Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.56□□□□□ -2
NUP43Q8NFH3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
NUP43Q8NFH3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
NUP43Q8NFH3 Y_RNA.116-201ENST00000363292 103 ntBASIC2.55□□□□□ -2
NUP43Q8NFH3 SNORD14E-201ENST00000364009 85 ntBASIC2.55□□□□□ -2
NUP43Q8NFH3 Y_RNA.281-201ENST00000364774 94 ntBASIC2.55□□□□□ -2
NUP43Q8NFH3 Y_RNA.309-201ENST00000365046 111 ntBASIC2.55□□□□□ -2
NUP43Q8NFH3 Y_RNA.410-201ENST00000383992 113 ntBASIC2.55□□□□□ -2
NUP43Q8NFH3 MIR802-201ENST00000390235 94 ntBASIC2.55□□□□□ -2
NUP43Q8NFH3 RN7SKP123-201ENST00000410732 291 ntBASIC2.55□□□□□ -2
NUP43Q8NFH3 RNA5SP136-201ENST00000410906 107 ntBASIC2.55□□□□□ -2
NUP43Q8NFH3 RNA5SP344-201ENST00000411081 104 ntBASIC2.55□□□□□ -2
NUP43Q8NFH3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.55□□□□□ -2
NUP43Q8NFH3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.55□□□□□ -2
NUP43Q8NFH3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.55□□□□□ -2
NUP43Q8NFH3 uc_338.28-201ENST00000612082 187 ntBASIC2.55□□□□□ -2
NUP43Q8NFH3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.55□□□□□ -2
NUP43Q8NFH3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.55□□□□□ -2
NUP43Q8NFH3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
NUP43Q8NFH3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.55□□□□□ -2
NUP43Q8NFH3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.55□□□□□ -2
NUP43Q8NFH3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.55□□□□□ -2
NUP43Q8NFH3 RNU6-23P-201ENST00000363283 107 ntBASIC2.54□□□□□ -2
NUP43Q8NFH3 RNU6-1255P-201ENST00000363434 112 ntBASIC2.54□□□□□ -2
NUP43Q8NFH3 U8.9-201ENST00000365667 134 ntBASIC2.54□□□□□ -2
NUP43Q8NFH3 Y_RNA.547-201ENST00000384654 119 ntBASIC2.54□□□□□ -2
NUP43Q8NFH3 MIR570-201ENST00000384917 97 ntBASIC2.54□□□□□ -2
NUP43Q8NFH3 AL138827.1-201ENST00000402666 306 ntBASIC2.54□□□□□ -2
NUP43Q8NFH3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.54□□□□□ -2
NUP43Q8NFH3 AC245047.3-201ENST00000429428 127 ntBASIC2.54□□□□□ -2
NUP43Q8NFH3 AL135938.1-201ENST00000443141 297 ntBASIC2.54□□□□□ -2
NUP43Q8NFH3 AC104389.3-201ENST00000445629 235 ntBASIC2.54□□□□□ -2
NUP43Q8NFH3 COX6CP6-201ENST00000490840 228 ntBASIC2.54□□□□□ -2
NUP43Q8NFH3 RPS26P48-201ENST00000491713 339 ntBASIC2.54□□□□□ -2
NUP43Q8NFH3 SNORD45.4-201ENST00000516629 73 ntBASIC2.54□□□□□ -2
NUP43Q8NFH3 AC004486.1-201ENST00000546846 233 ntBASIC2.54□□□□□ -2
NUP43Q8NFH3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.54□□□□□ -2
NUP43Q8NFH3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NUP43Q8NFH3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.53□□□□□ -2
NUP43Q8NFH3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NUP43Q8NFH3 MIR450A1-201ENST00000362262 91 ntBASIC2.53□□□□□ -2
NUP43Q8NFH3 RNU6-1084P-201ENST00000362498 107 ntBASIC2.53□□□□□ -2
NUP43Q8NFH3 Y_RNA.37-201ENST00000362606 108 ntBASIC2.53□□□□□ -2
NUP43Q8NFH3 SNORD115-28-201ENST00000363931 81 ntBASIC2.53□□□□□ -2
NUP43Q8NFH3 RNU1-112P-201ENST00000364401 164 ntBASIC2.53□□□□□ -2
NUP43Q8NFH3 snoU2-30.1-201ENST00000365012 70 ntBASIC2.53□□□□□ -2
NUP43Q8NFH3 RNU6-1189P-201ENST00000383958 107 ntBASIC2.53□□□□□ -2
NUP43Q8NFH3 RNU6-106P-201ENST00000384405 107 ntBASIC2.53□□□□□ -2
NUP43Q8NFH3 RNA5SP109-201ENST00000391010 116 ntBASIC2.53□□□□□ -2
NUP43Q8NFH3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.53□□□□□ -2
NUP43Q8NFH3 RNU6-240P-201ENST00000516098 97 ntBASIC2.53□□□□□ -2
NUP43Q8NFH3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.53□□□□□ -2
NUP43Q8NFH3 AC007012.1-201ENST00000567192 175 ntBASIC2.53□□□□□ -2
NUP43Q8NFH3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.53□□□□□ -2
NUP43Q8NFH3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NUP43Q8NFH3 SNORA2.2-201ENST00000365473 135 ntBASIC2.52□□□□□ -2.01
NUP43Q8NFH3 RNU1-109P-201ENST00000383960 147 ntBASIC2.52□□□□□ -2.01
NUP43Q8NFH3 RNA5SP482-201ENST00000391269 118 ntBASIC2.52□□□□□ -2.01
NUP43Q8NFH3 RNU6-938P-201ENST00000411285 103 ntBASIC2.52□□□□□ -2.01
NUP43Q8NFH3 AL031737.1-201ENST00000450125 223 ntBASIC2.52□□□□□ -2.01
NUP43Q8NFH3 SNORD36C-201ENST00000516733 66 ntBASIC2.52□□□□□ -2.01
NUP43Q8NFH3 MIR4435-1-201ENST00000582552 80 ntBASIC2.52□□□□□ -2.01
NUP43Q8NFH3 ELOCP29-201ENST00000588193 334 ntBASIC2.52□□□□□ -2.01
NUP43Q8NFH3 AC022202.1-201ENST00000613515 211 ntBASIC2.52□□□□□ -2.01
NUP43Q8NFH3 AL449363.1-201ENST00000617815 186 ntBASIC2.52□□□□□ -2.01
NUP43Q8NFH3 MIR6733-201ENST00000635723 61 ntBASIC2.52□□□□□ -2.01
NUP43Q8NFH3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.51□□□□□ -2.01
NUP43Q8NFH3 Y_RNA.336-201ENST00000365307 109 ntBASIC2.51□□□□□ -2.01
NUP43Q8NFH3 Y_RNA.495-201ENST00000384435 112 ntBASIC2.51□□□□□ -2.01
NUP43Q8NFH3 SNORA80E-201ENST00000384744 137 ntBASIC2.51□□□□□ -2.01
NUP43Q8NFH3 RNA5SP21-201ENST00000410917 96 ntBASIC2.51□□□□□ -2.01
NUP43Q8NFH3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.51□□□□□ -2.01
NUP43Q8NFH3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.51□□□□□ -2.01
NUP43Q8NFH3 AL109933.2-201ENST00000452651 260 ntBASIC2.51□□□□□ -2.01
NUP43Q8NFH3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.51□□□□□ -2.01
NUP43Q8NFH3 RNA5SP356-201ENST00000515972 94 ntBASIC2.51□□□□□ -2.01
NUP43Q8NFH3 RNU6-412P-201ENST00000516434 106 ntBASIC2.51□□□□□ -2.01
NUP43Q8NFH3 RNA5SP367-201ENST00000516557 118 ntBASIC2.51□□□□□ -2.01
NUP43Q8NFH3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.51□□□□□ -2.01
NUP43Q8NFH3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
NUP43Q8NFH3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
NUP43Q8NFH3 RNU6-349P-201ENST00000362402 107 ntBASIC2.5□□□□□ -2.01
NUP43Q8NFH3 Y_RNA.85-201ENST00000363014 111 ntBASIC2.5□□□□□ -2.01
NUP43Q8NFH3 SNORD115-3-201ENST00000363100 82 ntBASIC2.5□□□□□ -2.01
NUP43Q8NFH3 RNU6-1107P-201ENST00000364817 104 ntBASIC2.5□□□□□ -2.01
NUP43Q8NFH3 Y_RNA.549-201ENST00000384657 102 ntBASIC2.5□□□□□ -2.01
NUP43Q8NFH3 RNU6-554P-201ENST00000410466 106 ntBASIC2.5□□□□□ -2.01
NUP43Q8NFH3 AL445646.1-201ENST00000431784 216 ntBASIC2.5□□□□□ -2.01
NUP43Q8NFH3 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.5□□□□□ -2.01
NUP43Q8NFH3 RNU7-28P-201ENST00000516759 62 ntBASIC2.5□□□□□ -2.01
NUP43Q8NFH3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.5□□□□□ -2.01
NUP43Q8NFH3 AC079600.2-201ENST00000550076 130 ntBASIC2.5□□□□□ -2.01
NUP43Q8NFH3 AC026271.5-201ENST00000577873 130 ntBASIC2.5□□□□□ -2.01
NUP43Q8NFH3 MIR4635-201ENST00000583759 79 ntBASIC2.5□□□□□ -2.01
NUP43Q8NFH3 AC245060.5-201ENST00000610778 3293 ntBASIC2.5□□□□□ -2.01
NUP43Q8NFH3 ZNF720P1-201ENST00000562403 1939 ntBASIC2.5□□□□□ -2.01
NUP43Q8NFH3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NUP43Q8NFH3 Y_RNA.265-201ENST00000364677 108 ntBASIC2.49□□□□□ -2.01
NUP43Q8NFH3 RNU6-32P-201ENST00000383948 107 ntBASIC2.49□□□□□ -2.01
NUP43Q8NFH3 Y_RNA.440-201ENST00000384120 114 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms