Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.7□□□□□ -2.14
CDH12P55289 MRPS17P9-201ENST00000511924 393 ntBASIC1.7□□□□□ -2.14
CDH12P55289 MIR4419B-201ENST00000577260 68 ntBASIC1.7□□□□□ -2.14
CDH12P55289 MIR4709-201ENST00000577272 72 ntBASIC1.7□□□□□ -2.14
CDH12P55289 AC024614.2-201ENST00000577584 372 ntBASIC1.7□□□□□ -2.14
CDH12P55289 MIR4762-201ENST00000585261 75 ntBASIC1.7□□□□□ -2.14
CDH12P55289 SNORA28-201ENST00000606769 126 ntBASIC1.7□□□□□ -2.14
CDH12P55289 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CDH12P55289 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.69□□□□□ -2.14
CDH12P55289 Y_RNA.233-201ENST00000364407 101 ntBASIC1.69□□□□□ -2.14
CDH12P55289 MT-TR-201ENST00000387439 65 ntBASIC1.69□□□□□ -2.14
CDH12P55289 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CDH12P55289 RNU6-360P-201ENST00000390944 104 ntBASIC1.69□□□□□ -2.14
CDH12P55289 AL034345.1-201ENST00000407768 123 ntBASIC1.69□□□□□ -2.14
CDH12P55289 CALM2P4-201ENST00000430810 426 ntBASIC1.69□□□□□ -2.14
CDH12P55289 FTH1P12-201ENST00000432137 551 ntBASIC1.69□□□□□ -2.14
CDH12P55289 SNORA59A-201ENST00000459326 152 ntBASIC1.69□□□□□ -2.14
CDH12P55289 RNU7-120P-201ENST00000459334 63 ntBASIC1.69□□□□□ -2.14
CDH12P55289 RNU6-1219P-201ENST00000516143 112 ntBASIC1.69□□□□□ -2.14
CDH12P55289 RNU6-1007P-201ENST00000516586 107 ntBASIC1.69□□□□□ -2.14
CDH12P55289 RNU6-1116P-201ENST00000517269 99 ntBASIC1.69□□□□□ -2.14
CDH12P55289 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.69□□□□□ -2.14
CDH12P55289 AL391903.3-201ENST00000612158 163 ntBASIC1.69□□□□□ -2.14
CDH12P55289 uc_338.4-201ENST00000616635 176 ntBASIC1.69□□□□□ -2.14
CDH12P55289 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
CDH12P55289 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
CDH12P55289 Y_RNA.121-201ENST00000363309 113 ntBASIC1.68□□□□□ -2.14
CDH12P55289 RNU6-103P-201ENST00000363686 107 ntBASIC1.68□□□□□ -2.14
CDH12P55289 RNU6-682P-201ENST00000363843 106 ntBASIC1.68□□□□□ -2.14
CDH12P55289 RNU4-70P-201ENST00000384579 139 ntBASIC1.68□□□□□ -2.14
CDH12P55289 MIR676-201ENST00000390702 67 ntBASIC1.68□□□□□ -2.14
CDH12P55289 Y_RNA.587-201ENST00000391210 103 ntBASIC1.68□□□□□ -2.14
CDH12P55289 U8.16-201ENST00000391279 133 ntBASIC1.68□□□□□ -2.14
CDH12P55289 AL606845.1-201ENST00000404881 255 ntBASIC1.68□□□□□ -2.14
CDH12P55289 PIGPP3-201ENST00000425307 415 ntBASIC1.68□□□□□ -2.14
CDH12P55289 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.68□□□□□ -2.14
CDH12P55289 RNU6-561P-201ENST00000516222 102 ntBASIC1.68□□□□□ -2.14
CDH12P55289 RNU6-182P-201ENST00000516970 105 ntBASIC1.68□□□□□ -2.14
CDH12P55289 MIR4648-201ENST00000580107 72 ntBASIC1.68□□□□□ -2.14
CDH12P55289 MIR4744-201ENST00000581563 82 ntBASIC1.68□□□□□ -2.14
CDH12P55289 AC072026.1-201ENST00000605023 201 ntBASIC1.68□□□□□ -2.14
CDH12P55289 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.68□□□□□ -2.14
CDH12P55289 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CDH12P55289 Y_RNA.182-201ENST00000363880 111 ntBASIC1.67□□□□□ -2.14
CDH12P55289 SNORD50B-201ENST00000364995 70 ntBASIC1.67□□□□□ -2.14
CDH12P55289 Y_RNA.412-201ENST00000384001 104 ntBASIC1.67□□□□□ -2.14
CDH12P55289 RNU6-203P-201ENST00000384038 104 ntBASIC1.67□□□□□ -2.14
CDH12P55289 RNU6-424P-201ENST00000384367 105 ntBASIC1.67□□□□□ -2.14
CDH12P55289 RNU6-131P-201ENST00000391144 107 ntBASIC1.67□□□□□ -2.14
CDH12P55289 RN7SKP51-201ENST00000410781 304 ntBASIC1.67□□□□□ -2.14
CDH12P55289 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.67□□□□□ -2.14
CDH12P55289 RPL23AP6-201ENST00000446637 472 ntBASIC1.67□□□□□ -2.14
CDH12P55289 RNA5SP168-201ENST00000516642 112 ntBASIC1.67□□□□□ -2.14
CDH12P55289 RNU6-861P-201ENST00000516745 106 ntBASIC1.67□□□□□ -2.14
CDH12P55289 MIR4713-201ENST00000582691 75 ntBASIC1.67□□□□□ -2.14
CDH12P55289 AC108706.1-201ENST00000611053 297 ntBASIC1.67□□□□□ -2.14
CDH12P55289 AC095038.3-201ENST00000634439 195 ntBASIC1.67□□□□□ -2.14
CDH12P55289 U6.106-201ENST00000636360 105 ntBASIC1.67□□□□□ -2.14
CDH12P55289 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.67□□□□□ -2.14
CDH12P55289 U8.2-201ENST00000363156 134 ntBASIC1.66□□□□□ -2.14
CDH12P55289 RNU6-578P-201ENST00000390980 103 ntBASIC1.66□□□□□ -2.14
CDH12P55289 SNORD72-201ENST00000390994 80 ntBASIC1.66□□□□□ -2.14
CDH12P55289 RNU6-1228P-201ENST00000391014 107 ntBASIC1.66□□□□□ -2.14
CDH12P55289 AC019129.1-201ENST00000403786 261 ntBASIC1.66□□□□□ -2.14
CDH12P55289 AL445685.2-201ENST00000422551 342 ntBASIC1.66□□□□□ -2.14
CDH12P55289 AC003989.2-201ENST00000440224 169 ntBASIC1.66□□□□□ -2.14
CDH12P55289 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.66□□□□□ -2.14
CDH12P55289 Y_RNA.797-201ENST00000515977 94 ntBASIC1.66□□□□□ -2.14
CDH12P55289 SNORD77.4-201ENST00000516158 81 ntBASIC1.66□□□□□ -2.14
CDH12P55289 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.66□□□□□ -2.14
CDH12P55289 MIR3122-201ENST00000577243 73 ntBASIC1.66□□□□□ -2.14
CDH12P55289 MIR3618-201ENST00000580330 88 ntBASIC1.66□□□□□ -2.14
CDH12P55289 AC008507.4-201ENST00000585464 127 ntBASIC1.66□□□□□ -2.14
CDH12P55289 FTX_2.1-201ENST00000618816 94 ntBASIC1.66□□□□□ -2.14
CDH12P55289 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CDH12P55289 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.65□□□□□ -2.15
CDH12P55289 RNY3P5-201ENST00000384127 102 ntBASIC1.65□□□□□ -2.15
CDH12P55289 MIR194-1-201ENST00000384892 85 ntBASIC1.65□□□□□ -2.15
CDH12P55289 Y_RNA.622-201ENST00000411091 108 ntBASIC1.65□□□□□ -2.15
CDH12P55289 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.65□□□□□ -2.15
CDH12P55289 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.65□□□□□ -2.15
CDH12P55289 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.65□□□□□ -2.15
CDH12P55289 SNRPGP8-201ENST00000454064 226 ntBASIC1.65□□□□□ -2.15
CDH12P55289 RNU7-149P-201ENST00000516739 59 ntBASIC1.65□□□□□ -2.15
CDH12P55289 AC109810.1-201ENST00000534066 224 ntBASIC1.65□□□□□ -2.15
CDH12P55289 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.65□□□□□ -2.15
CDH12P55289 MIR4513-201ENST00000581077 86 ntBASIC1.65□□□□□ -2.15
CDH12P55289 AC120024.3-201ENST00000603167 156 ntBASIC1.65□□□□□ -2.15
CDH12P55289 AC103810.8-201ENST00000607347 118 ntBASIC1.65□□□□□ -2.15
CDH12P55289 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CDH12P55289 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
CDH12P55289 RNU6-661P-201ENST00000362409 107 ntBASIC1.64□□□□□ -2.15
CDH12P55289 Y_RNA.75-201ENST00000362927 97 ntBASIC1.64□□□□□ -2.15
CDH12P55289 Y_RNA.150-201ENST00000363562 102 ntBASIC1.64□□□□□ -2.15
CDH12P55289 RNU6-275P-201ENST00000364910 107 ntBASIC1.64□□□□□ -2.15
CDH12P55289 SNORD48-201ENST00000364953 64 ntBASIC1.64□□□□□ -2.15
CDH12P55289 PCNPP3-201ENST00000393579 471 ntBASIC1.64□□□□□ -2.15
CDH12P55289 AL161935.2-201ENST00000414627 60 ntBASIC1.64□□□□□ -2.15
CDH12P55289 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.64□□□□□ -2.15
CDH12P55289 PGBD4P5-201ENST00000445958 426 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms