Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RNU6-710P-201ENST00000410424 105 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 RNU2-61P-201ENST00000411069 191 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 PMCHL1-202ENST00000423102 261 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 AC099513.1-201ENST00000490423 301 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 AC010598.1-201ENST00000510378 103 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 CYP3A52P-201ENST00000563326 91 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 AC133485.1-201ENST00000567176 124 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 AC138907.6-201ENST00000568401 126 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 AC005357.1-201ENST00000588399 301 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 AL356055.1-201ENST00000602528 446 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 AL021879.1-201ENST00000611756 288 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 MIR8065-201ENST00000620577 100 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 Y_RNA.26-201ENST00000362539 101 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 Y_RNA.216-201ENST00000364205 93 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 Y_RNA.253-201ENST00000364562 112 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 Y_RNA.310-201ENST00000365063 113 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 RNU6-708P-201ENST00000384217 107 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 Y_RNA.498-201ENST00000384460 102 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 MIR520G-201ENST00000385064 90 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 RNU6-910P-201ENST00000390844 107 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 RNU6-131P-201ENST00000391144 107 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 U8.16-201ENST00000391279 133 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 MIR548P-201ENST00000408336 84 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 BTF3P11-201ENST00000426582 477 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 AL162725.1-201ENST00000435405 301 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 MTND5P22-201ENST00000458380 195 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 RNU7-141P-201ENST00000459304 62 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 RNU7-12P-201ENST00000516030 62 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 SNORD116.3-201ENST00000517176 78 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 AL358944.1-201ENST00000528537 144 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 AP003072.1-201ENST00000531740 145 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 AC055872.1-201ENST00000570978 278 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 SNORA77B-201ENST00000578179 125 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 MIR5188-201ENST00000583467 113 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 AC044792.1-201ENST00000593294 196 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 AC127459.3-201ENST00000624328 466 ntBASIC0.72□□□□□ -2.29
SHROOM3Q8TF72 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SHROOM3Q8TF72 SNORD33-201ENST00000362761 85 ntBASIC0.71□□□□□ -2.3
SHROOM3Q8TF72 RNU6-833P-201ENST00000363486 107 ntBASIC0.71□□□□□ -2.3
SHROOM3Q8TF72 Y_RNA.210-201ENST00000364161 110 ntBASIC0.71□□□□□ -2.3
SHROOM3Q8TF72 RNU6-806P-201ENST00000365147 105 ntBASIC0.71□□□□□ -2.3
SHROOM3Q8TF72 Y_RNA.439-201ENST00000384119 94 ntBASIC0.71□□□□□ -2.3
SHROOM3Q8TF72 RNU6-136P-201ENST00000384663 107 ntBASIC0.71□□□□□ -2.3
SHROOM3Q8TF72 MIR526A1-201ENST00000384897 85 ntBASIC0.71□□□□□ -2.3
SHROOM3Q8TF72 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
SHROOM3Q8TF72 RNU6-159P-201ENST00000391080 106 ntBASIC0.71□□□□□ -2.3
SHROOM3Q8TF72 AC092628.1-201ENST00000436250 252 ntBASIC0.71□□□□□ -2.3
SHROOM3Q8TF72 RNU6-437P-201ENST00000459408 95 ntBASIC0.71□□□□□ -2.3
SHROOM3Q8TF72 AC114811.1-201ENST00000507207 168 ntBASIC0.71□□□□□ -2.3
SHROOM3Q8TF72 RNU6-764P-201ENST00000516396 105 ntBASIC0.71□□□□□ -2.3
SHROOM3Q8TF72 HSPE1P19-201ENST00000603327 295 ntBASIC0.71□□□□□ -2.3
SHROOM3Q8TF72 AL357312.1-201ENST00000603879 298 ntBASIC0.71□□□□□ -2.3
SHROOM3Q8TF72 AC037487.3-201ENST00000606668 112 ntBASIC0.71□□□□□ -2.3
SHROOM3Q8TF72 SNORA28-201ENST00000606769 126 ntBASIC0.71□□□□□ -2.3
SHROOM3Q8TF72 MIR302D-201ENST00000362275 68 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 Y_RNA.222-201ENST00000364264 102 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 snoU2-30.1-201ENST00000365012 70 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 Y_RNA.341-201ENST00000365341 102 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 RNU6-1264P-201ENST00000383891 107 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 SNORA22-201ENST00000383907 134 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 SNORD38C-201ENST00000384381 69 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 SNORA22C-201ENST00000384614 134 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 RNU6-855P-201ENST00000410395 104 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 RNU6-121P-201ENST00000410525 99 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 MLLT10P1-201ENST00000418346 262 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 AC233266.1-201ENST00000454518 96 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 RPL39P39-201ENST00000455840 151 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 LINC01399-202ENST00000458450 244 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 RNU6-917P-201ENST00000516294 104 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 RNU4-77P-201ENST00000516692 156 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 SCARNA24.2-201ENST00000516968 130 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 AC104695.3-201ENST00000604052 296 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 SNORD113-5-201ENST00000607261 78 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 AC242852.1-201ENST00000612151 96 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 AC010205.1-201ENST00000616668 449 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 AC073349.3-201ENST00000617616 186 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 AC244015.1-201ENST00000622301 99 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 RNU6-474P-201ENST00000384243 107 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 Y_RNA.460-201ENST00000384255 102 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 SNORA72-201ENST00000384339 132 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 RNU6-823P-201ENST00000391042 103 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 MIR873-201ENST00000401120 77 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 RNU6-1054P-201ENST00000411293 104 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 AL390729.2-201ENST00000416137 156 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 CALM2P4-201ENST00000430810 426 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 AC245047.7-201ENST00000440265 293 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 STAG3L5P-204ENST00000443759 179 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 snoU13.9-201ENST00000458927 103 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 AC048334.1-201ENST00000477975 159 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 UBL5P1-201ENST00000507979 193 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 MRPS35P2-201ENST00000508242 191 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 SNORA31.4-201ENST00000516049 129 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 RNU6-947P-201ENST00000516264 106 ntBASIC0.7□□□□□ -2.3
SHROOM3Q8TF72 RNU2-56P-201ENST00000516826 190 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms