Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AL603914.1-201ENST00000401964 204 ntBASIC3.06□□□□□ -1.92
PRPF40BQ6NWY9 MIR1262-201ENST00000408276 93 ntBASIC3.06□□□□□ -1.92
PRPF40BQ6NWY9 CST2P1-201ENST00000425770 87 ntBASIC3.06□□□□□ -1.92
PRPF40BQ6NWY9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.06□□□□□ -1.92
PRPF40BQ6NWY9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.06□□□□□ -1.92
PRPF40BQ6NWY9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
PRPF40BQ6NWY9 MTATP6P21-201ENST00000440681 189 ntBASIC3.06□□□□□ -1.92
PRPF40BQ6NWY9 AL158147.1-201ENST00000443970 75 ntBASIC3.06□□□□□ -1.92
PRPF40BQ6NWY9 AL049830.1-201ENST00000468034 425 ntBASIC3.06□□□□□ -1.92
PRPF40BQ6NWY9 AC026271.5-201ENST00000577873 130 ntBASIC3.06□□□□□ -1.92
PRPF40BQ6NWY9 AC008507.4-201ENST00000585464 127 ntBASIC3.06□□□□□ -1.92
PRPF40BQ6NWY9 AL591926.4-201ENST00000616895 298 ntBASIC3.06□□□□□ -1.92
PRPF40BQ6NWY9 AP006437.1-201ENST00000641440 3685 ntBASIC3.06□□□□□ -1.92
PRPF40BQ6NWY9 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PRPF40BQ6NWY9 SNORA1B-201ENST00000362535 133 ntBASIC3.05□□□□□ -1.92
PRPF40BQ6NWY9 SNORD115-3-201ENST00000363100 82 ntBASIC3.05□□□□□ -1.92
PRPF40BQ6NWY9 RNU6-23P-201ENST00000363283 107 ntBASIC3.05□□□□□ -1.92
PRPF40BQ6NWY9 SNORD72-201ENST00000390994 80 ntBASIC3.05□□□□□ -1.92
PRPF40BQ6NWY9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.05□□□□□ -1.92
PRPF40BQ6NWY9 UBBP3-201ENST00000445497 241 ntBASIC3.05□□□□□ -1.92
PRPF40BQ6NWY9 RNA5SP281-201ENST00000516504 135 ntBASIC3.05□□□□□ -1.92
PRPF40BQ6NWY9 AC046143.2-201ENST00000609789 160 ntBASIC3.05□□□□□ -1.92
PRPF40BQ6NWY9 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.05□□□□□ -1.92
PRPF40BQ6NWY9 U6.95-201ENST00000636931 70 ntBASIC3.05□□□□□ -1.92
PRPF40BQ6NWY9 U6.108-201ENST00000637764 58 ntBASIC3.05□□□□□ -1.92
PRPF40BQ6NWY9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PRPF40BQ6NWY9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
PRPF40BQ6NWY9 MAPK10-266ENST00000641066 6555 ntBASIC3.05□□□□□ -1.92
PRPF40BQ6NWY9 SNORD114-1-201ENST00000362705 72 ntBASIC3.04□□□□□ -1.92
PRPF40BQ6NWY9 RNU6-862P-201ENST00000362804 105 ntBASIC3.04□□□□□ -1.92
PRPF40BQ6NWY9 RNA5SP99-201ENST00000364020 114 ntBASIC3.04□□□□□ -1.92
PRPF40BQ6NWY9 RNU6-647P-201ENST00000364243 107 ntBASIC3.04□□□□□ -1.92
PRPF40BQ6NWY9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PRPF40BQ6NWY9 MIR3121-201ENST00000579680 77 ntBASIC3.04□□□□□ -1.92
PRPF40BQ6NWY9 AC103810.6-201ENST00000606708 136 ntBASIC3.04□□□□□ -1.92
PRPF40BQ6NWY9 MIR7111-201ENST00000619751 72 ntBASIC3.04□□□□□ -1.92
PRPF40BQ6NWY9 MIR3914-2-201ENST00000637339 95 ntBASIC3.04□□□□□ -1.92
PRPF40BQ6NWY9 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PRPF40BQ6NWY9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.03□□□□□ -1.92
PRPF40BQ6NWY9 SNORD68-201ENST00000363214 84 ntBASIC3.03□□□□□ -1.92
PRPF40BQ6NWY9 RNU6-1144P-201ENST00000384247 104 ntBASIC3.03□□□□□ -1.92
PRPF40BQ6NWY9 AL117342.1-201ENST00000404861 406 ntBASIC3.03□□□□□ -1.92
PRPF40BQ6NWY9 RPS26P45-201ENST00000471748 340 ntBASIC3.03□□□□□ -1.92
PRPF40BQ6NWY9 AL163195.1-201ENST00000496941 348 ntBASIC3.03□□□□□ -1.92
PRPF40BQ6NWY9 RNU6-826P-201ENST00000516827 104 ntBASIC3.03□□□□□ -1.92
PRPF40BQ6NWY9 MIR6129-201ENST00000616087 109 ntBASIC3.03□□□□□ -1.92
PRPF40BQ6NWY9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PRPF40BQ6NWY9 RNA5SP493-201ENST00000364115 91 ntBASIC3.02□□□□□ -1.93
PRPF40BQ6NWY9 SNORD24-201ENST00000383884 75 ntBASIC3.02□□□□□ -1.93
PRPF40BQ6NWY9 SNORA1-201ENST00000384107 130 ntBASIC3.02□□□□□ -1.93
PRPF40BQ6NWY9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.02□□□□□ -1.93
PRPF40BQ6NWY9 SNORA40.5-201ENST00000391061 128 ntBASIC3.02□□□□□ -1.93
PRPF40BQ6NWY9 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.02□□□□□ -1.93
PRPF40BQ6NWY9 SNORA11.4-201ENST00000408823 129 ntBASIC3.02□□□□□ -1.93
PRPF40BQ6NWY9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.02□□□□□ -1.93
PRPF40BQ6NWY9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.02□□□□□ -1.93
PRPF40BQ6NWY9 SNRPGP13-201ENST00000442212 177 ntBASIC3.02□□□□□ -1.93
PRPF40BQ6NWY9 RNU6-693P-201ENST00000516134 107 ntBASIC3.02□□□□□ -1.93
PRPF40BQ6NWY9 Y_RNA.666-201ENST00000516187 112 ntBASIC3.02□□□□□ -1.93
PRPF40BQ6NWY9 RNU2-60P-201ENST00000517290 128 ntBASIC3.02□□□□□ -1.93
PRPF40BQ6NWY9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.02□□□□□ -1.93
PRPF40BQ6NWY9 ICE2P2-201ENST00000483823 2787 ntBASIC3.01□□□□□ -1.93
PRPF40BQ6NWY9 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.01□□□□□ -1.93
PRPF40BQ6NWY9 RNU6-309P-201ENST00000364573 106 ntBASIC3.01□□□□□ -1.93
PRPF40BQ6NWY9 RNU1-91P-201ENST00000364746 163 ntBASIC3.01□□□□□ -1.93
PRPF40BQ6NWY9 SNORD61-201ENST00000384252 73 ntBASIC3.01□□□□□ -1.93
PRPF40BQ6NWY9 MIR891A-201ENST00000401237 79 ntBASIC3.01□□□□□ -1.93
PRPF40BQ6NWY9 AF228730.3-201ENST00000436691 102 ntBASIC3.01□□□□□ -1.93
PRPF40BQ6NWY9 RPS12P2-201ENST00000439728 269 ntBASIC3.01□□□□□ -1.93
PRPF40BQ6NWY9 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.01□□□□□ -1.93
PRPF40BQ6NWY9 RNU6-548P-201ENST00000517083 115 ntBASIC3.01□□□□□ -1.93
PRPF40BQ6NWY9 MIR5092-201ENST00000583139 88 ntBASIC3.01□□□□□ -1.93
PRPF40BQ6NWY9 AL022345.2-201ENST00000606307 135 ntBASIC3.01□□□□□ -1.93
PRPF40BQ6NWY9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRPF40BQ6NWY9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PRPF40BQ6NWY9 RNU6-888P-201ENST00000363010 101 ntBASIC3□□□□□ -1.93
PRPF40BQ6NWY9 SNORD14E-201ENST00000364009 85 ntBASIC3□□□□□ -1.93
PRPF40BQ6NWY9 SNORD56.5-201ENST00000364281 72 ntBASIC3□□□□□ -1.93
PRPF40BQ6NWY9 Y_RNA.280-201ENST00000364765 112 ntBASIC3□□□□□ -1.93
PRPF40BQ6NWY9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3□□□□□ -1.93
PRPF40BQ6NWY9 RNU6-56P-201ENST00000516986 93 ntBASIC3□□□□□ -1.93
PRPF40BQ6NWY9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3□□□□□ -1.93
PRPF40BQ6NWY9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
PRPF40BQ6NWY9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.99□□□□□ -1.93
PRPF40BQ6NWY9 RNU6-1084P-201ENST00000362498 107 ntBASIC2.99□□□□□ -1.93
PRPF40BQ6NWY9 SNORA38-201ENST00000363946 132 ntBASIC2.99□□□□□ -1.93
PRPF40BQ6NWY9 MIR522-201ENST00000385071 87 ntBASIC2.99□□□□□ -1.93
PRPF40BQ6NWY9 FTH1P12-201ENST00000432137 551 ntBASIC2.99□□□□□ -1.93
PRPF40BQ6NWY9 SNORD33.1-201ENST00000516213 88 ntBASIC2.99□□□□□ -1.93
PRPF40BQ6NWY9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.99□□□□□ -1.93
PRPF40BQ6NWY9 CYCSP26-201ENST00000534107 320 ntBASIC2.99□□□□□ -1.93
PRPF40BQ6NWY9 AC004486.1-201ENST00000546846 233 ntBASIC2.99□□□□□ -1.93
PRPF40BQ6NWY9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PRPF40BQ6NWY9 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PRPF40BQ6NWY9 MTND5P32-201ENST00000560711 1802 ntBASIC2.98□□□□□ -1.93
PRPF40BQ6NWY9 RNA5SP456-201ENST00000364002 114 ntBASIC2.98□□□□□ -1.93
PRPF40BQ6NWY9 RNU6-153P-201ENST00000364422 104 ntBASIC2.98□□□□□ -1.93
PRPF40BQ6NWY9 RNU6-1292P-201ENST00000383856 107 ntBASIC2.98□□□□□ -1.93
PRPF40BQ6NWY9 RNU6-442P-201ENST00000383968 104 ntBASIC2.98□□□□□ -1.93
PRPF40BQ6NWY9 RNU6-429P-201ENST00000384582 108 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms