Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 Y_RNA.662-201ENST00000516028 97 ntBASIC1.85□□□□□ -2.11
RAE1P78406 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.85□□□□□ -2.11
RAE1P78406 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.85□□□□□ -2.11
RAE1P78406 MIR3935-201ENST00000583472 104 ntBASIC1.85□□□□□ -2.11
RAE1P78406 AL773524.1-201ENST00000614065 229 ntBASIC1.85□□□□□ -2.11
RAE1P78406 Y_RNA.150-201ENST00000363562 102 ntBASIC1.84□□□□□ -2.11
RAE1P78406 RNU6-312P-201ENST00000364629 107 ntBASIC1.84□□□□□ -2.11
RAE1P78406 RNU6-1138P-201ENST00000365359 106 ntBASIC1.84□□□□□ -2.11
RAE1P78406 Y_RNA.587-201ENST00000391210 103 ntBASIC1.84□□□□□ -2.11
RAE1P78406 RNU2-55P-201ENST00000411146 174 ntBASIC1.84□□□□□ -2.11
RAE1P78406 RNA5SP508-201ENST00000411327 119 ntBASIC1.84□□□□□ -2.11
RAE1P78406 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.84□□□□□ -2.11
RAE1P78406 RPL23AP94-201ENST00000512518 302 ntBASIC1.84□□□□□ -2.11
RAE1P78406 AC008507.4-201ENST00000585464 127 ntBASIC1.84□□□□□ -2.11
RAE1P78406 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.84□□□□□ -2.12
RAE1P78406 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
RAE1P78406 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
RAE1P78406 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
RAE1P78406 ZNF355P-201ENST00000427301 3216 ntBASIC1.83□□□□□ -2.12
RAE1P78406 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.83□□□□□ -2.12
RAE1P78406 Y_RNA.180-201ENST00000363867 113 ntBASIC1.83□□□□□ -2.12
RAE1P78406 Y_RNA.242-201ENST00000364473 110 ntBASIC1.83□□□□□ -2.12
RAE1P78406 RNU6-728P-201ENST00000365375 104 ntBASIC1.83□□□□□ -2.12
RAE1P78406 RNU6-360P-201ENST00000390944 104 ntBASIC1.83□□□□□ -2.12
RAE1P78406 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.83□□□□□ -2.12
RAE1P78406 RNU4-43P-201ENST00000410628 137 ntBASIC1.83□□□□□ -2.12
RAE1P78406 RPL30P13-201ENST00000418873 348 ntBASIC1.83□□□□□ -2.12
RAE1P78406 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.83□□□□□ -2.12
RAE1P78406 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.83□□□□□ -2.12
RAE1P78406 RNU6-126P-201ENST00000516685 103 ntBASIC1.83□□□□□ -2.12
RAE1P78406 MIR4662B-201ENST00000579498 81 ntBASIC1.83□□□□□ -2.12
RAE1P78406 AC021506.2-201ENST00000612354 169 ntBASIC1.83□□□□□ -2.12
RAE1P78406 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RAE1P78406 AC092881.1-201ENST00000638218 2733 ntBASIC1.82□□□□□ -2.12
RAE1P78406 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
RAE1P78406 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.82□□□□□ -2.12
RAE1P78406 MIRLET7C-201ENST00000362160 84 ntBASIC1.82□□□□□ -2.12
RAE1P78406 SNORD45.3-201ENST00000363836 72 ntBASIC1.82□□□□□ -2.12
RAE1P78406 RNU6-484P-201ENST00000384016 107 ntBASIC1.82□□□□□ -2.12
RAE1P78406 RNU6-424P-201ENST00000384367 105 ntBASIC1.82□□□□□ -2.12
RAE1P78406 MIR15B-201ENST00000385045 98 ntBASIC1.82□□□□□ -2.12
RAE1P78406 SUMO2P12-201ENST00000405924 140 ntBASIC1.82□□□□□ -2.12
RAE1P78406 RN7SKP51-201ENST00000410781 304 ntBASIC1.82□□□□□ -2.12
RAE1P78406 MLLT10P1-201ENST00000418346 262 ntBASIC1.82□□□□□ -2.12
RAE1P78406 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RAE1P78406 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.82□□□□□ -2.12
RAE1P78406 AC099513.1-201ENST00000490423 301 ntBASIC1.82□□□□□ -2.12
RAE1P78406 AC005840.1-201ENST00000498412 377 ntBASIC1.82□□□□□ -2.12
RAE1P78406 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.82□□□□□ -2.12
RAE1P78406 CYCTP-201ENST00000504253 315 ntBASIC1.82□□□□□ -2.12
RAE1P78406 RNU7-149P-201ENST00000516739 59 ntBASIC1.82□□□□□ -2.12
RAE1P78406 MIR514B-201ENST00000516774 80 ntBASIC1.82□□□□□ -2.12
RAE1P78406 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.82□□□□□ -2.12
RAE1P78406 MIR4299-201ENST00000577899 72 ntBASIC1.82□□□□□ -2.12
RAE1P78406 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.82□□□□□ -2.12
RAE1P78406 AL513423.1-201ENST00000621695 132 ntBASIC1.82□□□□□ -2.12
RAE1P78406 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.82□□□□□ -2.12
RAE1P78406 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RAE1P78406 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
RAE1P78406 Y_RNA.432-201ENST00000384087 111 ntBASIC1.81□□□□□ -2.12
RAE1P78406 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.81□□□□□ -2.12
RAE1P78406 CALM2P4-201ENST00000430810 426 ntBASIC1.81□□□□□ -2.12
RAE1P78406 AL121914.1-201ENST00000450188 156 ntBASIC1.81□□□□□ -2.12
RAE1P78406 MRPS17P9-201ENST00000511924 393 ntBASIC1.81□□□□□ -2.12
RAE1P78406 RNU6-561P-201ENST00000516222 102 ntBASIC1.81□□□□□ -2.12
RAE1P78406 AL160236.1-201ENST00000556317 195 ntBASIC1.81□□□□□ -2.12
RAE1P78406 MIR4713-201ENST00000582691 75 ntBASIC1.81□□□□□ -2.12
RAE1P78406 AC120024.3-201ENST00000603167 156 ntBASIC1.81□□□□□ -2.12
RAE1P78406 AL627230.6-201ENST00000611129 280 ntBASIC1.81□□□□□ -2.12
RAE1P78406 AC027279.3-201ENST00000625055 122 ntBASIC1.81□□□□□ -2.12
RAE1P78406 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.81□□□□□ -2.12
RAE1P78406 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RAE1P78406 RNU6-661P-201ENST00000362409 107 ntBASIC1.8□□□□□ -2.12
RAE1P78406 snoU2-30.1-201ENST00000365012 70 ntBASIC1.8□□□□□ -2.12
RAE1P78406 Y_RNA.441-201ENST00000384123 112 ntBASIC1.8□□□□□ -2.12
RAE1P78406 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
RAE1P78406 U8.16-201ENST00000391279 133 ntBASIC1.8□□□□□ -2.12
RAE1P78406 RNA5SP489-201ENST00000410986 109 ntBASIC1.8□□□□□ -2.12
RAE1P78406 Y_RNA.622-201ENST00000411091 108 ntBASIC1.8□□□□□ -2.12
RAE1P78406 HMGN2P32-201ENST00000444648 269 ntBASIC1.8□□□□□ -2.12
RAE1P78406 RPL23AP6-201ENST00000446637 472 ntBASIC1.8□□□□□ -2.12
RAE1P78406 AC074198.2-201ENST00000508153 258 ntBASIC1.8□□□□□ -2.12
RAE1P78406 RNU6-1299P-201ENST00000516316 100 ntBASIC1.8□□□□□ -2.12
RAE1P78406 RNA5SP153-201ENST00000516498 76 ntBASIC1.8□□□□□ -2.12
RAE1P78406 RNA5SP168-201ENST00000516642 112 ntBASIC1.8□□□□□ -2.12
RAE1P78406 MIR4431-201ENST00000579990 94 ntBASIC1.8□□□□□ -2.12
RAE1P78406 AC097639.2-201ENST00000603159 172 ntBASIC1.8□□□□□ -2.12
RAE1P78406 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RAE1P78406 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
RAE1P78406 SNORD14E-201ENST00000364009 85 ntBASIC1.79□□□□□ -2.12
RAE1P78406 SNORD50B-201ENST00000364995 70 ntBASIC1.79□□□□□ -2.12
RAE1P78406 RNU6-643P-201ENST00000384018 107 ntBASIC1.79□□□□□ -2.12
RAE1P78406 SNORD72-201ENST00000390994 80 ntBASIC1.79□□□□□ -2.12
RAE1P78406 SNORA79-201ENST00000408376 140 ntBASIC1.79□□□□□ -2.12
RAE1P78406 RNU5E-9P-201ENST00000411164 104 ntBASIC1.79□□□□□ -2.12
RAE1P78406 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.79□□□□□ -2.12
RAE1P78406 SNRPGP8-201ENST00000454064 226 ntBASIC1.79□□□□□ -2.12
RAE1P78406 RNA5SP364-201ENST00000516938 78 ntBASIC1.79□□□□□ -2.12
RAE1P78406 MIR4648-201ENST00000580107 72 ntBASIC1.79□□□□□ -2.12
RAE1P78406 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms