Protein–RNA interactions for Protein: Q01954

BNC1, Zinc finger protein basonuclin-1, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BNC1Q01954 MTND2P29-201ENST00000438595 412 ntBASIC1.8□□□□□ -2.12
BNC1Q01954 AC069257.2-201ENST00000441819 155 ntBASIC1.8□□□□□ -2.12
BNC1Q01954 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.8□□□□□ -2.12
BNC1Q01954 AC091021.1-201ENST00000468051 388 ntBASIC1.8□□□□□ -2.12
BNC1Q01954 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.8□□□□□ -2.12
BNC1Q01954 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.8□□□□□ -2.12
BNC1Q01954 AL163195.1-201ENST00000496941 348 ntBASIC1.8□□□□□ -2.12
BNC1Q01954 AC011604.1-201ENST00000545978 196 ntBASIC1.8□□□□□ -2.12
BNC1Q01954 MIR4303-201ENST00000581299 66 ntBASIC1.8□□□□□ -2.12
BNC1Q01954 MIR2681-201ENST00000581814 105 ntBASIC1.8□□□□□ -2.12
BNC1Q01954 AC069114.2-201ENST00000604699 304 ntBASIC1.8□□□□□ -2.12
BNC1Q01954 Y_RNA.24-201ENST00000362508 103 ntBASIC1.79□□□□□ -2.12
BNC1Q01954 RNU4-10P-201ENST00000364383 140 ntBASIC1.79□□□□□ -2.12
BNC1Q01954 RNU6-969P-201ENST00000383900 105 ntBASIC1.79□□□□□ -2.12
BNC1Q01954 RNU6-209P-201ENST00000384118 107 ntBASIC1.79□□□□□ -2.12
BNC1Q01954 RNU4-70P-201ENST00000384579 139 ntBASIC1.79□□□□□ -2.12
BNC1Q01954 MIR597-201ENST00000384968 97 ntBASIC1.79□□□□□ -2.12
BNC1Q01954 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
BNC1Q01954 RNA5SP496-201ENST00000391240 109 ntBASIC1.79□□□□□ -2.12
BNC1Q01954 AP1B1P2-201ENST00000416196 106 ntBASIC1.79□□□□□ -2.12
BNC1Q01954 AL391903.3-201ENST00000612158 163 ntBASIC1.79□□□□□ -2.12
BNC1Q01954 U6.106-201ENST00000636360 105 ntBASIC1.79□□□□□ -2.12
BNC1Q01954 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
BNC1Q01954 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
BNC1Q01954 RNU6-682P-201ENST00000363843 106 ntBASIC1.78□□□□□ -2.12
BNC1Q01954 Y_RNA.180-201ENST00000363867 113 ntBASIC1.78□□□□□ -2.12
BNC1Q01954 Y_RNA.203-201ENST00000364106 102 ntBASIC1.78□□□□□ -2.12
BNC1Q01954 RNU6-886P-201ENST00000384319 105 ntBASIC1.78□□□□□ -2.12
BNC1Q01954 MIR616-201ENST00000385293 97 ntBASIC1.78□□□□□ -2.12
BNC1Q01954 SNORA48.1-201ENST00000390879 135 ntBASIC1.78□□□□□ -2.12
BNC1Q01954 RNA5SP212-201ENST00000391223 107 ntBASIC1.78□□□□□ -2.12
BNC1Q01954 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.78□□□□□ -2.12
BNC1Q01954 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
BNC1Q01954 Y_RNA.240-201ENST00000364469 95 ntBASIC1.77□□□□□ -2.13
BNC1Q01954 MIR1287-201ENST00000408492 90 ntBASIC1.77□□□□□ -2.13
BNC1Q01954 RPL31P63-201ENST00000422565 375 ntBASIC1.77□□□□□ -2.13
BNC1Q01954 Y_RNA.662-201ENST00000516028 97 ntBASIC1.77□□□□□ -2.13
BNC1Q01954 RNU6-861P-201ENST00000516745 106 ntBASIC1.77□□□□□ -2.13
BNC1Q01954 AC022559.1-201ENST00000520905 205 ntBASIC1.77□□□□□ -2.13
BNC1Q01954 AP002004.2-201ENST00000531656 154 ntBASIC1.77□□□□□ -2.13
BNC1Q01954 AC024614.2-201ENST00000577584 372 ntBASIC1.77□□□□□ -2.13
BNC1Q01954 MIR4255-201ENST00000579351 72 ntBASIC1.77□□□□□ -2.13
BNC1Q01954 AL929325.1-201ENST00000603096 117 ntBASIC1.77□□□□□ -2.13
BNC1Q01954 RNU2-4P-201ENST00000606190 192 ntBASIC1.77□□□□□ -2.13
BNC1Q01954 U1.36-201ENST00000620684 176 ntBASIC1.77□□□□□ -2.13
BNC1Q01954 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.76□□□□□ -2.13
BNC1Q01954 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
BNC1Q01954 Y_RNA.75-201ENST00000362927 97 ntBASIC1.76□□□□□ -2.13
BNC1Q01954 Y_RNA.150-201ENST00000363562 102 ntBASIC1.76□□□□□ -2.13
BNC1Q01954 snoU2_19.4-201ENST00000364329 80 ntBASIC1.76□□□□□ -2.13
BNC1Q01954 Y_RNA.229-201ENST00000364347 113 ntBASIC1.76□□□□□ -2.13
BNC1Q01954 RNU4-41P-201ENST00000364426 143 ntBASIC1.76□□□□□ -2.13
BNC1Q01954 RNY3P5-201ENST00000384127 102 ntBASIC1.76□□□□□ -2.13
BNC1Q01954 RNU6-383P-201ENST00000410864 94 ntBASIC1.76□□□□□ -2.13
BNC1Q01954 RN7SKP101-201ENST00000411376 320 ntBASIC1.76□□□□□ -2.13
BNC1Q01954 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
BNC1Q01954 AC233266.1-201ENST00000454518 96 ntBASIC1.76□□□□□ -2.13
BNC1Q01954 AC005840.1-201ENST00000498412 377 ntBASIC1.76□□□□□ -2.13
BNC1Q01954 RNU6-1291P-201ENST00000516591 104 ntBASIC1.76□□□□□ -2.13
BNC1Q01954 AC084364.2-201ENST00000546924 395 ntBASIC1.76□□□□□ -2.13
BNC1Q01954 MIR5094-201ENST00000578766 85 ntBASIC1.76□□□□□ -2.13
BNC1Q01954 MIR4744-201ENST00000581563 82 ntBASIC1.76□□□□□ -2.13
BNC1Q01954 AC242852.1-201ENST00000612151 96 ntBASIC1.76□□□□□ -2.13
BNC1Q01954 MIR7111-201ENST00000619751 72 ntBASIC1.76□□□□□ -2.13
BNC1Q01954 AC244015.1-201ENST00000622301 99 ntBASIC1.76□□□□□ -2.13
BNC1Q01954 RNU6-312P-201ENST00000364629 107 ntBASIC1.75□□□□□ -2.13
BNC1Q01954 Y_RNA.267-201ENST00000364679 109 ntBASIC1.75□□□□□ -2.13
BNC1Q01954 Y_RNA.572-201ENST00000384757 98 ntBASIC1.75□□□□□ -2.13
BNC1Q01954 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
BNC1Q01954 RNU6-1228P-201ENST00000391014 107 ntBASIC1.75□□□□□ -2.13
BNC1Q01954 PCNPP3-201ENST00000393579 471 ntBASIC1.75□□□□□ -2.13
BNC1Q01954 Y_RNA.621-201ENST00000411065 96 ntBASIC1.75□□□□□ -2.13
BNC1Q01954 AC245047.4-201ENST00000433189 144 ntBASIC1.75□□□□□ -2.13
BNC1Q01954 Y_RNA.797-201ENST00000515977 94 ntBASIC1.75□□□□□ -2.13
BNC1Q01954 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.75□□□□□ -2.13
BNC1Q01954 MRPS18CP4-201ENST00000535821 231 ntBASIC1.75□□□□□ -2.13
BNC1Q01954 AC022217.4-201ENST00000604389 163 ntBASIC1.75□□□□□ -2.13
BNC1Q01954 AL359821.1-201ENST00000605519 182 ntBASIC1.75□□□□□ -2.13
BNC1Q01954 AL021707.8-201ENST00000609428 183 ntBASIC1.75□□□□□ -2.13
BNC1Q01954 Y_RNA.23-201ENST00000362496 106 ntBASIC1.74□□□□□ -2.13
BNC1Q01954 Y_RNA.182-201ENST00000363880 111 ntBASIC1.74□□□□□ -2.13
BNC1Q01954 RNU6-275P-201ENST00000364910 107 ntBASIC1.74□□□□□ -2.13
BNC1Q01954 RNU6-578P-201ENST00000390980 103 ntBASIC1.74□□□□□ -2.13
BNC1Q01954 MIR1278-201ENST00000408753 81 ntBASIC1.74□□□□□ -2.13
BNC1Q01954 RNA5SP501-201ENST00000410990 112 ntBASIC1.74□□□□□ -2.13
BNC1Q01954 AC245047.3-201ENST00000429428 127 ntBASIC1.74□□□□□ -2.13
BNC1Q01954 RPS27P1-201ENST00000450552 247 ntBASIC1.74□□□□□ -2.13
BNC1Q01954 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.74□□□□□ -2.13
BNC1Q01954 AC023449.1-201ENST00000454464 154 ntBASIC1.74□□□□□ -2.13
BNC1Q01954 SCARNA8-201ENST00000515924 131 ntBASIC1.74□□□□□ -2.13
BNC1Q01954 RNU6-1219P-201ENST00000516143 112 ntBASIC1.74□□□□□ -2.13
BNC1Q01954 RNVU1-2-201ENST00000516326 135 ntBASIC1.74□□□□□ -2.13
BNC1Q01954 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.74□□□□□ -2.13
BNC1Q01954 SUB1P4-201ENST00000566062 339 ntBASIC1.74□□□□□ -2.13
BNC1Q01954 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.74□□□□□ -2.13
BNC1Q01954 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.74□□□□□ -2.13
BNC1Q01954 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.74□□□□□ -2.13
BNC1Q01954 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
BNC1Q01954 SNORA1B-201ENST00000362535 133 ntBASIC1.73□□□□□ -2.13
BNC1Q01954 Y_RNA.796-201ENST00000364268 102 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 1067.6 ms