Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RN7SKP132-201ENST00000516001 208 ntBASIC3.03□□□□□ -1.92
RNF43Q68DV7 RNU7-70P-201ENST00000516941 66 ntBASIC3.03□□□□□ -1.92
RNF43Q68DV7 AC087685.1-201ENST00000587507 141 ntBASIC3.03□□□□□ -1.92
RNF43Q68DV7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
RNF43Q68DV7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RNF43Q68DV7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
RNF43Q68DV7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
RNF43Q68DV7 RNY1P6-201ENST00000384193 109 ntBASIC3.02□□□□□ -1.93
RNF43Q68DV7 AL109933.2-201ENST00000452651 260 ntBASIC3.02□□□□□ -1.93
RNF43Q68DV7 SCARNA17.1-201ENST00000516211 143 ntBASIC3.02□□□□□ -1.93
RNF43Q68DV7 RNU7-99P-201ENST00000516271 62 ntBASIC3.02□□□□□ -1.93
RNF43Q68DV7 SCARNA17.2-201ENST00000516334 143 ntBASIC3.02□□□□□ -1.93
RNF43Q68DV7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.02□□□□□ -1.93
RNF43Q68DV7 RNA5SP395-201ENST00000516567 118 ntBASIC3.02□□□□□ -1.93
RNF43Q68DV7 RNU6-856P-201ENST00000516959 98 ntBASIC3.02□□□□□ -1.93
RNF43Q68DV7 RNU7-128P-201ENST00000517247 62 ntBASIC3.02□□□□□ -1.93
RNF43Q68DV7 FAM71BP1-201ENST00000604431 523 ntBASIC3.02□□□□□ -1.93
RNF43Q68DV7 SCARNA17.4-201ENST00000614296 143 ntBASIC3.02□□□□□ -1.93
RNF43Q68DV7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.02□□□□□ -1.93
RNF43Q68DV7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.02□□□□□ -1.93
RNF43Q68DV7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RNF43Q68DV7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RNF43Q68DV7 AC018630.2-201ENST00000534866 2403 ntBASIC3.01□□□□□ -1.93
RNF43Q68DV7 RNU1-105P-201ENST00000363470 161 ntBASIC3.01□□□□□ -1.93
RNF43Q68DV7 SNORA14A-201ENST00000364773 135 ntBASIC3.01□□□□□ -1.93
RNF43Q68DV7 MIR522-201ENST00000385071 87 ntBASIC3.01□□□□□ -1.93
RNF43Q68DV7 MIR802-201ENST00000390235 94 ntBASIC3.01□□□□□ -1.93
RNF43Q68DV7 SNORA26.7-201ENST00000391288 122 ntBASIC3.01□□□□□ -1.93
RNF43Q68DV7 MIR1912-201ENST00000410389 80 ntBASIC3.01□□□□□ -1.93
RNF43Q68DV7 AC009414.1-201ENST00000427200 443 ntBASIC3.01□□□□□ -1.93
RNF43Q68DV7 FTH1P12-201ENST00000432137 551 ntBASIC3.01□□□□□ -1.93
RNF43Q68DV7 AC108938.1-201ENST00000451204 136 ntBASIC3.01□□□□□ -1.93
RNF43Q68DV7 RPL39P39-201ENST00000455840 151 ntBASIC3.01□□□□□ -1.93
RNF43Q68DV7 RNU7-25P-201ENST00000516544 62 ntBASIC3.01□□□□□ -1.93
RNF43Q68DV7 Y_RNA.714-201ENST00000517065 90 ntBASIC3.01□□□□□ -1.93
RNF43Q68DV7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.01□□□□□ -1.93
RNF43Q68DV7 AC107016.2-201ENST00000547968 190 ntBASIC3.01□□□□□ -1.93
RNF43Q68DV7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.01□□□□□ -1.93
RNF43Q68DV7 MIR4305-201ENST00000583252 102 ntBASIC3.01□□□□□ -1.93
RNF43Q68DV7 AC007229.1-201ENST00000590455 412 ntBASIC3.01□□□□□ -1.93
RNF43Q68DV7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.01□□□□□ -1.93
RNF43Q68DV7 MIR3202-2-201ENST00000635980 79 ntBASIC3.01□□□□□ -1.93
RNF43Q68DV7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.01□□□□□ -1.93
RNF43Q68DV7 FAM35CP-201ENST00000554755 2470 ntBASIC3.01□□□□□ -1.93
RNF43Q68DV7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
RNF43Q68DV7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3□□□□□ -1.93
RNF43Q68DV7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RNF43Q68DV7 Y_RNA.37-201ENST00000362606 108 ntBASIC3□□□□□ -1.93
RNF43Q68DV7 RNY1P1-201ENST00000364372 112 ntBASIC3□□□□□ -1.93
RNF43Q68DV7 RNU1-133P-201ENST00000364867 167 ntBASIC3□□□□□ -1.93
RNF43Q68DV7 SNORA9.2-201ENST00000365361 133 ntBASIC3□□□□□ -1.93
RNF43Q68DV7 RNU6-1083P-201ENST00000384022 107 ntBASIC3□□□□□ -1.93
RNF43Q68DV7 RNU1-101P-201ENST00000391171 127 ntBASIC3□□□□□ -1.93
RNF43Q68DV7 RNU1-131P-201ENST00000458943 161 ntBASIC3□□□□□ -1.93
RNF43Q68DV7 UBL5P3-201ENST00000475112 231 ntBASIC3□□□□□ -1.93
RNF43Q68DV7 RNU2-13P-201ENST00000515909 113 ntBASIC3□□□□□ -1.93
RNF43Q68DV7 RNU2-35P-201ENST00000516446 142 ntBASIC3□□□□□ -1.93
RNF43Q68DV7 SNORD36C-201ENST00000516733 66 ntBASIC3□□□□□ -1.93
RNF43Q68DV7 RNU7-6P-201ENST00000516845 62 ntBASIC3□□□□□ -1.93
RNF43Q68DV7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3□□□□□ -1.93
RNF43Q68DV7 AC022254.1-201ENST00000567857 235 ntBASIC3□□□□□ -1.93
RNF43Q68DV7 AL359075.3-201ENST00000613288 217 ntBASIC3□□□□□ -1.93
RNF43Q68DV7 MIR6079-201ENST00000635807 62 ntBASIC3□□□□□ -1.93
RNF43Q68DV7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3□□□□□ -1.93
RNF43Q68DV7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RNF43Q68DV7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RNF43Q68DV7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RNF43Q68DV7 MIR340-201ENST00000362125 95 ntBASIC2.99□□□□□ -1.93
RNF43Q68DV7 RNU6-1099P-201ENST00000363533 107 ntBASIC2.99□□□□□ -1.93
RNF43Q68DV7 SNORD115-28-201ENST00000363931 81 ntBASIC2.99□□□□□ -1.93
RNF43Q68DV7 RNU6-546P-201ENST00000383991 107 ntBASIC2.99□□□□□ -1.93
RNF43Q68DV7 RNA5SP467-201ENST00000391274 118 ntBASIC2.99□□□□□ -1.93
RNF43Q68DV7 AC123900.1-201ENST00000420390 96 ntBASIC2.99□□□□□ -1.93
RNF43Q68DV7 AL353689.1-201ENST00000438895 199 ntBASIC2.99□□□□□ -1.93
RNF43Q68DV7 AC093259.1-201ENST00000509755 300 ntBASIC2.99□□□□□ -1.93
RNF43Q68DV7 RNU7-61P-201ENST00000515897 61 ntBASIC2.99□□□□□ -1.93
RNF43Q68DV7 RNU6-341P-201ENST00000516973 96 ntBASIC2.99□□□□□ -1.93
RNF43Q68DV7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.99□□□□□ -1.93
RNF43Q68DV7 IGLL4P-201ENST00000614590 133 ntBASIC2.99□□□□□ -1.93
RNF43Q68DV7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RNF43Q68DV7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
RNF43Q68DV7 AC080128.1-201ENST00000474389 1917 ntBASIC2.98□□□□□ -1.93
RNF43Q68DV7 snoU2-30.2-201ENST00000362805 70 ntBASIC2.98□□□□□ -1.93
RNF43Q68DV7 SNORA33-201ENST00000363664 130 ntBASIC2.98□□□□□ -1.93
RNF43Q68DV7 RNU6-497P-201ENST00000365316 104 ntBASIC2.98□□□□□ -1.93
RNF43Q68DV7 Y_RNA.547-201ENST00000384654 119 ntBASIC2.98□□□□□ -1.93
RNF43Q68DV7 MIR196B-201ENST00000384852 84 ntBASIC2.98□□□□□ -1.93
RNF43Q68DV7 Y_RNA.601-201ENST00000410500 113 ntBASIC2.98□□□□□ -1.93
RNF43Q68DV7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.98□□□□□ -1.93
RNF43Q68DV7 RN7SL297P-201ENST00000483161 293 ntBASIC2.98□□□□□ -1.93
RNF43Q68DV7 RNU6-162P-201ENST00000516228 103 ntBASIC2.98□□□□□ -1.93
RNF43Q68DV7 HSPE1P19-201ENST00000603327 295 ntBASIC2.98□□□□□ -1.93
RNF43Q68DV7 AC006441.5-201ENST00000612680 209 ntBASIC2.98□□□□□ -1.93
RNF43Q68DV7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RNF43Q68DV7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RNF43Q68DV7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RNF43Q68DV7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
RNF43Q68DV7 Y_RNA.73-201ENST00000362910 113 ntBASIC2.97□□□□□ -1.93
RNF43Q68DV7 Y_RNA.221-201ENST00000364248 96 ntBASIC2.97□□□□□ -1.93
RNF43Q68DV7 Y_RNA.332-201ENST00000365271 113 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 189.6 ms