Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AP001340.1-201ENST00000624405 217 ntBASIC2.51□□□□□ -2.01
LTBRP36941 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.51□□□□□ -2.01
LTBRP36941 MIR1291-201ENST00000627649 87 ntBASIC2.51□□□□□ -2.01
LTBRP36941 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LTBRP36941 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LTBRP36941 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.5□□□□□ -2.01
LTBRP36941 Y_RNA.242-201ENST00000364473 110 ntBASIC2.5□□□□□ -2.01
LTBRP36941 RNA5SP465-201ENST00000391195 109 ntBASIC2.5□□□□□ -2.01
LTBRP36941 RNA5SP482-201ENST00000391269 118 ntBASIC2.5□□□□□ -2.01
LTBRP36941 RN7SL499P-201ENST00000481141 276 ntBASIC2.5□□□□□ -2.01
LTBRP36941 RNU6-313P-201ENST00000516317 112 ntBASIC2.5□□□□□ -2.01
LTBRP36941 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.5□□□□□ -2.01
LTBRP36941 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.5□□□□□ -2.01
LTBRP36941 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LTBRP36941 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LTBRP36941 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LTBRP36941 U8.5-201ENST00000364528 136 ntBASIC2.49□□□□□ -2.01
LTBRP36941 RNU6-915P-201ENST00000364943 103 ntBASIC2.49□□□□□ -2.01
LTBRP36941 RNU6-440P-201ENST00000390882 105 ntBASIC2.49□□□□□ -2.01
LTBRP36941 RNA5SP210-201ENST00000391034 120 ntBASIC2.49□□□□□ -2.01
LTBRP36941 HMGN2P39-201ENST00000398005 273 ntBASIC2.49□□□□□ -2.01
LTBRP36941 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.49□□□□□ -2.01
LTBRP36941 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.49□□□□□ -2.01
LTBRP36941 STAG3L5P-204ENST00000443759 179 ntBASIC2.49□□□□□ -2.01
LTBRP36941 Y_RNA.666-201ENST00000516187 112 ntBASIC2.49□□□□□ -2.01
LTBRP36941 RNU7-28P-201ENST00000516759 62 ntBASIC2.49□□□□□ -2.01
LTBRP36941 RNU6-1270P-201ENST00000517128 108 ntBASIC2.49□□□□□ -2.01
LTBRP36941 MIR4762-201ENST00000585261 75 ntBASIC2.49□□□□□ -2.01
LTBRP36941 U7.2-201ENST00000607576 63 ntBASIC2.49□□□□□ -2.01
LTBRP36941 MIR8054-201ENST00000620877 86 ntBASIC2.49□□□□□ -2.01
LTBRP36941 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
LTBRP36941 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.48□□□□□ -2.01
LTBRP36941 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
LTBRP36941 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LTBRP36941 RNU6-1084P-201ENST00000362498 107 ntBASIC2.48□□□□□ -2.01
LTBRP36941 SNORD61-201ENST00000384252 73 ntBASIC2.48□□□□□ -2.01
LTBRP36941 SNORA64-201ENST00000384674 134 ntBASIC2.48□□□□□ -2.01
LTBRP36941 RNU6-1168P-201ENST00000390831 104 ntBASIC2.48□□□□□ -2.01
LTBRP36941 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.48□□□□□ -2.01
LTBRP36941 RNA5SP270-201ENST00000411361 118 ntBASIC2.48□□□□□ -2.01
LTBRP36941 AC008267.6-201ENST00000441664 139 ntBASIC2.48□□□□□ -2.01
LTBRP36941 AC069257.2-201ENST00000441819 155 ntBASIC2.48□□□□□ -2.01
LTBRP36941 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.48□□□□□ -2.01
LTBRP36941 RNVU1-2-201ENST00000516326 135 ntBASIC2.48□□□□□ -2.01
LTBRP36941 SNORA18.4-201ENST00000516440 124 ntBASIC2.48□□□□□ -2.01
LTBRP36941 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.48□□□□□ -2.01
LTBRP36941 AC131055.1-201ENST00000584626 316 ntBASIC2.48□□□□□ -2.01
LTBRP36941 SNORD14A-201ENST00000606526 91 ntBASIC2.48□□□□□ -2.01
LTBRP36941 MIR6873-201ENST00000622788 63 ntBASIC2.48□□□□□ -2.01
LTBRP36941 Y_RNA.71-201ENST00000362892 104 ntBASIC2.47□□□□□ -2.01
LTBRP36941 SNORD14E-201ENST00000364009 85 ntBASIC2.47□□□□□ -2.01
LTBRP36941 Y_RNA.218-201ENST00000364218 104 ntBASIC2.47□□□□□ -2.01
LTBRP36941 SNORD50B-201ENST00000364995 70 ntBASIC2.47□□□□□ -2.01
LTBRP36941 snoU2-30.1-201ENST00000365012 70 ntBASIC2.47□□□□□ -2.01
LTBRP36941 Y_RNA.338-201ENST00000365320 114 ntBASIC2.47□□□□□ -2.01
LTBRP36941 SNORD24-201ENST00000383884 75 ntBASIC2.47□□□□□ -2.01
LTBRP36941 SNORA22C-201ENST00000384614 134 ntBASIC2.47□□□□□ -2.01
LTBRP36941 RNA5SP127-201ENST00000411051 133 ntBASIC2.47□□□□□ -2.01
LTBRP36941 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.47□□□□□ -2.01
LTBRP36941 RPL39P40-201ENST00000445481 146 ntBASIC2.47□□□□□ -2.01
LTBRP36941 RNU6-1234P-201ENST00000516877 103 ntBASIC2.47□□□□□ -2.01
LTBRP36941 RNU1-104P-201ENST00000517280 175 ntBASIC2.47□□□□□ -2.01
LTBRP36941 MIR3129-201ENST00000581095 76 ntBASIC2.47□□□□□ -2.01
LTBRP36941 AL365205.2-201ENST00000594586 68 ntBASIC2.47□□□□□ -2.01
LTBRP36941 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LTBRP36941 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LTBRP36941 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.47□□□□□ -2.01
LTBRP36941 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
LTBRP36941 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
LTBRP36941 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.46□□□□□ -2.01
LTBRP36941 SNORA1-201ENST00000384107 130 ntBASIC2.46□□□□□ -2.02
LTBRP36941 HMGN2P35-201ENST00000412164 270 ntBASIC2.46□□□□□ -2.02
LTBRP36941 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.46□□□□□ -2.02
LTBRP36941 SNRPGP13-201ENST00000442212 177 ntBASIC2.46□□□□□ -2.02
LTBRP36941 RPL23AP42-201ENST00000471152 471 ntBASIC2.46□□□□□ -2.02
LTBRP36941 RNU6-693P-201ENST00000516134 107 ntBASIC2.46□□□□□ -2.02
LTBRP36941 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.46□□□□□ -2.02
LTBRP36941 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LTBRP36941 SNORA28-201ENST00000606769 126 ntBASIC2.46□□□□□ -2.02
LTBRP36941 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.46□□□□□ -2.02
LTBRP36941 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
LTBRP36941 U8.1-201ENST00000362843 134 ntBASIC2.45□□□□□ -2.02
LTBRP36941 RNU6-888P-201ENST00000363010 101 ntBASIC2.45□□□□□ -2.02
LTBRP36941 Y_RNA.120-201ENST00000363304 110 ntBASIC2.45□□□□□ -2.02
LTBRP36941 RNU6-442P-201ENST00000383968 104 ntBASIC2.45□□□□□ -2.02
LTBRP36941 SNORA67.3-201ENST00000384366 140 ntBASIC2.45□□□□□ -2.02
LTBRP36941 MIR624-201ENST00000385217 97 ntBASIC2.45□□□□□ -2.02
LTBRP36941 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
LTBRP36941 HSPE1P9-201ENST00000440046 311 ntBASIC2.45□□□□□ -2.02
LTBRP36941 SNORA31.10-201ENST00000516482 106 ntBASIC2.45□□□□□ -2.02
LTBRP36941 Y_RNA.686-201ENST00000516548 134 ntBASIC2.45□□□□□ -2.02
LTBRP36941 SNORD45.4-201ENST00000516629 73 ntBASIC2.45□□□□□ -2.02
LTBRP36941 AC007336.1-201ENST00000576365 3828 ntBASIC2.45□□□□□ -2.02
LTBRP36941 AP000942.3-201ENST00000603702 160 ntBASIC2.45□□□□□ -2.02
LTBRP36941 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LTBRP36941 Y_RNA.127-201ENST00000363386 109 ntBASIC2.44□□□□□ -2.02
LTBRP36941 Y_RNA.226-201ENST00000364337 114 ntBASIC2.44□□□□□ -2.02
LTBRP36941 Y_RNA.261-201ENST00000364631 102 ntBASIC2.44□□□□□ -2.02
LTBRP36941 SNORD116-14-201ENST00000383894 92 ntBASIC2.44□□□□□ -2.02
LTBRP36941 SNORD116-17-201ENST00000383929 92 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms