Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 EIF4BP1-201ENST00000554881 351 ntBASIC2.61□□□□□ -1.99
RNF111Q6ZNA4 AC026271.5-201ENST00000577873 130 ntBASIC2.61□□□□□ -1.99
RNF111Q6ZNA4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.61□□□□□ -1.99
RNF111Q6ZNA4 AL137847.3-201ENST00000611521 109 ntBASIC2.61□□□□□ -1.99
RNF111Q6ZNA4 uc_338.28-201ENST00000612082 187 ntBASIC2.61□□□□□ -1.99
RNF111Q6ZNA4 AC022513.1-201ENST00000624512 117 ntBASIC2.61□□□□□ -1.99
RNF111Q6ZNA4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.61□□□□□ -1.99
RNF111Q6ZNA4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
RNF111Q6ZNA4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
RNF111Q6ZNA4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RNF111Q6ZNA4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.6□□□□□ -1.99
RNF111Q6ZNA4 Y_RNA.43-201ENST00000362670 111 ntBASIC2.6□□□□□ -1.99
RNF111Q6ZNA4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
RNF111Q6ZNA4 DEFA7P-201ENST00000382676 285 ntBASIC2.6□□□□□ -1.99
RNF111Q6ZNA4 Y_RNA.547-201ENST00000384654 119 ntBASIC2.6□□□□□ -1.99
RNF111Q6ZNA4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.6□□□□□ -1.99
RNF111Q6ZNA4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.6□□□□□ -1.99
RNF111Q6ZNA4 RNA5SP367-201ENST00000516557 118 ntBASIC2.6□□□□□ -1.99
RNF111Q6ZNA4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.6□□□□□ -1.99
RNF111Q6ZNA4 ZNF861P-201ENST00000588126 639 ntBASIC2.6□□□□□ -1.99
RNF111Q6ZNA4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RNF111Q6ZNA4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RNF111Q6ZNA4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RNF111Q6ZNA4 Y_RNA.37-201ENST00000362606 108 ntBASIC2.59□□□□□ -1.99
RNF111Q6ZNA4 Y_RNA.116-201ENST00000363292 103 ntBASIC2.59□□□□□ -1.99
RNF111Q6ZNA4 SNORD115-28-201ENST00000363931 81 ntBASIC2.59□□□□□ -1.99
RNF111Q6ZNA4 Y_RNA.410-201ENST00000383992 113 ntBASIC2.59□□□□□ -1.99
RNF111Q6ZNA4 RNA5SP482-201ENST00000391269 118 ntBASIC2.59□□□□□ -1.99
RNF111Q6ZNA4 RNA5SP181-201ENST00000410246 98 ntBASIC2.59□□□□□ -1.99
RNF111Q6ZNA4 RNA5SP136-201ENST00000410906 107 ntBASIC2.59□□□□□ -1.99
RNF111Q6ZNA4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.59□□□□□ -1.99
RNF111Q6ZNA4 AC092427.1-202ENST00000430569 476 ntBASIC2.59□□□□□ -1.99
RNF111Q6ZNA4 AL445646.1-201ENST00000431784 216 ntBASIC2.59□□□□□ -1.99
RNF111Q6ZNA4 SNRPGP14-201ENST00000435400 219 ntBASIC2.59□□□□□ -1.99
RNF111Q6ZNA4 STAG3L5P-204ENST00000443759 179 ntBASIC2.59□□□□□ -1.99
RNF111Q6ZNA4 SNORD36C-201ENST00000516733 66 ntBASIC2.59□□□□□ -1.99
RNF111Q6ZNA4 MIR7106-201ENST00000612419 65 ntBASIC2.59□□□□□ -1.99
RNF111Q6ZNA4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RNF111Q6ZNA4 RNU6-1255P-201ENST00000363434 112 ntBASIC2.58□□□□□ -2
RNF111Q6ZNA4 RNU1-91P-201ENST00000364746 163 ntBASIC2.58□□□□□ -2
RNF111Q6ZNA4 SNORA80E-201ENST00000384744 137 ntBASIC2.58□□□□□ -2
RNF111Q6ZNA4 MIR570-201ENST00000384917 97 ntBASIC2.58□□□□□ -2
RNF111Q6ZNA4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.58□□□□□ -2
RNF111Q6ZNA4 SNORA11.2-201ENST00000408318 127 ntBASIC2.58□□□□□ -2
RNF111Q6ZNA4 SNORA11.4-201ENST00000408823 129 ntBASIC2.58□□□□□ -2
RNF111Q6ZNA4 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.58□□□□□ -2
RNF111Q6ZNA4 AC105272.1-201ENST00000438604 198 ntBASIC2.58□□□□□ -2
RNF111Q6ZNA4 Z96811.1-201ENST00000445880 108 ntBASIC2.58□□□□□ -2
RNF111Q6ZNA4 RNU6-56P-201ENST00000516986 93 ntBASIC2.58□□□□□ -2
RNF111Q6ZNA4 AC007012.1-201ENST00000567192 175 ntBASIC2.58□□□□□ -2
RNF111Q6ZNA4 ELOCP29-201ENST00000588193 334 ntBASIC2.58□□□□□ -2
RNF111Q6ZNA4 AL449363.1-201ENST00000617815 186 ntBASIC2.58□□□□□ -2
RNF111Q6ZNA4 AC015726.2-201ENST00000620112 122 ntBASIC2.58□□□□□ -2
RNF111Q6ZNA4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.58□□□□□ -2
RNF111Q6ZNA4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
RNF111Q6ZNA4 RNU6-690P-201ENST00000365242 106 ntBASIC2.57□□□□□ -2
RNF111Q6ZNA4 RNU6-440P-201ENST00000390882 105 ntBASIC2.57□□□□□ -2
RNF111Q6ZNA4 AL138827.1-201ENST00000402666 306 ntBASIC2.57□□□□□ -2
RNF111Q6ZNA4 AL031737.1-201ENST00000450125 223 ntBASIC2.57□□□□□ -2
RNF111Q6ZNA4 RNU7-70P-201ENST00000516941 66 ntBASIC2.57□□□□□ -2
RNF111Q6ZNA4 RNA5SP402-201ENST00000517148 110 ntBASIC2.57□□□□□ -2
RNF111Q6ZNA4 RNU6-1116P-201ENST00000517269 99 ntBASIC2.57□□□□□ -2
RNF111Q6ZNA4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.57□□□□□ -2
RNF111Q6ZNA4 SNORA80A-201ENST00000363922 136 ntBASIC2.56□□□□□ -2
RNF111Q6ZNA4 Y_RNA.336-201ENST00000365307 109 ntBASIC2.56□□□□□ -2
RNF111Q6ZNA4 Y_RNA.549-201ENST00000384657 102 ntBASIC2.56□□□□□ -2
RNF111Q6ZNA4 MIR634-201ENST00000385208 97 ntBASIC2.56□□□□□ -2
RNF111Q6ZNA4 RNA5SP210-201ENST00000391034 120 ntBASIC2.56□□□□□ -2
RNF111Q6ZNA4 BX510359.4-201ENST00000423750 193 ntBASIC2.56□□□□□ -2
RNF111Q6ZNA4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.56□□□□□ -2
RNF111Q6ZNA4 RNU7-26P-201ENST00000458980 63 ntBASIC2.56□□□□□ -2
RNF111Q6ZNA4 COX6CP6-201ENST00000490840 228 ntBASIC2.56□□□□□ -2
RNF111Q6ZNA4 RPS26P48-201ENST00000491713 339 ntBASIC2.56□□□□□ -2
RNF111Q6ZNA4 RNU7-28P-201ENST00000516759 62 ntBASIC2.56□□□□□ -2
RNF111Q6ZNA4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.56□□□□□ -2
RNF111Q6ZNA4 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.56□□□□□ -2
RNF111Q6ZNA4 MIR8054-201ENST00000620877 86 ntBASIC2.56□□□□□ -2
RNF111Q6ZNA4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.55□□□□□ -2
RNF111Q6ZNA4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.55□□□□□ -2
RNF111Q6ZNA4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.55□□□□□ -2
RNF111Q6ZNA4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RNF111Q6ZNA4 RNU1-58P-201ENST00000362413 163 ntBASIC2.55□□□□□ -2
RNF111Q6ZNA4 RNU6-1107P-201ENST00000364817 104 ntBASIC2.55□□□□□ -2
RNF111Q6ZNA4 Y_RNA.309-201ENST00000365046 111 ntBASIC2.55□□□□□ -2
RNF111Q6ZNA4 Y_RNA.495-201ENST00000384435 112 ntBASIC2.55□□□□□ -2
RNF111Q6ZNA4 SNORD12C-201ENST00000386307 89 ntBASIC2.55□□□□□ -2
RNF111Q6ZNA4 RNA5SP21-201ENST00000410917 96 ntBASIC2.55□□□□□ -2
RNF111Q6ZNA4 RNU6-938P-201ENST00000411285 103 ntBASIC2.55□□□□□ -2
RNF111Q6ZNA4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.55□□□□□ -2
RNF111Q6ZNA4 UBBP3-201ENST00000445497 241 ntBASIC2.55□□□□□ -2
RNF111Q6ZNA4 AC114811.1-201ENST00000507207 168 ntBASIC2.55□□□□□ -2
RNF111Q6ZNA4 RNU6-412P-201ENST00000516434 106 ntBASIC2.55□□□□□ -2
RNF111Q6ZNA4 GTF3AP2-201ENST00000557014 266 ntBASIC2.55□□□□□ -2
RNF111Q6ZNA4 MIR3126-201ENST00000577443 74 ntBASIC2.55□□□□□ -2
RNF111Q6ZNA4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.55□□□□□ -2
RNF111Q6ZNA4 AC005786.1-201ENST00000588553 154 ntBASIC2.55□□□□□ -2
RNF111Q6ZNA4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
RNF111Q6ZNA4 ZNF720P1-201ENST00000562403 1939 ntBASIC2.54□□□□□ -2
RNF111Q6ZNA4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RNF111Q6ZNA4 Y_RNA.281-201ENST00000364774 94 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms