Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 SNORD115-15-201ENST00000364809 81 ntBASIC3.54□□□□□ -1.84
USP46P62068 SNORD115-1-201ENST00000364961 82 ntBASIC3.54□□□□□ -1.84
USP46P62068 SNORD115-26-201ENST00000365067 82 ntBASIC3.54□□□□□ -1.84
USP46P62068 SNORD115-10-201ENST00000365073 81 ntBASIC3.54□□□□□ -1.84
USP46P62068 SNORD115-43-201ENST00000365503 82 ntBASIC3.54□□□□□ -1.84
USP46P62068 SNORD115-36-201ENST00000365629 82 ntBASIC3.54□□□□□ -1.84
USP46P62068 RNU6-1124P-201ENST00000384169 107 ntBASIC3.54□□□□□ -1.84
USP46P62068 MIR1267-201ENST00000408723 78 ntBASIC3.54□□□□□ -1.84
USP46P62068 Z92545.1-201ENST00000411782 234 ntBASIC3.54□□□□□ -1.84
USP46P62068 AC015922.2-201ENST00000435593 184 ntBASIC3.54□□□□□ -1.84
USP46P62068 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.54□□□□□ -1.84
USP46P62068 RNU7-113P-201ENST00000459273 62 ntBASIC3.54□□□□□ -1.84
USP46P62068 MIR548Z-201ENST00000584743 97 ntBASIC3.54□□□□□ -1.84
USP46P62068 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
USP46P62068 AC092881.1-201ENST00000638218 2733 ntBASIC3.54□□□□□ -1.84
USP46P62068 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
USP46P62068 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.54□□□□□ -1.84
USP46P62068 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
USP46P62068 Y_RNA.171-201ENST00000363760 102 ntBASIC3.53□□□□□ -1.84
USP46P62068 SNORA18-201ENST00000384416 132 ntBASIC3.53□□□□□ -1.84
USP46P62068 RNA5SP225-201ENST00000410874 135 ntBASIC3.53□□□□□ -1.84
USP46P62068 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.53□□□□□ -1.84
USP46P62068 POLR2J4-204ENST00000418424 324 ntBASIC3.53□□□□□ -1.84
USP46P62068 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.53□□□□□ -1.84
USP46P62068 AC115115.1-201ENST00000449927 248 ntBASIC3.53□□□□□ -1.84
USP46P62068 IGLV3-17-201ENST00000519099 244 ntBASIC3.53□□□□□ -1.84
USP46P62068 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.53□□□□□ -1.84
USP46P62068 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
USP46P62068 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
USP46P62068 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.52□□□□□ -1.85
USP46P62068 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USP46P62068 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
USP46P62068 Y_RNA.299-201ENST00000364973 94 ntBASIC3.52□□□□□ -1.85
USP46P62068 RNU6-805P-201ENST00000365643 106 ntBASIC3.52□□□□□ -1.85
USP46P62068 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
USP46P62068 RNU4-69P-201ENST00000410677 143 ntBASIC3.52□□□□□ -1.85
USP46P62068 AL135938.1-201ENST00000443141 297 ntBASIC3.52□□□□□ -1.85
USP46P62068 UBL5P3-201ENST00000475112 231 ntBASIC3.52□□□□□ -1.85
USP46P62068 RN7SKP57-201ENST00000517248 293 ntBASIC3.52□□□□□ -1.85
USP46P62068 SNORA50A-202ENST00000629536 136 ntBASIC3.52□□□□□ -1.85
USP46P62068 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USP46P62068 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
USP46P62068 AL021368.2-201ENST00000606125 5352 ntBASIC3.51□□□□□ -1.85
USP46P62068 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
USP46P62068 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
USP46P62068 MIRLET7C-201ENST00000362160 84 ntBASIC3.51□□□□□ -1.85
USP46P62068 RNU6-228P-201ENST00000362700 106 ntBASIC3.51□□□□□ -1.85
USP46P62068 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.51□□□□□ -1.85
USP46P62068 RPL39P39-201ENST00000455840 151 ntBASIC3.51□□□□□ -1.85
USP46P62068 RPL23AP63-201ENST00000498752 471 ntBASIC3.51□□□□□ -1.85
USP46P62068 SNORA74D-201ENST00000516404 141 ntBASIC3.51□□□□□ -1.85
USP46P62068 MIR3616-201ENST00000584070 92 ntBASIC3.51□□□□□ -1.85
USP46P62068 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.51□□□□□ -1.85
USP46P62068 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.51□□□□□ -1.85
USP46P62068 AC027279.3-201ENST00000625055 122 ntBASIC3.51□□□□□ -1.85
USP46P62068 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
USP46P62068 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
USP46P62068 AP000648.3-201ENST00000623539 4507 ntBASIC3.51□□□□□ -1.85
USP46P62068 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
USP46P62068 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
USP46P62068 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.5□□□□□ -1.85
USP46P62068 RNU6-497P-201ENST00000365316 104 ntBASIC3.5□□□□□ -1.85
USP46P62068 RNA5SP380-201ENST00000517190 98 ntBASIC3.5□□□□□ -1.85
USP46P62068 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
USP46P62068 MIR30E-201ENST00000362104 92 ntBASIC3.49□□□□□ -1.85
USP46P62068 RNU1-70P-201ENST00000362618 164 ntBASIC3.49□□□□□ -1.85
USP46P62068 Y_RNA.73-201ENST00000362910 113 ntBASIC3.49□□□□□ -1.85
USP46P62068 RNU6-525P-201ENST00000363685 104 ntBASIC3.49□□□□□ -1.85
USP46P62068 RNU6-242P-201ENST00000384359 107 ntBASIC3.49□□□□□ -1.85
USP46P62068 SNORD77B-201ENST00000391112 67 ntBASIC3.49□□□□□ -1.85
USP46P62068 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.49□□□□□ -1.85
USP46P62068 AC096949.1-201ENST00000412047 152 ntBASIC3.49□□□□□ -1.85
USP46P62068 MRPL35P3-201ENST00000421557 364 ntBASIC3.49□□□□□ -1.85
USP46P62068 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.49□□□□□ -1.85
USP46P62068 Y_RNA.659-201ENST00000515994 113 ntBASIC3.49□□□□□ -1.85
USP46P62068 MIR5680-201ENST00000577577 84 ntBASIC3.49□□□□□ -1.85
USP46P62068 AC022513.1-201ENST00000624512 117 ntBASIC3.49□□□□□ -1.85
USP46P62068 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
USP46P62068 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
USP46P62068 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.49□□□□□ -1.85
USP46P62068 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.48□□□□□ -1.85
USP46P62068 RNU6-60P-201ENST00000364792 103 ntBASIC3.48□□□□□ -1.85
USP46P62068 MIR1289-1-201ENST00000408836 144 ntBASIC3.48□□□□□ -1.85
USP46P62068 BTF3P4-201ENST00000418852 495 ntBASIC3.48□□□□□ -1.85
USP46P62068 AL445687.1-201ENST00000439946 251 ntBASIC3.48□□□□□ -1.85
USP46P62068 SNORA31.10-201ENST00000516482 106 ntBASIC3.48□□□□□ -1.85
USP46P62068 AC026271.5-201ENST00000577873 130 ntBASIC3.48□□□□□ -1.85
USP46P62068 AC069114.2-201ENST00000604699 304 ntBASIC3.48□□□□□ -1.85
USP46P62068 AC091304.10-201ENST00000641554 121 ntBASIC3.48□□□□□ -1.85
USP46P62068 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
USP46P62068 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
USP46P62068 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
USP46P62068 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
USP46P62068 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
USP46P62068 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.47□□□□□ -1.85
USP46P62068 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.47□□□□□ -1.85
USP46P62068 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
USP46P62068 SNORA38.1-201ENST00000364172 131 ntBASIC3.47□□□□□ -1.85
USP46P62068 SNORD45B-201ENST00000364617 72 ntBASIC3.47□□□□□ -1.85
USP46P62068 RNU6-616P-201ENST00000384353 107 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 153.7 ms