Protein–RNA interactions for Protein: Q8NHV9

RHOXF1, Rhox homeobox family member 1, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1Q8NHV9 RNU2-7P-201ENST00000410794 178 ntBASIC1.22□□□□□ -2.21
RHOXF1Q8NHV9 JTBP1-201ENST00000441314 247 ntBASIC1.22□□□□□ -2.21
RHOXF1Q8NHV9 AC245047.8-201ENST00000456455 284 ntBASIC1.22□□□□□ -2.21
RHOXF1Q8NHV9 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
RHOXF1Q8NHV9 RNA5SP481-201ENST00000516814 122 ntBASIC1.22□□□□□ -2.21
RHOXF1Q8NHV9 RNU6-388P-201ENST00000517012 105 ntBASIC1.22□□□□□ -2.21
RHOXF1Q8NHV9 RNU6-389P-201ENST00000517048 105 ntBASIC1.22□□□□□ -2.21
RHOXF1Q8NHV9 MIR4709-201ENST00000577272 72 ntBASIC1.22□□□□□ -2.21
RHOXF1Q8NHV9 AC015688.6-201ENST00000577737 104 ntBASIC1.22□□□□□ -2.21
RHOXF1Q8NHV9 SNORD53B-201ENST00000577887 78 ntBASIC1.22□□□□□ -2.21
RHOXF1Q8NHV9 MIR4308-201ENST00000580634 81 ntBASIC1.22□□□□□ -2.21
RHOXF1Q8NHV9 AC009779.6-201ENST00000603972 165 ntBASIC1.22□□□□□ -2.21
RHOXF1Q8NHV9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.22□□□□□ -2.21
RHOXF1Q8NHV9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.22□□□□□ -2.21
RHOXF1Q8NHV9 AL161722.3-201ENST00000605789 2983 ntBASIC1.22□□□□□ -2.21
RHOXF1Q8NHV9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
RHOXF1Q8NHV9 MIR424-201ENST00000362227 98 ntBASIC1.21□□□□□ -2.22
RHOXF1Q8NHV9 U8.2-201ENST00000363156 134 ntBASIC1.21□□□□□ -2.22
RHOXF1Q8NHV9 RNU6-1205P-201ENST00000363625 106 ntBASIC1.21□□□□□ -2.22
RHOXF1Q8NHV9 Y_RNA.274-201ENST00000364714 101 ntBASIC1.21□□□□□ -2.22
RHOXF1Q8NHV9 SNORD50B-201ENST00000364995 70 ntBASIC1.21□□□□□ -2.22
RHOXF1Q8NHV9 Y_RNA.401-201ENST00000383965 117 ntBASIC1.21□□□□□ -2.22
RHOXF1Q8NHV9 Y_RNA.478-201ENST00000384358 107 ntBASIC1.21□□□□□ -2.22
RHOXF1Q8NHV9 MIR634-201ENST00000385208 97 ntBASIC1.21□□□□□ -2.22
RHOXF1Q8NHV9 MIR526A2-201ENST00000390198 65 ntBASIC1.21□□□□□ -2.22
RHOXF1Q8NHV9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
RHOXF1Q8NHV9 Y_RNA.626-201ENST00000411288 95 ntBASIC1.21□□□□□ -2.22
RHOXF1Q8NHV9 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.21□□□□□ -2.22
RHOXF1Q8NHV9 SNRPGP14-201ENST00000435400 219 ntBASIC1.21□□□□□ -2.22
RHOXF1Q8NHV9 AC093850.1-201ENST00000454121 251 ntBASIC1.21□□□□□ -2.22
RHOXF1Q8NHV9 RPS29P29-201ENST00000456396 171 ntBASIC1.21□□□□□ -2.22
RHOXF1Q8NHV9 RNU7-34P-201ENST00000459394 64 ntBASIC1.21□□□□□ -2.22
RHOXF1Q8NHV9 HMGN1P7-201ENST00000491722 313 ntBASIC1.21□□□□□ -2.22
RHOXF1Q8NHV9 RN7SKP179-201ENST00000516126 217 ntBASIC1.21□□□□□ -2.22
RHOXF1Q8NHV9 RNU2-56P-201ENST00000516826 190 ntBASIC1.21□□□□□ -2.22
RHOXF1Q8NHV9 AC130289.1-201ENST00000577321 73 ntBASIC1.21□□□□□ -2.22
RHOXF1Q8NHV9 AC073349.3-201ENST00000617616 186 ntBASIC1.21□□□□□ -2.22
RHOXF1Q8NHV9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
RHOXF1Q8NHV9 MIR126-201ENST00000362291 85 ntBASIC1.2□□□□□ -2.22
RHOXF1Q8NHV9 Y_RNA.24-201ENST00000362508 103 ntBASIC1.2□□□□□ -2.22
RHOXF1Q8NHV9 Y_RNA.229-201ENST00000364347 113 ntBASIC1.2□□□□□ -2.22
RHOXF1Q8NHV9 Y_RNA.265-201ENST00000364677 108 ntBASIC1.2□□□□□ -2.22
RHOXF1Q8NHV9 SNORA20.1-201ENST00000364790 130 ntBASIC1.2□□□□□ -2.22
RHOXF1Q8NHV9 RNU6-47P-201ENST00000383866 107 ntBASIC1.2□□□□□ -2.22
RHOXF1Q8NHV9 MIR526A1-201ENST00000384897 85 ntBASIC1.2□□□□□ -2.22
RHOXF1Q8NHV9 MT-TT-201ENST00000387460 66 ntBASIC1.2□□□□□ -2.22
RHOXF1Q8NHV9 SNORD72-201ENST00000390994 80 ntBASIC1.2□□□□□ -2.22
RHOXF1Q8NHV9 RNU6-381P-201ENST00000391259 108 ntBASIC1.2□□□□□ -2.22
RHOXF1Q8NHV9 RN7SKP200-201ENST00000410564 320 ntBASIC1.2□□□□□ -2.22
RHOXF1Q8NHV9 AC004965.1-201ENST00000413033 213 ntBASIC1.2□□□□□ -2.22
RHOXF1Q8NHV9 PGBD4P5-201ENST00000445958 426 ntBASIC1.2□□□□□ -2.22
RHOXF1Q8NHV9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.2□□□□□ -2.22
RHOXF1Q8NHV9 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.2□□□□□ -2.22
RHOXF1Q8NHV9 RPL23AP91-201ENST00000569211 455 ntBASIC1.2□□□□□ -2.22
RHOXF1Q8NHV9 AP000942.4-201ENST00000604811 241 ntBASIC1.2□□□□□ -2.22
RHOXF1Q8NHV9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.2□□□□□ -2.22
RHOXF1Q8NHV9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.19□□□□□ -2.22
RHOXF1Q8NHV9 SNORD68-201ENST00000363214 84 ntBASIC1.19□□□□□ -2.22
RHOXF1Q8NHV9 Y_RNA.293-201ENST00000364908 93 ntBASIC1.19□□□□□ -2.22
RHOXF1Q8NHV9 RNU6-144P-201ENST00000383951 107 ntBASIC1.19□□□□□ -2.22
RHOXF1Q8NHV9 MIR660-201ENST00000385235 97 ntBASIC1.19□□□□□ -2.22
RHOXF1Q8NHV9 RNA5SP482-201ENST00000391269 118 ntBASIC1.19□□□□□ -2.22
RHOXF1Q8NHV9 Y_RNA.621-201ENST00000411065 96 ntBASIC1.19□□□□□ -2.22
RHOXF1Q8NHV9 PIGPP3-201ENST00000425307 415 ntBASIC1.19□□□□□ -2.22
RHOXF1Q8NHV9 FTH1P12-201ENST00000432137 551 ntBASIC1.19□□□□□ -2.22
RHOXF1Q8NHV9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.19□□□□□ -2.22
RHOXF1Q8NHV9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.19□□□□□ -2.22
RHOXF1Q8NHV9 AC114811.1-201ENST00000507207 168 ntBASIC1.19□□□□□ -2.22
RHOXF1Q8NHV9 RNU6-561P-201ENST00000516222 102 ntBASIC1.19□□□□□ -2.22
RHOXF1Q8NHV9 MIR4778-201ENST00000577635 80 ntBASIC1.19□□□□□ -2.22
RHOXF1Q8NHV9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.19□□□□□ -2.22
RHOXF1Q8NHV9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.19□□□□□ -2.22
RHOXF1Q8NHV9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
RHOXF1Q8NHV9 RNU6-457P-201ENST00000363999 107 ntBASIC1.18□□□□□ -2.22
RHOXF1Q8NHV9 RNU6-918P-201ENST00000391219 106 ntBASIC1.18□□□□□ -2.22
RHOXF1Q8NHV9 AL034345.1-201ENST00000407768 123 ntBASIC1.18□□□□□ -2.22
RHOXF1Q8NHV9 Y_RNA.618-201ENST00000410949 107 ntBASIC1.18□□□□□ -2.22
RHOXF1Q8NHV9 COX6CP10-201ENST00000416832 224 ntBASIC1.18□□□□□ -2.22
RHOXF1Q8NHV9 RNU4-71P-201ENST00000516258 113 ntBASIC1.18□□□□□ -2.22
RHOXF1Q8NHV9 RNU6-917P-201ENST00000516294 104 ntBASIC1.18□□□□□ -2.22
RHOXF1Q8NHV9 Y_RNA.679-201ENST00000516416 91 ntBASIC1.18□□□□□ -2.22
RHOXF1Q8NHV9 RNU7-28P-201ENST00000516759 62 ntBASIC1.18□□□□□ -2.22
RHOXF1Q8NHV9 SUMO2P16-201ENST00000519475 264 ntBASIC1.18□□□□□ -2.22
RHOXF1Q8NHV9 AC008507.4-201ENST00000585464 127 ntBASIC1.18□□□□□ -2.22
RHOXF1Q8NHV9 MIR8074-201ENST00000615081 81 ntBASIC1.18□□□□□ -2.22
RHOXF1Q8NHV9 AL513423.1-201ENST00000621695 132 ntBASIC1.18□□□□□ -2.22
RHOXF1Q8NHV9 RNU6-923P-201ENST00000364753 107 ntBASIC1.17□□□□□ -2.22
RHOXF1Q8NHV9 Y_RNA.308-201ENST00000365043 101 ntBASIC1.17□□□□□ -2.22
RHOXF1Q8NHV9 RNU6-493P-201ENST00000391321 108 ntBASIC1.17□□□□□ -2.22
RHOXF1Q8NHV9 MIR1298-201ENST00000408783 112 ntBASIC1.17□□□□□ -2.22
RHOXF1Q8NHV9 AC092991.1-201ENST00000477176 376 ntBASIC1.17□□□□□ -2.22
RHOXF1Q8NHV9 RNU6-295P-201ENST00000516901 104 ntBASIC1.17□□□□□ -2.22
RHOXF1Q8NHV9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.17□□□□□ -2.22
RHOXF1Q8NHV9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
RHOXF1Q8NHV9 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.17□□□□□ -2.22
RHOXF1Q8NHV9 MIR4724-201ENST00000579485 89 ntBASIC1.17□□□□□ -2.22
RHOXF1Q8NHV9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
RHOXF1Q8NHV9 AL049861.1-201ENST00000603130 150 ntBASIC1.17□□□□□ -2.22
RHOXF1Q8NHV9 AC120024.3-201ENST00000603167 156 ntBASIC1.17□□□□□ -2.22
RHOXF1Q8NHV9 Y_RNA.802-201ENST00000614892 130 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms