Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 MIR4635-201ENST00000583759 79 ntBASIC2.66□□□□□ -1.98
CCNFP41002 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCNFP41002 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CCNFP41002 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.65□□□□□ -1.98
CCNFP41002 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CCNFP41002 RNU6-1019P-201ENST00000364424 107 ntBASIC2.65□□□□□ -1.99
CCNFP41002 RNU6-309P-201ENST00000364573 106 ntBASIC2.65□□□□□ -1.99
CCNFP41002 RNA5SP482-201ENST00000391269 118 ntBASIC2.65□□□□□ -1.99
CCNFP41002 MIR1283-2-201ENST00000408621 87 ntBASIC2.65□□□□□ -1.99
CCNFP41002 RNA5SP181-201ENST00000410246 98 ntBASIC2.65□□□□□ -1.99
CCNFP41002 HMGN2P3-201ENST00000433603 273 ntBASIC2.65□□□□□ -1.99
CCNFP41002 HMGN2P5-201ENST00000436882 273 ntBASIC2.65□□□□□ -1.99
CCNFP41002 RNU6-1061P-201ENST00000516530 99 ntBASIC2.65□□□□□ -1.99
CCNFP41002 SNORD45.4-201ENST00000516629 73 ntBASIC2.65□□□□□ -1.99
CCNFP41002 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.65□□□□□ -1.99
CCNFP41002 AL137847.3-201ENST00000611521 109 ntBASIC2.65□□□□□ -1.99
CCNFP41002 MIR8054-201ENST00000620877 86 ntBASIC2.65□□□□□ -1.99
CCNFP41002 AC007336.1-201ENST00000576365 3828 ntBASIC2.65□□□□□ -1.99
CCNFP41002 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.64□□□□□ -1.99
CCNFP41002 MIR6073-201ENST00000352083 89 ntBASIC2.64□□□□□ -1.99
CCNFP41002 RNU6-888P-201ENST00000363010 101 ntBASIC2.64□□□□□ -1.99
CCNFP41002 Y_RNA.114-201ENST00000363265 113 ntBASIC2.64□□□□□ -1.99
CCNFP41002 Y_RNA.273-201ENST00000364703 102 ntBASIC2.64□□□□□ -1.99
CCNFP41002 Y_RNA.353-201ENST00000365440 108 ntBASIC2.64□□□□□ -1.99
CCNFP41002 SNORD24-201ENST00000383884 75 ntBASIC2.64□□□□□ -1.99
CCNFP41002 RNA5SP210-201ENST00000391034 120 ntBASIC2.64□□□□□ -1.99
CCNFP41002 AL158823.1-201ENST00000418441 478 ntBASIC2.64□□□□□ -1.99
CCNFP41002 RNU2-60P-201ENST00000517290 128 ntBASIC2.64□□□□□ -1.99
CCNFP41002 AL049779.4-201ENST00000604500 156 ntBASIC2.64□□□□□ -1.99
CCNFP41002 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.64□□□□□ -1.99
CCNFP41002 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CCNFP41002 SNORA3A-201ENST00000364113 130 ntBASIC2.63□□□□□ -1.99
CCNFP41002 AL603914.1-201ENST00000401964 204 ntBASIC2.63□□□□□ -1.99
CCNFP41002 MIR548O-201ENST00000408583 114 ntBASIC2.63□□□□□ -1.99
CCNFP41002 RNU6-1116P-201ENST00000517269 99 ntBASIC2.63□□□□□ -1.99
CCNFP41002 MIR3162-201ENST00000581818 82 ntBASIC2.63□□□□□ -1.99
CCNFP41002 AC104984.5-201ENST00000586878 94 ntBASIC2.63□□□□□ -1.99
CCNFP41002 AL391516.1-201ENST00000554380 2449 ntBASIC2.63□□□□□ -1.99
CCNFP41002 MTND5P32-201ENST00000560711 1802 ntBASIC2.63□□□□□ -1.99
CCNFP41002 RNU1-112P-201ENST00000364401 164 ntBASIC2.62□□□□□ -1.99
CCNFP41002 RNU1-138P-201ENST00000384093 164 ntBASIC2.62□□□□□ -1.99
CCNFP41002 RNU6-163P-201ENST00000384396 106 ntBASIC2.62□□□□□ -1.99
CCNFP41002 SNORA80E-201ENST00000384744 137 ntBASIC2.62□□□□□ -1.99
CCNFP41002 MIR548A2-201ENST00000384956 97 ntBASIC2.62□□□□□ -1.99
CCNFP41002 RNU2-7P-201ENST00000410794 178 ntBASIC2.62□□□□□ -1.99
CCNFP41002 MTATP6P21-201ENST00000440681 189 ntBASIC2.62□□□□□ -1.99
CCNFP41002 AL158147.1-201ENST00000443970 75 ntBASIC2.62□□□□□ -1.99
CCNFP41002 RNU6-772P-201ENST00000516042 105 ntBASIC2.62□□□□□ -1.99
CCNFP41002 RNU7-28P-201ENST00000516759 62 ntBASIC2.62□□□□□ -1.99
CCNFP41002 RNA5SP402-201ENST00000517148 110 ntBASIC2.62□□□□□ -1.99
CCNFP41002 MIR3121-201ENST00000579680 77 ntBASIC2.62□□□□□ -1.99
CCNFP41002 MIR5092-201ENST00000583139 88 ntBASIC2.62□□□□□ -1.99
CCNFP41002 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.62□□□□□ -1.99
CCNFP41002 AL022345.2-201ENST00000606307 135 ntBASIC2.62□□□□□ -1.99
CCNFP41002 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CCNFP41002 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCNFP41002 Z82195.2-201ENST00000612348 18351 ntBASIC2.62□□□□□ -1.99
CCNFP41002 Y_RNA.81-201ENST00000362997 102 ntBASIC2.61□□□□□ -1.99
CCNFP41002 MIR518F-201ENST00000384973 87 ntBASIC2.61□□□□□ -1.99
CCNFP41002 MIR891A-201ENST00000401237 79 ntBASIC2.61□□□□□ -1.99
CCNFP41002 SUMO1P4-201ENST00000429430 302 ntBASIC2.61□□□□□ -1.99
CCNFP41002 AF228730.3-201ENST00000436691 102 ntBASIC2.61□□□□□ -1.99
CCNFP41002 RNA5SP282-201ENST00000516355 108 ntBASIC2.61□□□□□ -1.99
CCNFP41002 RNU7-25P-201ENST00000516544 62 ntBASIC2.61□□□□□ -1.99
CCNFP41002 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCNFP41002 AC079600.2-201ENST00000550076 130 ntBASIC2.61□□□□□ -1.99
CCNFP41002 GTF3AP2-201ENST00000557014 266 ntBASIC2.61□□□□□ -1.99
CCNFP41002 MIR4529-201ENST00000578110 78 ntBASIC2.61□□□□□ -1.99
CCNFP41002 MIR4762-201ENST00000585261 75 ntBASIC2.61□□□□□ -1.99
CCNFP41002 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.61□□□□□ -1.99
CCNFP41002 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.61□□□□□ -1.99
CCNFP41002 RNU6-859P-201ENST00000362728 107 ntBASIC2.6□□□□□ -1.99
CCNFP41002 U8.5-201ENST00000364528 136 ntBASIC2.6□□□□□ -1.99
CCNFP41002 RNU6-1325P-201ENST00000364905 105 ntBASIC2.6□□□□□ -1.99
CCNFP41002 RNU6-1056P-201ENST00000383996 107 ntBASIC2.6□□□□□ -1.99
CCNFP41002 SNORD77.3-201ENST00000391113 65 ntBASIC2.6□□□□□ -1.99
CCNFP41002 RPS12P2-201ENST00000439728 269 ntBASIC2.6□□□□□ -1.99
CCNFP41002 HSPE1P9-201ENST00000440046 311 ntBASIC2.6□□□□□ -1.99
CCNFP41002 AC069257.2-201ENST00000441819 155 ntBASIC2.6□□□□□ -1.99
CCNFP41002 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.6□□□□□ -1.99
CCNFP41002 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.6□□□□□ -1.99
CCNFP41002 AC114811.1-201ENST00000507207 168 ntBASIC2.6□□□□□ -1.99
CCNFP41002 RNVU1-2-201ENST00000516326 135 ntBASIC2.6□□□□□ -1.99
CCNFP41002 SNORA31.11-201ENST00000516528 139 ntBASIC2.6□□□□□ -1.99
CCNFP41002 RNU6-1149P-201ENST00000516810 97 ntBASIC2.6□□□□□ -1.99
CCNFP41002 SNORA31.25-201ENST00000517242 134 ntBASIC2.6□□□□□ -1.99
CCNFP41002 MTND5P34-201ENST00000568888 325 ntBASIC2.6□□□□□ -1.99
CCNFP41002 AL033523.1-201ENST00000605153 153 ntBASIC2.6□□□□□ -1.99
CCNFP41002 SNORA28-201ENST00000606769 126 ntBASIC2.6□□□□□ -1.99
CCNFP41002 AC245884.12-201ENST00000615364 59 ntBASIC2.6□□□□□ -1.99
CCNFP41002 AC015726.2-201ENST00000620112 122 ntBASIC2.6□□□□□ -1.99
CCNFP41002 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCNFP41002 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCNFP41002 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCNFP41002 RNU6-268P-201ENST00000364174 107 ntBASIC2.59□□□□□ -1.99
CCNFP41002 RNU6-1292P-201ENST00000383856 107 ntBASIC2.59□□□□□ -1.99
CCNFP41002 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CCNFP41002 SNORA31.10-201ENST00000516482 106 ntBASIC2.59□□□□□ -1.99
CCNFP41002 RNU7-193P-201ENST00000516723 65 ntBASIC2.59□□□□□ -1.99
CCNFP41002 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms