Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 RNU7-35P-201ENST00000517174 62 ntBASIC3.39□□□□□ -1.87
FOXC1Q12948 MIR3945-201ENST00000581853 98 ntBASIC3.39□□□□□ -1.87
FOXC1Q12948 FAM106DP-201ENST00000586416 501 ntBASIC3.39□□□□□ -1.87
FOXC1Q12948 SNORD3E-202ENST00000627253 216 ntBASIC3.39□□□□□ -1.87
FOXC1Q12948 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.39□□□□□ -1.87
FOXC1Q12948 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
FOXC1Q12948 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
FOXC1Q12948 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.39□□□□□ -1.87
FOXC1Q12948 LINC02471-203ENST00000641941 4752 ntBASIC3.39□□□□□ -1.87
FOXC1Q12948 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
FOXC1Q12948 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
FOXC1Q12948 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
FOXC1Q12948 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
FOXC1Q12948 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.38□□□□□ -1.87
FOXC1Q12948 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
FOXC1Q12948 RNA5SP133-201ENST00000363368 119 ntBASIC3.38□□□□□ -1.87
FOXC1Q12948 RNU2-37P-201ENST00000410695 177 ntBASIC3.38□□□□□ -1.87
FOXC1Q12948 AC004552.1-201ENST00000419089 348 ntBASIC3.38□□□□□ -1.87
FOXC1Q12948 RPS26P3-201ENST00000470205 348 ntBASIC3.38□□□□□ -1.87
FOXC1Q12948 AC090543.2-201ENST00000483963 348 ntBASIC3.38□□□□□ -1.87
FOXC1Q12948 AC004057.1-201ENST00000485827 348 ntBASIC3.38□□□□□ -1.87
FOXC1Q12948 SNORA48.11-201ENST00000517015 89 ntBASIC3.38□□□□□ -1.87
FOXC1Q12948 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.38□□□□□ -1.87
FOXC1Q12948 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.38□□□□□ -1.87
FOXC1Q12948 AL033523.1-201ENST00000605153 153 ntBASIC3.38□□□□□ -1.87
FOXC1Q12948 AL020996.3-201ENST00000606617 222 ntBASIC3.38□□□□□ -1.87
FOXC1Q12948 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
FOXC1Q12948 AC096644.4-201ENST00000563417 2912 ntBASIC3.38□□□□□ -1.87
FOXC1Q12948 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
FOXC1Q12948 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
FOXC1Q12948 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
FOXC1Q12948 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.37□□□□□ -1.87
FOXC1Q12948 Y_RNA.205-201ENST00000364128 113 ntBASIC3.37□□□□□ -1.87
FOXC1Q12948 RNU6-686P-201ENST00000364839 107 ntBASIC3.37□□□□□ -1.87
FOXC1Q12948 SNORA70.7-201ENST00000384159 133 ntBASIC3.37□□□□□ -1.87
FOXC1Q12948 RNU6-163P-201ENST00000384396 106 ntBASIC3.37□□□□□ -1.87
FOXC1Q12948 SNORA48.8-201ENST00000391324 134 ntBASIC3.37□□□□□ -1.87
FOXC1Q12948 RNU6-519P-201ENST00000410590 108 ntBASIC3.37□□□□□ -1.87
FOXC1Q12948 AC245047.3-201ENST00000429428 127 ntBASIC3.37□□□□□ -1.87
FOXC1Q12948 AL031183.1-201ENST00000457667 207 ntBASIC3.37□□□□□ -1.87
FOXC1Q12948 RNU7-73P-201ENST00000458743 63 ntBASIC3.37□□□□□ -1.87
FOXC1Q12948 U3.44-201ENST00000458938 192 ntBASIC3.37□□□□□ -1.87
FOXC1Q12948 S100A11P1-201ENST00000477525 312 ntBASIC3.37□□□□□ -1.87
FOXC1Q12948 RNU6-958P-201ENST00000516995 106 ntBASIC3.37□□□□□ -1.87
FOXC1Q12948 IGKV2-26-201ENST00000518305 343 ntBASIC3.37□□□□□ -1.87
FOXC1Q12948 MIR4276-201ENST00000584832 70 ntBASIC3.37□□□□□ -1.87
FOXC1Q12948 MIR5739-201ENST00000619803 80 ntBASIC3.37□□□□□ -1.87
FOXC1Q12948 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.37□□□□□ -1.87
FOXC1Q12948 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
FOXC1Q12948 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
FOXC1Q12948 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.37□□□□□ -1.87
FOXC1Q12948 SNORA63.2-201ENST00000362603 126 ntBASIC3.36□□□□□ -1.87
FOXC1Q12948 RNU6-342P-201ENST00000384521 104 ntBASIC3.36□□□□□ -1.87
FOXC1Q12948 SNORA2B-201ENST00000384583 137 ntBASIC3.36□□□□□ -1.87
FOXC1Q12948 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.36□□□□□ -1.87
FOXC1Q12948 SPINT5P-201ENST00000448174 155 ntBASIC3.36□□□□□ -1.87
FOXC1Q12948 RPS29P29-201ENST00000456396 171 ntBASIC3.36□□□□□ -1.87
FOXC1Q12948 AC100770.1-201ENST00000532310 322 ntBASIC3.36□□□□□ -1.87
FOXC1Q12948 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.36□□□□□ -1.87
FOXC1Q12948 MIR4791-201ENST00000607666 84 ntBASIC3.36□□□□□ -1.87
FOXC1Q12948 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.36□□□□□ -1.87
FOXC1Q12948 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
FOXC1Q12948 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
FOXC1Q12948 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.36□□□□□ -1.87
FOXC1Q12948 Z83843.1-201ENST00000604070 3685 ntBASIC3.35□□□□□ -1.87
FOXC1Q12948 AC091152.2-201ENST00000591628 2569 ntBASIC3.35□□□□□ -1.87
FOXC1Q12948 SNORA1.2-201ENST00000365189 134 ntBASIC3.35□□□□□ -1.87
FOXC1Q12948 Y_RNA.448-201ENST00000384185 108 ntBASIC3.35□□□□□ -1.87
FOXC1Q12948 RNU6-480P-201ENST00000384332 107 ntBASIC3.35□□□□□ -1.87
FOXC1Q12948 RNU6-913P-201ENST00000390913 95 ntBASIC3.35□□□□□ -1.87
FOXC1Q12948 SNORD4B-201ENST00000459083 72 ntBASIC3.35□□□□□ -1.87
FOXC1Q12948 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.35□□□□□ -1.87
FOXC1Q12948 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.35□□□□□ -1.87
FOXC1Q12948 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.35□□□□□ -1.87
FOXC1Q12948 AL356280.1-201ENST00000603614 379 ntBASIC3.35□□□□□ -1.87
FOXC1Q12948 AC012676.2-201ENST00000619258 186 ntBASIC3.35□□□□□ -1.87
FOXC1Q12948 AC006111.3-201ENST00000622137 383 ntBASIC3.35□□□□□ -1.87
FOXC1Q12948 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.35□□□□□ -1.87
FOXC1Q12948 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
FOXC1Q12948 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
FOXC1Q12948 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
FOXC1Q12948 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
FOXC1Q12948 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
FOXC1Q12948 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.34□□□□□ -1.87
FOXC1Q12948 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
FOXC1Q12948 Y_RNA.370-201ENST00000365589 108 ntBASIC3.34□□□□□ -1.87
FOXC1Q12948 SNORA44-201ENST00000384584 132 ntBASIC3.34□□□□□ -1.87
FOXC1Q12948 Y_RNA.532-201ENST00000384590 113 ntBASIC3.34□□□□□ -1.87
FOXC1Q12948 MIR592-201ENST00000384959 97 ntBASIC3.34□□□□□ -1.87
FOXC1Q12948 RNU6-634P-201ENST00000459134 106 ntBASIC3.34□□□□□ -1.87
FOXC1Q12948 RNU6-687P-201ENST00000516443 89 ntBASIC3.34□□□□□ -1.87
FOXC1Q12948 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.34□□□□□ -1.87
FOXC1Q12948 AP003355.3-201ENST00000623465 114 ntBASIC3.34□□□□□ -1.87
FOXC1Q12948 MIR7157-201ENST00000635801 60 ntBASIC3.34□□□□□ -1.87
FOXC1Q12948 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
FOXC1Q12948 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.34□□□□□ -1.88
FOXC1Q12948 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
FOXC1Q12948 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
FOXC1Q12948 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
FOXC1Q12948 AL133412.1-201ENST00000380194 2992 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms