Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 Y_RNA.270-201ENST00000364693 104 ntBASIC1.97□□□□□ -2.09
PTCHD3Q3KNS1 RNU6-886P-201ENST00000384319 105 ntBASIC1.97□□□□□ -2.09
PTCHD3Q3KNS1 MIR522-201ENST00000385071 87 ntBASIC1.97□□□□□ -2.09
PTCHD3Q3KNS1 MT-TR-201ENST00000387439 65 ntBASIC1.97□□□□□ -2.09
PTCHD3Q3KNS1 AL606845.1-201ENST00000404881 255 ntBASIC1.97□□□□□ -2.09
PTCHD3Q3KNS1 RPL30P13-201ENST00000418873 348 ntBASIC1.97□□□□□ -2.09
PTCHD3Q3KNS1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.97□□□□□ -2.09
PTCHD3Q3KNS1 Y_RNA.797-201ENST00000515977 94 ntBASIC1.97□□□□□ -2.09
PTCHD3Q3KNS1 Y_RNA.662-201ENST00000516028 97 ntBASIC1.97□□□□□ -2.09
PTCHD3Q3KNS1 RNU6-126P-201ENST00000516685 103 ntBASIC1.97□□□□□ -2.09
PTCHD3Q3KNS1 AC022559.1-201ENST00000520905 205 ntBASIC1.97□□□□□ -2.09
PTCHD3Q3KNS1 AL773524.1-201ENST00000614065 229 ntBASIC1.97□□□□□ -2.09
PTCHD3Q3KNS1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.97□□□□□ -2.09
PTCHD3Q3KNS1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
PTCHD3Q3KNS1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PTCHD3Q3KNS1 Y_RNA.23-201ENST00000362496 106 ntBASIC1.96□□□□□ -2.1
PTCHD3Q3KNS1 Y_RNA.182-201ENST00000363880 111 ntBASIC1.96□□□□□ -2.1
PTCHD3Q3KNS1 RNU6-275P-201ENST00000364910 107 ntBASIC1.96□□□□□ -2.1
PTCHD3Q3KNS1 AL591806.2-201ENST00000433122 173 ntBASIC1.96□□□□□ -2.1
PTCHD3Q3KNS1 HSPE1P9-201ENST00000440046 311 ntBASIC1.96□□□□□ -2.1
PTCHD3Q3KNS1 AC245047.8-201ENST00000456455 284 ntBASIC1.96□□□□□ -2.1
PTCHD3Q3KNS1 snoU13.27-201ENST00000459278 104 ntBASIC1.96□□□□□ -2.1
PTCHD3Q3KNS1 OR9P1P-201ENST00000496431 281 ntBASIC1.96□□□□□ -2.1
PTCHD3Q3KNS1 RNU6-861P-201ENST00000516745 106 ntBASIC1.96□□□□□ -2.1
PTCHD3Q3KNS1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.96□□□□□ -2.1
PTCHD3Q3KNS1 AC108706.1-201ENST00000611053 297 ntBASIC1.96□□□□□ -2.1
PTCHD3Q3KNS1 AL359851.1-201ENST00000569460 4997 ntBASIC1.96□□□□□ -2.1
PTCHD3Q3KNS1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
PTCHD3Q3KNS1 RNU6-1138P-201ENST00000365359 106 ntBASIC1.95□□□□□ -2.1
PTCHD3Q3KNS1 RNU6-728P-201ENST00000365375 104 ntBASIC1.95□□□□□ -2.1
PTCHD3Q3KNS1 RNU6-1031P-201ENST00000384773 107 ntBASIC1.95□□□□□ -2.1
PTCHD3Q3KNS1 MT-TT-201ENST00000387460 66 ntBASIC1.95□□□□□ -2.1
PTCHD3Q3KNS1 RNU6-131P-201ENST00000391144 107 ntBASIC1.95□□□□□ -2.1
PTCHD3Q3KNS1 Y_RNA.587-201ENST00000391210 103 ntBASIC1.95□□□□□ -2.1
PTCHD3Q3KNS1 RNU4-43P-201ENST00000410628 137 ntBASIC1.95□□□□□ -2.1
PTCHD3Q3KNS1 AL356379.1-201ENST00000414105 126 ntBASIC1.95□□□□□ -2.1
PTCHD3Q3KNS1 AL445646.1-201ENST00000431784 216 ntBASIC1.95□□□□□ -2.1
PTCHD3Q3KNS1 AC005840.1-201ENST00000498412 377 ntBASIC1.95□□□□□ -2.1
PTCHD3Q3KNS1 RNU6-1219P-201ENST00000516143 112 ntBASIC1.95□□□□□ -2.1
PTCHD3Q3KNS1 SNORD77.4-201ENST00000516158 81 ntBASIC1.95□□□□□ -2.1
PTCHD3Q3KNS1 AC109810.1-201ENST00000534066 224 ntBASIC1.95□□□□□ -2.1
PTCHD3Q3KNS1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.95□□□□□ -2.1
PTCHD3Q3KNS1 MIR4662B-201ENST00000579498 81 ntBASIC1.95□□□□□ -2.1
PTCHD3Q3KNS1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.94□□□□□ -2.1
PTCHD3Q3KNS1 SNORA4.2-201ENST00000365313 147 ntBASIC1.94□□□□□ -2.1
PTCHD3Q3KNS1 Y_RNA.412-201ENST00000384001 104 ntBASIC1.94□□□□□ -2.1
PTCHD3Q3KNS1 AC244636.1-201ENST00000421152 228 ntBASIC1.94□□□□□ -2.1
PTCHD3Q3KNS1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.94□□□□□ -2.1
PTCHD3Q3KNS1 STAG3L5P-204ENST00000443759 179 ntBASIC1.94□□□□□ -2.1
PTCHD3Q3KNS1 NDUFA4P2-201ENST00000489989 244 ntBASIC1.94□□□□□ -2.1
PTCHD3Q3KNS1 SNORA31.17-201ENST00000516953 127 ntBASIC1.94□□□□□ -2.1
PTCHD3Q3KNS1 AL160236.1-201ENST00000556317 195 ntBASIC1.94□□□□□ -2.1
PTCHD3Q3KNS1 MIR4709-201ENST00000577272 72 ntBASIC1.94□□□□□ -2.1
PTCHD3Q3KNS1 MIR5089-201ENST00000580047 84 ntBASIC1.94□□□□□ -2.1
PTCHD3Q3KNS1 AL049861.1-201ENST00000603130 150 ntBASIC1.94□□□□□ -2.1
PTCHD3Q3KNS1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
PTCHD3Q3KNS1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
PTCHD3Q3KNS1 RNA5SP276-201ENST00000362580 94 ntBASIC1.93□□□□□ -2.1
PTCHD3Q3KNS1 Y_RNA.441-201ENST00000384123 112 ntBASIC1.93□□□□□ -2.1
PTCHD3Q3KNS1 PCNPP3-201ENST00000393579 471 ntBASIC1.93□□□□□ -2.1
PTCHD3Q3KNS1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.93□□□□□ -2.1
PTCHD3Q3KNS1 SNRPGP8-201ENST00000454064 226 ntBASIC1.93□□□□□ -2.1
PTCHD3Q3KNS1 AC022254.1-201ENST00000567857 235 ntBASIC1.93□□□□□ -2.1
PTCHD3Q3KNS1 MIR4769-201ENST00000584126 77 ntBASIC1.93□□□□□ -2.1
PTCHD3Q3KNS1 AC008507.4-201ENST00000585464 127 ntBASIC1.93□□□□□ -2.1
PTCHD3Q3KNS1 AC027279.3-201ENST00000625055 122 ntBASIC1.93□□□□□ -2.1
PTCHD3Q3KNS1 SNORD68-201ENST00000363214 84 ntBASIC1.92□□□□□ -2.1
PTCHD3Q3KNS1 Y_RNA.464-201ENST00000384282 110 ntBASIC1.92□□□□□ -2.1
PTCHD3Q3KNS1 SNORA12.1-201ENST00000390873 148 ntBASIC1.92□□□□□ -2.1
PTCHD3Q3KNS1 snoU13.23-201ENST00000458863 104 ntBASIC1.92□□□□□ -2.1
PTCHD3Q3KNS1 RNA5SP233-201ENST00000459153 113 ntBASIC1.92□□□□□ -2.1
PTCHD3Q3KNS1 RNA5SP57-201ENST00000459463 123 ntBASIC1.92□□□□□ -2.1
PTCHD3Q3KNS1 RNA5SP153-201ENST00000516498 76 ntBASIC1.92□□□□□ -2.1
PTCHD3Q3KNS1 RNU7-149P-201ENST00000516739 59 ntBASIC1.92□□□□□ -2.1
PTCHD3Q3KNS1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.92□□□□□ -2.1
PTCHD3Q3KNS1 MIR4431-201ENST00000579990 94 ntBASIC1.92□□□□□ -2.1
PTCHD3Q3KNS1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.92□□□□□ -2.1
PTCHD3Q3KNS1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
PTCHD3Q3KNS1 MIRLET7C-201ENST00000362160 84 ntBASIC1.91□□□□□ -2.1
PTCHD3Q3KNS1 Y_RNA.150-201ENST00000363562 102 ntBASIC1.91□□□□□ -2.1
PTCHD3Q3KNS1 RNU6-209P-201ENST00000384118 107 ntBASIC1.91□□□□□ -2.1
PTCHD3Q3KNS1 SNORA26-201ENST00000391286 122 ntBASIC1.91□□□□□ -2.1
PTCHD3Q3KNS1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.91□□□□□ -2.1
PTCHD3Q3KNS1 MLLT10P1-201ENST00000418346 262 ntBASIC1.91□□□□□ -2.1
PTCHD3Q3KNS1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.91□□□□□ -2.1
PTCHD3Q3KNS1 AL121914.1-201ENST00000450188 156 ntBASIC1.91□□□□□ -2.1
PTCHD3Q3KNS1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.91□□□□□ -2.1
PTCHD3Q3KNS1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.91□□□□□ -2.1
PTCHD3Q3KNS1 AC108210.2-201ENST00000503681 201 ntBASIC1.91□□□□□ -2.1
PTCHD3Q3KNS1 RNU6-1299P-201ENST00000516316 100 ntBASIC1.91□□□□□ -2.1
PTCHD3Q3KNS1 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.91□□□□□ -2.1
PTCHD3Q3KNS1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.91□□□□□ -2.1
PTCHD3Q3KNS1 AC015712.3-201ENST00000559380 164 ntBASIC1.91□□□□□ -2.1
PTCHD3Q3KNS1 DEFB122-202ENST00000569013 197 ntBASIC1.91□□□□□ -2.1
PTCHD3Q3KNS1 MIR4287-201ENST00000579398 78 ntBASIC1.91□□□□□ -2.1
PTCHD3Q3KNS1 SNRPGP19-201ENST00000603826 189 ntBASIC1.91□□□□□ -2.1
PTCHD3Q3KNS1 AL513423.1-201ENST00000621695 132 ntBASIC1.91□□□□□ -2.1
PTCHD3Q3KNS1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.91□□□□□ -2.1
PTCHD3Q3KNS1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
PTCHD3Q3KNS1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 194.4 ms