Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 SNORA1-201ENST00000384107 130 ntBASIC2.31□□□□□ -2.04
HIPK4Q8NE63 RNU6-22P-201ENST00000384355 107 ntBASIC2.31□□□□□ -2.04
HIPK4Q8NE63 SNORD23.1-201ENST00000408212 104 ntBASIC2.31□□□□□ -2.04
HIPK4Q8NE63 AL158823.1-201ENST00000418441 478 ntBASIC2.31□□□□□ -2.04
HIPK4Q8NE63 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.31□□□□□ -2.04
HIPK4Q8NE63 RNU7-193P-201ENST00000516723 65 ntBASIC2.31□□□□□ -2.04
HIPK4Q8NE63 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HIPK4Q8NE63 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
HIPK4Q8NE63 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HIPK4Q8NE63 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HIPK4Q8NE63 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HIPK4Q8NE63 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
HIPK4Q8NE63 MIRLET7C-201ENST00000362160 84 ntBASIC2.3□□□□□ -2.04
HIPK4Q8NE63 SNORA80A-201ENST00000363922 136 ntBASIC2.3□□□□□ -2.04
HIPK4Q8NE63 Y_RNA.218-201ENST00000364218 104 ntBASIC2.3□□□□□ -2.04
HIPK4Q8NE63 Y_RNA.242-201ENST00000364473 110 ntBASIC2.3□□□□□ -2.04
HIPK4Q8NE63 RNU6-915P-201ENST00000364943 103 ntBASIC2.3□□□□□ -2.04
HIPK4Q8NE63 MIR196B-201ENST00000384852 84 ntBASIC2.3□□□□□ -2.04
HIPK4Q8NE63 Y_RNA.584-201ENST00000391090 114 ntBASIC2.3□□□□□ -2.04
HIPK4Q8NE63 RNA5SP450-201ENST00000411206 102 ntBASIC2.3□□□□□ -2.04
HIPK4Q8NE63 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.3□□□□□ -2.04
HIPK4Q8NE63 SNRPGP14-201ENST00000435400 219 ntBASIC2.3□□□□□ -2.04
HIPK4Q8NE63 SNORD109B-201ENST00000458961 67 ntBASIC2.3□□□□□ -2.04
HIPK4Q8NE63 SNORD109A-201ENST00000459128 67 ntBASIC2.3□□□□□ -2.04
HIPK4Q8NE63 SNORD45.4-201ENST00000516629 73 ntBASIC2.3□□□□□ -2.04
HIPK4Q8NE63 RNU6-1270P-201ENST00000517128 108 ntBASIC2.3□□□□□ -2.04
HIPK4Q8NE63 RNA5SP437-201ENST00000517249 129 ntBASIC2.3□□□□□ -2.04
HIPK4Q8NE63 AP001328.1-201ENST00000528550 176 ntBASIC2.3□□□□□ -2.04
HIPK4Q8NE63 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.3□□□□□ -2.04
HIPK4Q8NE63 U4.3-201ENST00000621047 82 ntBASIC2.3□□□□□ -2.04
HIPK4Q8NE63 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
HIPK4Q8NE63 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HIPK4Q8NE63 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.29□□□□□ -2.04
HIPK4Q8NE63 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HIPK4Q8NE63 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.29□□□□□ -2.04
HIPK4Q8NE63 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.29□□□□□ -2.04
HIPK4Q8NE63 RNU6-112P-201ENST00000363599 104 ntBASIC2.29□□□□□ -2.04
HIPK4Q8NE63 RNU6-296P-201ENST00000384608 107 ntBASIC2.29□□□□□ -2.04
HIPK4Q8NE63 MIR27B-201ENST00000385129 97 ntBASIC2.29□□□□□ -2.04
HIPK4Q8NE63 AC131055.1-201ENST00000584626 316 ntBASIC2.29□□□□□ -2.04
HIPK4Q8NE63 MIR6840-201ENST00000611937 71 ntBASIC2.29□□□□□ -2.04
HIPK4Q8NE63 AC006441.5-201ENST00000612680 209 ntBASIC2.29□□□□□ -2.04
HIPK4Q8NE63 AL365222.1-201ENST00000614661 98 ntBASIC2.29□□□□□ -2.04
HIPK4Q8NE63 TUG1_4.1-201ENST00000619464 181 ntBASIC2.29□□□□□ -2.04
HIPK4Q8NE63 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HIPK4Q8NE63 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HIPK4Q8NE63 RNU6-1084P-201ENST00000362498 107 ntBASIC2.28□□□□□ -2.04
HIPK4Q8NE63 snoU2-30.1-201ENST00000365012 70 ntBASIC2.28□□□□□ -2.04
HIPK4Q8NE63 MIR518F-201ENST00000384973 87 ntBASIC2.28□□□□□ -2.04
HIPK4Q8NE63 MIR624-201ENST00000385217 97 ntBASIC2.28□□□□□ -2.04
HIPK4Q8NE63 SNRPGP13-201ENST00000442212 177 ntBASIC2.28□□□□□ -2.04
HIPK4Q8NE63 RN7SKP132-201ENST00000516001 208 ntBASIC2.28□□□□□ -2.04
HIPK4Q8NE63 RNU6-479P-201ENST00000516348 105 ntBASIC2.28□□□□□ -2.04
HIPK4Q8NE63 RNU6-1116P-201ENST00000517269 99 ntBASIC2.28□□□□□ -2.04
HIPK4Q8NE63 RNU2-60P-201ENST00000517290 128 ntBASIC2.28□□□□□ -2.04
HIPK4Q8NE63 MIR3129-201ENST00000581095 76 ntBASIC2.28□□□□□ -2.04
HIPK4Q8NE63 SNORA28-201ENST00000606769 126 ntBASIC2.28□□□□□ -2.04
HIPK4Q8NE63 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
HIPK4Q8NE63 AL136360.1-201ENST00000503377 1900 ntBASIC2.28□□□□□ -2.04
HIPK4Q8NE63 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.27□□□□□ -2.05
HIPK4Q8NE63 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
HIPK4Q8NE63 U8.1-201ENST00000362843 134 ntBASIC2.27□□□□□ -2.05
HIPK4Q8NE63 SNORD14E-201ENST00000364009 85 ntBASIC2.27□□□□□ -2.05
HIPK4Q8NE63 RNU6-268P-201ENST00000364174 107 ntBASIC2.27□□□□□ -2.05
HIPK4Q8NE63 RNU6-442P-201ENST00000383968 104 ntBASIC2.27□□□□□ -2.05
HIPK4Q8NE63 MIR520A-201ENST00000384862 85 ntBASIC2.27□□□□□ -2.05
HIPK4Q8NE63 RN7SKP200-201ENST00000410564 320 ntBASIC2.27□□□□□ -2.05
HIPK4Q8NE63 RNU2-51P-201ENST00000410708 197 ntBASIC2.27□□□□□ -2.05
HIPK4Q8NE63 RNA5SP127-201ENST00000411051 133 ntBASIC2.27□□□□□ -2.05
HIPK4Q8NE63 RNA5SP184-201ENST00000411071 108 ntBASIC2.27□□□□□ -2.05
HIPK4Q8NE63 RNU6-1211P-201ENST00000459179 105 ntBASIC2.27□□□□□ -2.05
HIPK4Q8NE63 RNU6-693P-201ENST00000516134 107 ntBASIC2.27□□□□□ -2.05
HIPK4Q8NE63 Y_RNA.686-201ENST00000516548 134 ntBASIC2.27□□□□□ -2.05
HIPK4Q8NE63 U7.2-201ENST00000607576 63 ntBASIC2.27□□□□□ -2.05
HIPK4Q8NE63 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HIPK4Q8NE63 Y_RNA.71-201ENST00000362892 104 ntBASIC2.26□□□□□ -2.05
HIPK4Q8NE63 SNORD114-30-201ENST00000364448 72 ntBASIC2.26□□□□□ -2.05
HIPK4Q8NE63 MIR539-201ENST00000365690 78 ntBASIC2.26□□□□□ -2.05
HIPK4Q8NE63 RNU6-1081P-201ENST00000384537 107 ntBASIC2.26□□□□□ -2.05
HIPK4Q8NE63 MIR802-201ENST00000390235 94 ntBASIC2.26□□□□□ -2.05
HIPK4Q8NE63 MIR548O-201ENST00000408583 114 ntBASIC2.26□□□□□ -2.05
HIPK4Q8NE63 RNU2-52P-201ENST00000410680 190 ntBASIC2.26□□□□□ -2.05
HIPK4Q8NE63 CALM2P4-201ENST00000430810 426 ntBASIC2.26□□□□□ -2.05
HIPK4Q8NE63 RPL23AP63-201ENST00000498752 471 ntBASIC2.26□□□□□ -2.05
HIPK4Q8NE63 AC114811.1-201ENST00000507207 168 ntBASIC2.26□□□□□ -2.05
HIPK4Q8NE63 RNA5SP356-201ENST00000515972 94 ntBASIC2.26□□□□□ -2.05
HIPK4Q8NE63 RNA5SP320-201ENST00000516263 124 ntBASIC2.26□□□□□ -2.05
HIPK4Q8NE63 SNORA18.4-201ENST00000516440 124 ntBASIC2.26□□□□□ -2.05
HIPK4Q8NE63 RNU6-62P-201ENST00000516526 102 ntBASIC2.26□□□□□ -2.05
HIPK4Q8NE63 SCARNA16.3-201ENST00000516595 184 ntBASIC2.26□□□□□ -2.05
HIPK4Q8NE63 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.26□□□□□ -2.05
HIPK4Q8NE63 MIR4319-201ENST00000577285 85 ntBASIC2.26□□□□□ -2.05
HIPK4Q8NE63 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.26□□□□□ -2.05
HIPK4Q8NE63 AC067747.1-201ENST00000608026 250 ntBASIC2.26□□□□□ -2.05
HIPK4Q8NE63 ZNF658B-202ENST00000615961 3375 ntBASIC2.26□□□□□ -2.05
HIPK4Q8NE63 Y_RNA.52-201ENST00000362760 96 ntBASIC2.25□□□□□ -2.05
HIPK4Q8NE63 Y_RNA.120-201ENST00000363304 110 ntBASIC2.25□□□□□ -2.05
HIPK4Q8NE63 Y_RNA.336-201ENST00000365307 109 ntBASIC2.25□□□□□ -2.05
HIPK4Q8NE63 RNU6-1292P-201ENST00000383856 107 ntBASIC2.25□□□□□ -2.05
HIPK4Q8NE63 RNU6-1168P-201ENST00000390831 104 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms