Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.32□□□□□ -2.2
NPHP3Q7Z494 AC019288.1-201ENST00000557918 224 ntBASIC1.32□□□□□ -2.2
NPHP3Q7Z494 CYP3A52P-201ENST00000563326 91 ntBASIC1.32□□□□□ -2.2
NPHP3Q7Z494 AC005972.2-201ENST00000604690 348 ntBASIC1.32□□□□□ -2.2
NPHP3Q7Z494 SNORA28-201ENST00000606769 126 ntBASIC1.32□□□□□ -2.2
NPHP3Q7Z494 SNORD113-5-201ENST00000607261 78 ntBASIC1.32□□□□□ -2.2
NPHP3Q7Z494 AC068647.2-201ENST00000637380 353 ntBASIC1.32□□□□□ -2.2
NPHP3Q7Z494 RNU4-80P-201ENST00000363200 141 ntBASIC1.31□□□□□ -2.2
NPHP3Q7Z494 Y_RNA.153-201ENST00000363615 91 ntBASIC1.31□□□□□ -2.2
NPHP3Q7Z494 RNU6-424P-201ENST00000384367 105 ntBASIC1.31□□□□□ -2.2
NPHP3Q7Z494 MIR215-201ENST00000384858 110 ntBASIC1.31□□□□□ -2.2
NPHP3Q7Z494 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
NPHP3Q7Z494 POLR2KP2-201ENST00000438155 177 ntBASIC1.31□□□□□ -2.2
NPHP3Q7Z494 HMGN1P10-201ENST00000474557 553 ntBASIC1.31□□□□□ -2.2
NPHP3Q7Z494 RNY3P15-201ENST00000516297 97 ntBASIC1.31□□□□□ -2.2
NPHP3Q7Z494 AL512310.8-201ENST00000550183 120 ntBASIC1.31□□□□□ -2.2
NPHP3Q7Z494 AL513423.1-201ENST00000621695 132 ntBASIC1.31□□□□□ -2.2
NPHP3Q7Z494 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.31□□□□□ -2.2
NPHP3Q7Z494 MIRLET7C-201ENST00000362160 84 ntBASIC1.3□□□□□ -2.2
NPHP3Q7Z494 RNU4-76P-201ENST00000364509 141 ntBASIC1.3□□□□□ -2.2
NPHP3Q7Z494 Y_RNA.380-201ENST00000365663 111 ntBASIC1.3□□□□□ -2.2
NPHP3Q7Z494 MIR660-201ENST00000385235 97 ntBASIC1.3□□□□□ -2.2
NPHP3Q7Z494 RNU6-710P-201ENST00000410424 105 ntBASIC1.3□□□□□ -2.2
NPHP3Q7Z494 LINC01399-202ENST00000458450 244 ntBASIC1.3□□□□□ -2.2
NPHP3Q7Z494 RNU6-496P-201ENST00000516145 99 ntBASIC1.3□□□□□ -2.2
NPHP3Q7Z494 RNU7-28P-201ENST00000516759 62 ntBASIC1.3□□□□□ -2.2
NPHP3Q7Z494 SNORA40.15-201ENST00000516884 107 ntBASIC1.3□□□□□ -2.2
NPHP3Q7Z494 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
NPHP3Q7Z494 Y_RNA.19-201ENST00000362462 99 ntBASIC1.29□□□□□ -2.2
NPHP3Q7Z494 Y_RNA.30-201ENST00000362572 97 ntBASIC1.29□□□□□ -2.2
NPHP3Q7Z494 Y_RNA.64-201ENST00000362845 102 ntBASIC1.29□□□□□ -2.2
NPHP3Q7Z494 SNORD68-201ENST00000363214 84 ntBASIC1.29□□□□□ -2.2
NPHP3Q7Z494 RNU6-770P-201ENST00000363929 105 ntBASIC1.29□□□□□ -2.2
NPHP3Q7Z494 RNU6-1048P-201ENST00000364054 107 ntBASIC1.29□□□□□ -2.2
NPHP3Q7Z494 Y_RNA.222-201ENST00000364264 102 ntBASIC1.29□□□□□ -2.2
NPHP3Q7Z494 Y_RNA.368-201ENST00000365547 113 ntBASIC1.29□□□□□ -2.2
NPHP3Q7Z494 AC117470.1-201ENST00000381974 330 ntBASIC1.29□□□□□ -2.2
NPHP3Q7Z494 Y_RNA.418-201ENST00000384029 102 ntBASIC1.29□□□□□ -2.2
NPHP3Q7Z494 RNA5SP482-201ENST00000391269 118 ntBASIC1.29□□□□□ -2.2
NPHP3Q7Z494 AC113618.1-201ENST00000416747 285 ntBASIC1.29□□□□□ -2.2
NPHP3Q7Z494 RPL21P38-201ENST00000418090 167 ntBASIC1.29□□□□□ -2.2
NPHP3Q7Z494 RPS29P28-201ENST00000446439 141 ntBASIC1.29□□□□□ -2.2
NPHP3Q7Z494 RNU7-12P-201ENST00000516030 62 ntBASIC1.29□□□□□ -2.2
NPHP3Q7Z494 RNU6-764P-201ENST00000516396 105 ntBASIC1.29□□□□□ -2.2
NPHP3Q7Z494 AL358944.1-201ENST00000528537 144 ntBASIC1.29□□□□□ -2.2
NPHP3Q7Z494 AP003072.1-201ENST00000531740 145 ntBASIC1.29□□□□□ -2.2
NPHP3Q7Z494 MIR4714-201ENST00000580728 77 ntBASIC1.29□□□□□ -2.2
NPHP3Q7Z494 AL355297.3-201ENST00000604082 446 ntBASIC1.29□□□□□ -2.2
NPHP3Q7Z494 AC108706.1-201ENST00000611053 297 ntBASIC1.29□□□□□ -2.2
NPHP3Q7Z494 AL591926.4-201ENST00000616895 298 ntBASIC1.29□□□□□ -2.2
NPHP3Q7Z494 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
NPHP3Q7Z494 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.28□□□□□ -2.2
NPHP3Q7Z494 snoU2_19.2-201ENST00000363024 80 ntBASIC1.28□□□□□ -2.2
NPHP3Q7Z494 U8.7-201ENST00000364940 136 ntBASIC1.28□□□□□ -2.2
NPHP3Q7Z494 Y_RNA.456-201ENST00000384232 111 ntBASIC1.28□□□□□ -2.2
NPHP3Q7Z494 RNU6-985P-201ENST00000410182 104 ntBASIC1.28□□□□□ -2.2
NPHP3Q7Z494 RNU2-14P-201ENST00000411053 191 ntBASIC1.28□□□□□ -2.2
NPHP3Q7Z494 AC117454.1-201ENST00000491120 168 ntBASIC1.28□□□□□ -2.2
NPHP3Q7Z494 RN7SKP88-201ENST00000516847 250 ntBASIC1.28□□□□□ -2.2
NPHP3Q7Z494 7SK.8-201ENST00000612110 250 ntBASIC1.28□□□□□ -2.2
NPHP3Q7Z494 7SK.11-201ENST00000615477 250 ntBASIC1.28□□□□□ -2.2
NPHP3Q7Z494 MIR8065-201ENST00000620577 100 ntBASIC1.28□□□□□ -2.2
NPHP3Q7Z494 7SK.13-201ENST00000622040 250 ntBASIC1.28□□□□□ -2.2
NPHP3Q7Z494 RNU6-694P-201ENST00000364071 147 ntBASIC1.27□□□□□ -2.21
NPHP3Q7Z494 RNU6-801P-201ENST00000364087 105 ntBASIC1.27□□□□□ -2.21
NPHP3Q7Z494 SNORA25.8-201ENST00000364831 128 ntBASIC1.27□□□□□ -2.21
NPHP3Q7Z494 RNU6-639P-201ENST00000384074 107 ntBASIC1.27□□□□□ -2.21
NPHP3Q7Z494 MIR193B-201ENST00000384907 83 ntBASIC1.27□□□□□ -2.21
NPHP3Q7Z494 MLLT10P1-201ENST00000418346 262 ntBASIC1.27□□□□□ -2.21
NPHP3Q7Z494 PIGPP3-201ENST00000425307 415 ntBASIC1.27□□□□□ -2.21
NPHP3Q7Z494 AC024067.1-201ENST00000426199 223 ntBASIC1.27□□□□□ -2.21
NPHP3Q7Z494 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.27□□□□□ -2.21
NPHP3Q7Z494 POLR3GP1-201ENST00000594073 261 ntBASIC1.27□□□□□ -2.21
NPHP3Q7Z494 AC134026.1-201ENST00000623249 2239 ntBASIC1.26□□□□□ -2.21
NPHP3Q7Z494 RNA5SP327-201ENST00000362494 101 ntBASIC1.26□□□□□ -2.21
NPHP3Q7Z494 RNU4-90P-201ENST00000362773 141 ntBASIC1.26□□□□□ -2.21
NPHP3Q7Z494 RNU6-1323P-201ENST00000384025 107 ntBASIC1.26□□□□□ -2.21
NPHP3Q7Z494 SNORA72-201ENST00000384339 132 ntBASIC1.26□□□□□ -2.21
NPHP3Q7Z494 Y_RNA.541-201ENST00000384640 113 ntBASIC1.26□□□□□ -2.21
NPHP3Q7Z494 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
NPHP3Q7Z494 Y_RNA.581-201ENST00000391017 97 ntBASIC1.26□□□□□ -2.21
NPHP3Q7Z494 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.26□□□□□ -2.21
NPHP3Q7Z494 MRPS35P2-201ENST00000508242 191 ntBASIC1.26□□□□□ -2.21
NPHP3Q7Z494 RNU6-191P-201ENST00000516295 94 ntBASIC1.26□□□□□ -2.21
NPHP3Q7Z494 AC024405.2-202ENST00000532731 184 ntBASIC1.26□□□□□ -2.21
NPHP3Q7Z494 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.26□□□□□ -2.21
NPHP3Q7Z494 AL442644.1-201ENST00000454390 3105 ntBASIC1.26□□□□□ -2.21
NPHP3Q7Z494 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
NPHP3Q7Z494 Y_RNA.253-201ENST00000364562 112 ntBASIC1.25□□□□□ -2.21
NPHP3Q7Z494 Y_RNA.569-201ENST00000384749 103 ntBASIC1.25□□□□□ -2.21
NPHP3Q7Z494 SNORA26.5-201ENST00000391215 123 ntBASIC1.25□□□□□ -2.21
NPHP3Q7Z494 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.25□□□□□ -2.21
NPHP3Q7Z494 AC104332.1-201ENST00000440471 797 ntBASIC1.25□□□□□ -2.21
NPHP3Q7Z494 DYNLT3P2-201ENST00000442517 295 ntBASIC1.25□□□□□ -2.21
NPHP3Q7Z494 MTND5P22-201ENST00000458380 195 ntBASIC1.25□□□□□ -2.21
NPHP3Q7Z494 RNU6-917P-201ENST00000516294 104 ntBASIC1.25□□□□□ -2.21
NPHP3Q7Z494 RNU7-115P-201ENST00000516433 55 ntBASIC1.25□□□□□ -2.21
NPHP3Q7Z494 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.25□□□□□ -2.21
NPHP3Q7Z494 MIR4698-201ENST00000577795 80 ntBASIC1.25□□□□□ -2.21
NPHP3Q7Z494 MIR3664-201ENST00000579074 99 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms