -2.16
TM9SF4Q92544 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TM9SF4Q92544 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
TM9SF4Q92544 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
TM9SF4Q92544 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TM9SF4Q92544 RNU6-661P-201ENST00000362409 107 ntBASIC1.56□□□□□ -2.16
TM9SF4Q92544 Y_RNA.203-201ENST00000364106 102 ntBASIC1.56□□□□□ -2.16
TM9SF4Q92544 MIR626-201ENST00000385032 94 ntBASIC1.56□□□□□ -2.16
TM9SF4Q92544 MIR526A2-201ENST00000390198 65 ntBASIC1.56□□□□□ -2.16
TM9SF4Q92544 RNU6-381P-201ENST00000391259 108 ntBASIC1.56□□□□□ -2.16
TM9SF4Q92544 RNU7-94P-201ENST00000459576 63 ntBASIC1.56□□□□□ -2.16
TM9SF4Q92544 SCARNA8-201ENST00000515924 131 ntBASIC1.56□□□□□ -2.16
TM9SF4Q92544 RNU6-453P-201ENST00000516819 85 ntBASIC1.56□□□□□ -2.16
TM9SF4Q92544 AC103810.8-201ENST00000607347 118 ntBASIC1.56□□□□□ -2.16
TM9SF4Q92544 AL591926.4-201ENST00000616895 298 ntBASIC1.56□□□□□ -2.16
TM9SF4Q92544 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.56□□□□□ -2.16
TM9SF4Q92544 MIR367-201ENST00000362299 68 ntBASIC1.55□□□□□ -2.16
TM9SF4Q92544 RNU6-674P-201ENST00000363831 107 ntBASIC1.55□□□□□ -2.16
TM9SF4Q92544 Y_RNA.796-201ENST00000364268 102 ntBASIC1.55□□□□□ -2.16
TM9SF4Q92544 Y_RNA.229-201ENST00000364347 113 ntBASIC1.55□□□□□ -2.16
TM9SF4Q92544 RNU4-41P-201ENST00000364426 143 ntBASIC1.55□□□□□ -2.16
TM9SF4Q92544 Y_RNA.799-201ENST00000364992 102 ntBASIC1.55□□□□□ -2.16
TM9SF4Q92544 RNU4-17P-201ENST00000365598 141 ntBASIC1.55□□□□□ -2.16
TM9SF4Q92544 RNU6-144P-201ENST00000383951 107 ntBASIC1.55□□□□□ -2.16
TM9SF4Q92544 SNORA8.3-201ENST00000384679 139 ntBASIC1.55□□□□□ -2.16
TM9SF4Q92544 RNU6-440P-201ENST00000390882 105 ntBASIC1.55□□□□□ -2.16
TM9SF4Q92544 RNU6-918P-201ENST00000391219 106 ntBASIC1.55□□□□□ -2.16
TM9SF4Q92544 AC009310.1-201ENST00000414414 451 ntBASIC1.55□□□□□ -2.16
TM9SF4Q92544 COX6CP10-201ENST00000416832 224 ntBASIC1.55□□□□□ -2.16
TM9SF4Q92544 MTND5P15-201ENST00000434246 349 ntBASIC1.55□□□□□ -2.16
TM9SF4Q92544 STAG3L5P-204ENST00000443759 179 ntBASIC1.55□□□□□ -2.16
TM9SF4Q92544 AP002004.2-201ENST00000531656 154 ntBASIC1.55□□□□□ -2.16
TM9SF4Q92544 DNAJC19P9-201ENST00000555084 351 ntBASIC1.55□□□□□ -2.16
TM9SF4Q92544 MIR4724-201ENST00000579485 89 ntBASIC1.55□□□□□ -2.16
TM9SF4Q92544 MIR3668-201ENST00000582138 75 ntBASIC1.55□□□□□ -2.16
TM9SF4Q92544 AL359821.1-201ENST00000605519 182 ntBASIC1.55□□□□□ -2.16
TM9SF4Q92544 AL021707.8-201ENST00000609428 183 ntBASIC1.55□□□□□ -2.16
TM9SF4Q92544 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.55□□□□□ -2.16
TM9SF4Q92544 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
TM9SF4Q92544 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
TM9SF4Q92544 RNU6-1209P-201ENST00000363655 107 ntBASIC1.54□□□□□ -2.16
TM9SF4Q92544 RNU6-439P-201ENST00000384188 106 ntBASIC1.54□□□□□ -2.16
TM9SF4Q92544 RNU6-997P-201ENST00000384725 107 ntBASIC1.54□□□□□ -2.16
TM9SF4Q92544 MT-TR-201ENST00000387439 65 ntBASIC1.54□□□□□ -2.16
TM9SF4Q92544 MT-TT-201ENST00000387460 66 ntBASIC1.54□□□□□ -2.16
TM9SF4Q92544 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
TM9SF4Q92544 AP1B1P2-201ENST00000416196 106 ntBASIC1.54□□□□□ -2.16
TM9SF4Q92544 Z98949.2-201ENST00000440996 144 ntBASIC1.54□□□□□ -2.16
TM9SF4Q92544 AC069257.2-201ENST00000441819 155 ntBASIC1.54□□□□□ -2.16
TM9SF4Q92544 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.54□□□□□ -2.16
TM9SF4Q92544 AC009474.2-201ENST00000451383 136 ntBASIC1.54□□□□□ -2.16
TM9SF4Q92544 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.54□□□□□ -2.16
TM9SF4Q92544 AC245047.8-201ENST00000456455 284 ntBASIC1.54□□□□□ -2.16
TM9SF4Q92544 Y_RNA.644-201ENST00000459006 113 ntBASIC1.54□□□□□ -2.16
TM9SF4Q92544 SNORD11-201ENST00000459124 84 ntBASIC1.54□□□□□ -2.16
TM9SF4Q92544 RNA5SP57-201ENST00000459463 123 ntBASIC1.54□□□□□ -2.16
TM9SF4Q92544 AC099513.1-201ENST00000490423 301 ntBASIC1.54□□□□□ -2.16
TM9SF4Q92544 Y_RNA.674-201ENST00000516362 113 ntBASIC1.54□□□□□ -2.16
TM9SF4Q92544 RNU2-56P-201ENST00000516826 190 ntBASIC1.54□□□□□ -2.16
TM9SF4Q92544 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.54□□□□□ -2.16
TM9SF4Q92544 RPL23AP91-201ENST00000569211 455 ntBASIC1.54□□□□□ -2.16
TM9SF4Q92544 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TM9SF4Q92544 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TM9SF4Q92544 RNU4-62P-201ENST00000410125 130 ntBASIC1.53□□□□□ -2.16
TM9SF4Q92544 RNU2-7P-201ENST00000410794 178 ntBASIC1.53□□□□□ -2.16
TM9SF4Q92544 RNU6-321P-201ENST00000410912 106 ntBASIC1.53□□□□□ -2.16
TM9SF4Q92544 RN7SKP101-201ENST00000411376 320 ntBASIC1.53□□□□□ -2.16
TM9SF4Q92544 AL049830.1-201ENST00000468034 425 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms