Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AL139156.1-201ENST00000412785 841 ntBASIC2.34□□□□□ -2.03
CCDC144BQ3MJ40 AL161935.2-201ENST00000414627 60 ntBASIC2.34□□□□□ -2.03
CCDC144BQ3MJ40 CALM2P4-201ENST00000430810 426 ntBASIC2.34□□□□□ -2.03
CCDC144BQ3MJ40 HMGN2P32-201ENST00000444648 269 ntBASIC2.34□□□□□ -2.03
CCDC144BQ3MJ40 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC144BQ3MJ40 RNU7-12P-201ENST00000516030 62 ntBASIC2.34□□□□□ -2.03
CCDC144BQ3MJ40 RNA5SP458-201ENST00000516188 119 ntBASIC2.34□□□□□ -2.03
CCDC144BQ3MJ40 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC144BQ3MJ40 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.34□□□□□ -2.03
CCDC144BQ3MJ40 MIR6845-201ENST00000613182 61 ntBASIC2.34□□□□□ -2.03
CCDC144BQ3MJ40 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC144BQ3MJ40 RNU6-653P-201ENST00000363074 106 ntBASIC2.33□□□□□ -2.04
CCDC144BQ3MJ40 RNU6-833P-201ENST00000363486 107 ntBASIC2.33□□□□□ -2.04
CCDC144BQ3MJ40 RNU6-203P-201ENST00000384038 104 ntBASIC2.33□□□□□ -2.04
CCDC144BQ3MJ40 RNU4-52P-201ENST00000384209 138 ntBASIC2.33□□□□□ -2.04
CCDC144BQ3MJ40 MIR891A-201ENST00000401237 79 ntBASIC2.33□□□□□ -2.04
CCDC144BQ3MJ40 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.33□□□□□ -2.04
CCDC144BQ3MJ40 CYCSP49-201ENST00000420810 319 ntBASIC2.33□□□□□ -2.04
CCDC144BQ3MJ40 RN7SKP164-201ENST00000516138 266 ntBASIC2.33□□□□□ -2.04
CCDC144BQ3MJ40 RNU6-126P-201ENST00000516685 103 ntBASIC2.33□□□□□ -2.04
CCDC144BQ3MJ40 RNU6-388P-201ENST00000517012 105 ntBASIC2.33□□□□□ -2.04
CCDC144BQ3MJ40 RNU6-389P-201ENST00000517048 105 ntBASIC2.33□□□□□ -2.04
CCDC144BQ3MJ40 Y_RNA.783-201ENST00000613546 102 ntBASIC2.33□□□□□ -2.04
CCDC144BQ3MJ40 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CCDC144BQ3MJ40 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CCDC144BQ3MJ40 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CCDC144BQ3MJ40 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC144BQ3MJ40 MIRLET7C-201ENST00000362160 84 ntBASIC2.32□□□□□ -2.04
CCDC144BQ3MJ40 Y_RNA.83-201ENST00000363005 113 ntBASIC2.32□□□□□ -2.04
CCDC144BQ3MJ40 RNY3P5-201ENST00000384127 102 ntBASIC2.32□□□□□ -2.04
CCDC144BQ3MJ40 MIR802-201ENST00000390235 94 ntBASIC2.32□□□□□ -2.04
CCDC144BQ3MJ40 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.32□□□□□ -2.04
CCDC144BQ3MJ40 SNORD11-201ENST00000459124 84 ntBASIC2.32□□□□□ -2.04
CCDC144BQ3MJ40 SNORA77B-201ENST00000578179 125 ntBASIC2.32□□□□□ -2.04
CCDC144BQ3MJ40 AL021707.8-201ENST00000609428 183 ntBASIC2.32□□□□□ -2.04
CCDC144BQ3MJ40 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CCDC144BQ3MJ40 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CCDC144BQ3MJ40 RNU6-103P-201ENST00000363686 107 ntBASIC2.31□□□□□ -2.04
CCDC144BQ3MJ40 RNU4-10P-201ENST00000364383 140 ntBASIC2.31□□□□□ -2.04
CCDC144BQ3MJ40 Y_RNA.336-201ENST00000365307 109 ntBASIC2.31□□□□□ -2.04
CCDC144BQ3MJ40 MIR616-201ENST00000385293 97 ntBASIC2.31□□□□□ -2.04
CCDC144BQ3MJ40 MIR1278-201ENST00000408753 81 ntBASIC2.31□□□□□ -2.04
CCDC144BQ3MJ40 AC008834.1-201ENST00000511612 175 ntBASIC2.31□□□□□ -2.04
CCDC144BQ3MJ40 RNU1-40P-201ENST00000516816 164 ntBASIC2.31□□□□□ -2.04
CCDC144BQ3MJ40 RNU1-97P-201ENST00000516872 164 ntBASIC2.31□□□□□ -2.04
CCDC144BQ3MJ40 AL391903.3-201ENST00000612158 163 ntBASIC2.31□□□□□ -2.04
CCDC144BQ3MJ40 uc_338.4-201ENST00000616635 176 ntBASIC2.31□□□□□ -2.04
CCDC144BQ3MJ40 ZNF355P-201ENST00000427301 3216 ntBASIC2.31□□□□□ -2.04
CCDC144BQ3MJ40 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CCDC144BQ3MJ40 AC068700.1-201ENST00000565862 3754 ntBASIC2.3□□□□□ -2.04
CCDC144BQ3MJ40 SNORD33-201ENST00000362761 85 ntBASIC2.3□□□□□ -2.04
CCDC144BQ3MJ40 SNORD14E-201ENST00000364009 85 ntBASIC2.3□□□□□ -2.04
CCDC144BQ3MJ40 Y_RNA.229-201ENST00000364347 113 ntBASIC2.3□□□□□ -2.04
CCDC144BQ3MJ40 Y_RNA.257-201ENST00000364596 102 ntBASIC2.3□□□□□ -2.04
CCDC144BQ3MJ40 AC019129.1-201ENST00000403786 261 ntBASIC2.3□□□□□ -2.04
CCDC144BQ3MJ40 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC144BQ3MJ40 SNORD45.4-201ENST00000516629 73 ntBASIC2.3□□□□□ -2.04
CCDC144BQ3MJ40 MIR4662B-201ENST00000579498 81 ntBASIC2.3□□□□□ -2.04
CCDC144BQ3MJ40 AC002984.1-201ENST00000591692 448 ntBASIC2.3□□□□□ -2.04
CCDC144BQ3MJ40 Z83818.1-201ENST00000603584 150 ntBASIC2.3□□□□□ -2.04
CCDC144BQ3MJ40 AC078938.1-201ENST00000620993 318 ntBASIC2.3□□□□□ -2.04
CCDC144BQ3MJ40 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.3□□□□□ -2.04
CCDC144BQ3MJ40 ICE2P2-201ENST00000483823 2787 ntBASIC2.3□□□□□ -2.04
CCDC144BQ3MJ40 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC144BQ3MJ40 MIR583-201ENST00000384846 75 ntBASIC2.29□□□□□ -2.04
CCDC144BQ3MJ40 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC144BQ3MJ40 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC144BQ3MJ40 MIR3671-201ENST00000580455 88 ntBASIC2.29□□□□□ -2.04
CCDC144BQ3MJ40 MIR3935-201ENST00000583472 104 ntBASIC2.29□□□□□ -2.04
CCDC144BQ3MJ40 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.29□□□□□ -2.04
CCDC144BQ3MJ40 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CCDC144BQ3MJ40 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
CCDC144BQ3MJ40 RNU1-17P-201ENST00000363022 152 ntBASIC2.28□□□□□ -2.04
CCDC144BQ3MJ40 Y_RNA.140-201ENST00000363474 103 ntBASIC2.28□□□□□ -2.04
CCDC144BQ3MJ40 Y_RNA.308-201ENST00000365043 101 ntBASIC2.28□□□□□ -2.04
CCDC144BQ3MJ40 RNU6-442P-201ENST00000383968 104 ntBASIC2.28□□□□□ -2.04
CCDC144BQ3MJ40 MIR513A1-201ENST00000385138 129 ntBASIC2.28□□□□□ -2.04
CCDC144BQ3MJ40 RNU6-1228P-201ENST00000391014 107 ntBASIC2.28□□□□□ -2.04
CCDC144BQ3MJ40 SNORA40.18-201ENST00000391200 128 ntBASIC2.28□□□□□ -2.04
CCDC144BQ3MJ40 RNU6-381P-201ENST00000391259 108 ntBASIC2.28□□□□□ -2.04
CCDC144BQ3MJ40 AC114811.1-201ENST00000507207 168 ntBASIC2.28□□□□□ -2.04
CCDC144BQ3MJ40 AC008507.4-201ENST00000585464 127 ntBASIC2.28□□□□□ -2.04
CCDC144BQ3MJ40 AC095038.3-201ENST00000634439 195 ntBASIC2.28□□□□□ -2.04
CCDC144BQ3MJ40 SNORD50B-201ENST00000364995 70 ntBASIC2.27□□□□□ -2.05
CCDC144BQ3MJ40 RNU2-55P-201ENST00000411146 174 ntBASIC2.27□□□□□ -2.05
CCDC144BQ3MJ40 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.27□□□□□ -2.05
CCDC144BQ3MJ40 NDUFA4P2-201ENST00000489989 244 ntBASIC2.27□□□□□ -2.05
CCDC144BQ3MJ40 Y_RNA.700-201ENST00000516806 100 ntBASIC2.27□□□□□ -2.05
CCDC144BQ3MJ40 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.27□□□□□ -2.05
CCDC144BQ3MJ40 AL049861.1-201ENST00000603130 150 ntBASIC2.27□□□□□ -2.05
CCDC144BQ3MJ40 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.27□□□□□ -2.05
CCDC144BQ3MJ40 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.27□□□□□ -2.05
CCDC144BQ3MJ40 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.27□□□□□ -2.05
CCDC144BQ3MJ40 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CCDC144BQ3MJ40 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CCDC144BQ3MJ40 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CCDC144BQ3MJ40 MIR411-201ENST00000362239 96 ntBASIC2.26□□□□□ -2.05
CCDC144BQ3MJ40 Y_RNA.7-201ENST00000362352 102 ntBASIC2.26□□□□□ -2.05
CCDC144BQ3MJ40 RNU6-199P-201ENST00000362954 107 ntBASIC2.26□□□□□ -2.05
CCDC144BQ3MJ40 Y_RNA.121-201ENST00000363309 113 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms