Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC026436.1-201ENST00000510537 270 ntBASIC2.63□□□□□ -1.99
PMS1P54277 RNU6-693P-201ENST00000516134 107 ntBASIC2.63□□□□□ -1.99
PMS1P54277 Y_RNA.686-201ENST00000516548 134 ntBASIC2.63□□□□□ -1.99
PMS1P54277 MIR4762-201ENST00000585261 75 ntBASIC2.63□□□□□ -1.99
PMS1P54277 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PMS1P54277 AC016717.2-201ENST00000609089 5141 ntBASIC2.62□□□□□ -1.99
PMS1P54277 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PMS1P54277 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PMS1P54277 RNU6-888P-201ENST00000363010 101 ntBASIC2.62□□□□□ -1.99
PMS1P54277 SNORD50B-201ENST00000364995 70 ntBASIC2.62□□□□□ -1.99
PMS1P54277 snoU2-30.1-201ENST00000365012 70 ntBASIC2.62□□□□□ -1.99
PMS1P54277 RNU6-442P-201ENST00000383968 104 ntBASIC2.62□□□□□ -1.99
PMS1P54277 SNORA1-201ENST00000384107 130 ntBASIC2.62□□□□□ -1.99
PMS1P54277 MIR518A2-201ENST00000384966 87 ntBASIC2.62□□□□□ -1.99
PMS1P54277 MIR524-201ENST00000385242 87 ntBASIC2.62□□□□□ -1.99
PMS1P54277 RNU6-440P-201ENST00000390882 105 ntBASIC2.62□□□□□ -1.99
PMS1P54277 RNA5SP465-201ENST00000391195 109 ntBASIC2.62□□□□□ -1.99
PMS1P54277 STAG3L5P-204ENST00000443759 179 ntBASIC2.62□□□□□ -1.99
PMS1P54277 AC046143.2-201ENST00000609789 160 ntBASIC2.62□□□□□ -1.99
PMS1P54277 MIR8054-201ENST00000620877 86 ntBASIC2.62□□□□□ -1.99
PMS1P54277 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
PMS1P54277 MIR1283-2-201ENST00000408621 87 ntBASIC2.61□□□□□ -1.99
PMS1P54277 HMGN2P3-201ENST00000433603 273 ntBASIC2.61□□□□□ -1.99
PMS1P54277 HMGN2P5-201ENST00000436882 273 ntBASIC2.61□□□□□ -1.99
PMS1P54277 RNA5SP402-201ENST00000517148 110 ntBASIC2.61□□□□□ -1.99
PMS1P54277 AC074050.1-201ENST00000563247 211 ntBASIC2.61□□□□□ -1.99
PMS1P54277 AC103810.6-201ENST00000606708 136 ntBASIC2.61□□□□□ -1.99
PMS1P54277 SNORA28-201ENST00000606769 126 ntBASIC2.61□□□□□ -1.99
PMS1P54277 MIR1291-201ENST00000627649 87 ntBASIC2.61□□□□□ -1.99
PMS1P54277 FO624990.1-201ENST00000636373 85 ntBASIC2.61□□□□□ -1.99
PMS1P54277 AC080100.1-201ENST00000624239 5356 ntBASIC2.6□□□□□ -1.99
PMS1P54277 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PMS1P54277 ICE2P2-201ENST00000483823 2787 ntBASIC2.6□□□□□ -1.99
PMS1P54277 Y_RNA.52-201ENST00000362760 96 ntBASIC2.6□□□□□ -1.99
PMS1P54277 SNORA5B-201ENST00000363786 132 ntBASIC2.6□□□□□ -1.99
PMS1P54277 Y_RNA.294-201ENST00000364916 102 ntBASIC2.6□□□□□ -1.99
PMS1P54277 HMGN2P39-201ENST00000398005 273 ntBASIC2.6□□□□□ -1.99
PMS1P54277 Y_RNA.629-201ENST00000411368 105 ntBASIC2.6□□□□□ -1.99
PMS1P54277 MTATP6P29-201ENST00000415057 132 ntBASIC2.6□□□□□ -1.99
PMS1P54277 Y_RNA.690-201ENST00000516603 95 ntBASIC2.6□□□□□ -1.99
PMS1P54277 SNORD45.4-201ENST00000516629 73 ntBASIC2.6□□□□□ -1.99
PMS1P54277 SNORA31.15-201ENST00000516771 132 ntBASIC2.6□□□□□ -1.99
PMS1P54277 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.6□□□□□ -1.99
PMS1P54277 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PMS1P54277 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.59□□□□□ -1.99
PMS1P54277 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.59□□□□□ -1.99
PMS1P54277 RNU6-1292P-201ENST00000383856 107 ntBASIC2.59□□□□□ -1.99
PMS1P54277 RNA5SP270-201ENST00000411361 118 ntBASIC2.59□□□□□ -1.99
PMS1P54277 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.59□□□□□ -1.99
PMS1P54277 RNU5E-3P-201ENST00000515913 68 ntBASIC2.59□□□□□ -1.99
PMS1P54277 RN7SKP179-201ENST00000516126 217 ntBASIC2.59□□□□□ -1.99
PMS1P54277 AC090049.2-201ENST00000550377 109 ntBASIC2.59□□□□□ -1.99
PMS1P54277 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.59□□□□□ -1.99
PMS1P54277 AL136360.1-201ENST00000503377 1900 ntBASIC2.59□□□□□ -1.99
PMS1P54277 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
PMS1P54277 RNU6-235P-201ENST00000362644 107 ntBASIC2.58□□□□□ -2
PMS1P54277 RNU1-138P-201ENST00000384093 164 ntBASIC2.58□□□□□ -2
PMS1P54277 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.58□□□□□ -2
PMS1P54277 MIR891A-201ENST00000401237 79 ntBASIC2.58□□□□□ -2
PMS1P54277 AL603914.1-201ENST00000401964 204 ntBASIC2.58□□□□□ -2
PMS1P54277 MIR548O-201ENST00000408583 114 ntBASIC2.58□□□□□ -2
PMS1P54277 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.58□□□□□ -2
PMS1P54277 RNU7-107P-201ENST00000459121 61 ntBASIC2.58□□□□□ -2
PMS1P54277 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.58□□□□□ -2
PMS1P54277 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.58□□□□□ -2
PMS1P54277 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PMS1P54277 SNORA80E-201ENST00000384744 137 ntBASIC2.57□□□□□ -2
PMS1P54277 RN7SKP200-201ENST00000410564 320 ntBASIC2.57□□□□□ -2
PMS1P54277 MTATP6P21-201ENST00000440681 189 ntBASIC2.57□□□□□ -2
PMS1P54277 AC011753.1-201ENST00000451001 220 ntBASIC2.57□□□□□ -2
PMS1P54277 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.57□□□□□ -2
PMS1P54277 RNVU1-2-201ENST00000516326 135 ntBASIC2.57□□□□□ -2
PMS1P54277 RNU6-659P-201ENST00000516454 104 ntBASIC2.57□□□□□ -2
PMS1P54277 AC006441.5-201ENST00000612680 209 ntBASIC2.57□□□□□ -2
PMS1P54277 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.57□□□□□ -2
PMS1P54277 Y_RNA.336-201ENST00000365307 109 ntBASIC2.56□□□□□ -2
PMS1P54277 RNU6-950P-201ENST00000384651 107 ntBASIC2.56□□□□□ -2
PMS1P54277 MIR548A2-201ENST00000384956 97 ntBASIC2.56□□□□□ -2
PMS1P54277 MIR518F-201ENST00000384973 87 ntBASIC2.56□□□□□ -2
PMS1P54277 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.56□□□□□ -2
PMS1P54277 RNU2-7P-201ENST00000410794 178 ntBASIC2.56□□□□□ -2
PMS1P54277 AL158823.1-201ENST00000418441 478 ntBASIC2.56□□□□□ -2
PMS1P54277 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.56□□□□□ -2
PMS1P54277 HMGN2P32-201ENST00000444648 269 ntBASIC2.56□□□□□ -2
PMS1P54277 AC234781.5-201ENST00000508429 271 ntBASIC2.56□□□□□ -2
PMS1P54277 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.56□□□□□ -2
PMS1P54277 SNORA31.10-201ENST00000516482 106 ntBASIC2.56□□□□□ -2
PMS1P54277 RNU2-60P-201ENST00000517290 128 ntBASIC2.56□□□□□ -2
PMS1P54277 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.56□□□□□ -2
PMS1P54277 MIR3121-201ENST00000579680 77 ntBASIC2.56□□□□□ -2
PMS1P54277 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.56□□□□□ -2
PMS1P54277 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PMS1P54277 RNU6-268P-201ENST00000364174 107 ntBASIC2.55□□□□□ -2
PMS1P54277 Y_RNA.273-201ENST00000364703 102 ntBASIC2.55□□□□□ -2
PMS1P54277 RNU6-163P-201ENST00000384396 106 ntBASIC2.55□□□□□ -2
PMS1P54277 SNORA48.1-201ENST00000390879 135 ntBASIC2.55□□□□□ -2
PMS1P54277 AL034345.1-201ENST00000407768 123 ntBASIC2.55□□□□□ -2
PMS1P54277 AF228730.3-201ENST00000436691 102 ntBASIC2.55□□□□□ -2
PMS1P54277 HSPE1P9-201ENST00000440046 311 ntBASIC2.55□□□□□ -2
PMS1P54277 RNU7-193P-201ENST00000516723 65 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms